Showing : gui • reset
0
votes
12
replies
3.3k
views
problems when trying to use biomaRt
GUI biomaRt GUI biomaRt
updated 14.1 years ago by ★ 2.0k • written 14.1 years ago by ▴ 50
0
votes
7
replies
1.8k
views
recipe for installing and using Bioconductor with Mac OS X 10.3 and R GUI 1.9
GUI GUI
20.0 years ago Marc Salit ▴ 80
0
votes
9
replies
2.0k
views
R IDE editor
GUI GUI
updated 12.0 years ago by ▴ 10 • written 12.0 years ago by ▴ 370
0
votes
5
replies
1.5k
views
Errors using biocLite on Apple OS X
GUI Cancer Breast Biobase GUI Cancer Breast Biobase
17.8 years ago Steven McKinney ▴ 310
0
votes
6
replies
1.6k
views
Re: fileBrowser
GUI cdf GUI cdf
updated 22.1 years ago by ▴ 530 • written 22.1 years ago by ★ 2.9k
0
votes
20
replies
2.8k
views
affy won't load
GUI affy GUI affy
15.9 years ago jason smith ▴ 50
0
votes
3
replies
1.4k
views
Installing Packages from Bioconductor: Error
GUI GUI
updated 19.4 years ago by ▴ 270 • written 19.4 years ago by ▴ 20
0
votes
7
replies
1.2k
views
bioconductor and ESS
GUI GUI
updated 19.1 years ago by ▴ 360 • written 19.1 years ago by ▴ 30
0
votes
3
replies
1.3k
views
maQualityPlots on Mac
GUI arrayQuality marray GUI arrayQuality marray
updated 17.7 years ago by ▴ 300 • written 17.7 years ago by 16k
0
votes
7
replies
1.4k
views
rMAT tutorial. Data file too large?
Preprocessing GUI rMAT Preprocessing GUI rMAT
14.0 years ago Patrick Schorderet ▴ 50
0
votes
3
replies
1.4k
views
An ESR essay about software design, and how it applies to Bioconductor
GUI GUI
written 20.2 years ago by ▴ 50
0
votes
3
replies
1.3k
views
limma: print-tip loess and empty spots
Normalization GO GUI limma limmaGUI Normalization GO GUI limma limmaGUI
16.9 years ago Gordon Smyth 50k
0
votes
2
replies
1.3k
views
"limma" and "Imagene"
GUI limma limmaGUI GUI limma limmaGUI
updated 19.8 years ago by 50k • written 19.8 years ago by ▴ 50
0
votes
2
replies
975
views
newbie Q about object identity
GUI Biobase genefilter GUI Biobase genefilter
updated 16.6 years ago by 25k • written 16.6 years ago by ▴ 20
0
votes
3
replies
1.1k
views
attributes of SAM files
GUI siggenes GUI siggenes
updated 18.5 years ago by 65k • written 18.5 years ago by ▴ 100
0
votes
3
replies
1.3k
views
duplicate correlation of 4 "within array replicates" limmaGUI
GUI limma limmaGUI microRNA GUI limma limmaGUI microRNA
15.6 years ago • updated 15.5 years ago Gordon Smyth 50k
0
votes
3
replies
1.9k
views
Error: 'devel' version requires a more recent R
GUI Cancer easyRNASeq GUI Cancer easyRNASeq
updated 11.5 years ago by 21k • written 11.5 years ago by ★ 2.0k
0
votes
3
replies
1.1k
views
getting closer on YEAST 2.0 annotation...
Annotation GUI Yeast probe Annotation GUI Yeast probe
updated 19.2 years ago by ★ 2.9k • written 19.2 years ago by ▴ 320
0
votes
2
replies
1.2k
views
Problems normalizing scanarray express data with limma
GUI limma a4 GUI limma a4
updated 12.3 years ago by 50k • written 12.3 years ago by ▴ 10
0
votes
3
replies
1.1k
views
R crashes after image array plots hgu133plus2 in R2.6.0
GUI hgu133plus2 affy limma affylmGUI GUI hgu133plus2 affy limma affylmGUI
updated 16.5 years ago by 25k • written 16.5 years ago by ★ 2.0k
0
votes
2
replies
1.3k
views
Installation Problems
GUI GUI
17.7 years ago McGee, Monnie ▴ 300
0
votes
3
replies
778
views
Bioconductor 2.4 is released
GUI GUI
updated 14.8 years ago by ▴ 10 • written 14.8 years ago by ▴ 10
1
vote
2
replies
3.3k
views
edgeR: error in readDGE
GUI edgeR GUI edgeR
updated 13.5 years ago by ★ 13k • written 13.5 years ago by ▴ 10
0
votes
3
replies
2.1k
views
Error: package/namespace load failed for ‘affycoretools
GO GUI Cancer GO GUI Cancer
updated 11.4 years ago by ★ 13k • written 11.4 years ago by ★ 2.0k
0
votes
3
replies
1.2k
views
Database for Microarray Data - request for user stories
Microarray Annotation GUI probe Microarray Annotation GUI probe
updated 18.4 years ago by ▴ 50 • written 18.4 years ago by ▴ 320
0
votes
2
replies
903
views
affy still not working
GUI affy GUI affy
updated 21.2 years ago by ★ 3.9k • written 21.2 years ago by ▴ 20
0
votes
1
reply
1.2k
views
An ESR essay about software design, and how it applies to Bioconductor
GUI Cancer GUI Cancer
written 20.2 years ago by ▴ 810
0
votes
3
replies
1.2k
views
ShortRead report function crash in x86_64-apple
GUI GUI
written 14.0 years ago by ▴ 20
0
votes
1
reply
1.3k
views
iFlow
GUI GUI
updated 14.0 years ago by ★ 1.6k • written 14.0 years ago by ▴ 70
0
votes
1
reply
655
views
Top 50 Candidate genes: "wrong" pValues and B results!
GUI limma GUI limma
updated 19.8 years ago by 50k • written 19.8 years ago by ▴ 30
0
votes
1
reply
1.0k
views
Agi4x44PreProcess - Replicated genes
Annotation GUI probe Agi4x44PreProcess Annotation GUI probe Agi4x44PreProcess
updated 14.5 years ago by ★ 1.3k • written 14.5 years ago by ▴ 460
0
votes
1
reply
885
views
Problems using rMAT tutorial
GUI rMAT GUI rMAT
updated 14.0 years ago by ★ 13k • written 14.0 years ago by ▴ 50
0
votes
1
reply
930
views
iFlow error
GUI iFlow GUI iFlow
updated 14.0 years ago by ★ 1.6k • written 14.0 years ago by ▴ 70
0
votes
1
reply
942
views
Rgraphviz in windows 7 - problem with GUI?
GUI graph Rgraphviz GUI graph Rgraphviz
updated 13.8 years ago by 16k • written 13.8 years ago by ▴ 10
0
votes
1
reply
1.1k
views
asMatrixWeights: weights of unexpected shape
GUI limma limmaGUI GUI limma limmaGUI
updated 15.5 years ago by ▴ 90 • written 15.5 years ago by 50k
0
votes
3
replies
3.5k
views
Error installing impute package
GUI impute DNAcopy GUI impute DNAcopy
updated 9.9 years ago by ★ 8.2k • written 9.9 years ago by ▴ 80
0
votes
1
reply
679
views
GUI designing
GUI GUI
updated 15.2 years ago by ▴ 620 • written 15.2 years ago by ▴ 10
0
votes
2
replies
1.3k
views
An ESR essay about software design, and how it applies to Bioconductor
GUI GUI
updated 19 months ago by • 0 • written 20.2 years ago by ▴ 30
0
votes
1
reply
1.1k
views
FYI from apple employee RE: [R] Memory error in Mac OS X
GUI trigger GUI trigger
updated 19.0 years ago by ▴ 430 • written 19.0 years ago by ▴ 10
0
votes
1
reply
1.1k
views
Error in isVersioned(object)
GUI GUI
updated 10.0 years ago by 25k • written 10.0 years ago by ★ 13k
0
votes
1
reply
769
views
problem upgrading limma on Windows Vista
GUI limma GUI limma
updated 16.1 years ago by 65k • written 16.1 years ago by ▴ 50
0
votes
2
replies
1.6k
views
Help with loading newly created custom annotation db into R session
Annotation GO GUI zebrafish probe Annotation GO GUI zebrafish probe
updated 15.3 years ago by 65k • written 15.3 years ago by ▴ 300
0
votes
1
reply
703
views
Installing R
GO GUI PROcess GO GUI PROcess
updated 19.2 years ago by ▴ 430 • written 19.2 years ago by ▴ 10
0
votes
1
reply
1.1k
views
FYI from apple employee RE: [R] Memory error in Mac OS X Aqua GUI v1.01 with cluster
GUI trigger GUI trigger
updated 19.2 years ago by ▴ 430 • written 19.2 years ago by ▴ 50
0
votes
2
replies
1.3k
views
Memory error in Mac OS X Aqua GUI v1.01 with cluster package functions
GUI trigger GUI trigger
updated 19.2 years ago by 65k • written 19.2 years ago by ▴ 50
0
votes
1
reply
714
views
Error in the Oligo package with pd.mapping50k.xba240
GUI oligo GUI oligo
updated 16.9 years ago by ★ 7.4k • written 16.9 years ago by ▴ 40
0
votes
1
reply
1.1k
views
tkctk widgets
GUI annotate affy GUI annotate affy
updated 22.1 years ago by ★ 2.9k • written 22.1 years ago by ★ 5.5k
0
votes
1
reply
694
views
Problem with limma gui and sma
GUI limma GUI limma
updated 19.5 years ago by 65k • written 19.5 years ago by ▴ 30
0
votes
1
reply
1.1k
views
Re-scaling MA plot Y axis in LimmaGUI?
GUI limma limmaGUI GUI limma limmaGUI
18.4 years ago J.delasHeras@ed.ac.uk ★ 1.9k
0
votes
2
replies
975
views
Error in loading bioconductor packages in Rterm and ESS+XEmacs modes
GUI GUI
updated 21.0 years ago by ★ 3.9k • written 21.1 years ago by ▴ 20
50 results • Page 1 of 1
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Answer: Dominance Index for Shotgun Metagenomics Data by Leo Lahti ▴ 30
1. Note that Simpson's dominance index (\lambda) is a different index than inverse Simpson (1/\lambda) or reciprocal Simpson (1-\lambda). T…
Comment: Math expression in shapeCustom legend in EnhancedVolcano by pl23 • 0
Thank you very much - that worked perfectly! Word of warning to those who try this: it screws up the other legends because of the markdown …
Answer: PCA plot suggestions by Michael Love 41k
For help with interpretation and design of analysis, I recommend working with a local statistician. Due to time restrictions, I can only…
Comment: DESeq2 Error in `.rowNamesDF<-`(x, value = value): Invalid 'row.names' length by ussarizona ▴ 10
Hi Michael, Yes, I could figure it out what does the error mean. In my matrix I had the first colum GeneID while in my condition I only h…
Answer: Deseq2. decontXcounts not integers. Useful alternative? by Michael Love 41k
Another option would be to put the per sample estimated contamination in the design. This is for example how RUV etc help remove spurious D…
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Answer: Math expression in shapeCustom legend in EnhancedVolcano
Comment: DESeq2 Error in `.rowNamesDF<-`(x, value = value): Invalid 'row.names' length
Comment: Deseq2. decontXcounts not integers. Useful alternative?
Comment: Opposite sign of LFC in count plots of DEGs (DESeq2)
biomaRt error: database disk image is malformed
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