Showing : missmethyl • reset
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gsameth GSA: probe annotation to multiple genes
missMethyl gsameth
12 months ago nurkenber • 0
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1
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689
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No preprocessing allowed for EPICv2 with DMRcate
missMethyl DMRcate
updated 13 months ago by 68k • written 13 months ago by • 0
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2
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749
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MissMethyl failed to use gometh function for EPICv2
missMethyl EPICv2manifest
updated 13 months ago by 68k • written 13 months ago by • 0
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2
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1.1k
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DMPs enrichment for MOUSE DNA methylation array
minfi mCSEA missme missMethyl
updated 17 months ago by • 0 • written 17 months ago by • 0
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3
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2.3k
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Error in GOmeth function of missMethyl when EPICv2 annotation is used
DNAMethylation GO MethylationArray missMethyl EPICv2
23 months ago • updated 16 months ago s.malik • 0
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1.2k
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dmrcate needs at least two non-NA values to interpolate
miss DMRcate missMethyl
updated 2.5 years ago by ▴ 230 • written 2.5 years ago by • 0
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1.2k
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ageData (minfi pipeline)
ageData missMethyl differentialvariability minfi
updated 22 months ago by • 0 • written 2.7 years ago by • 0
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1
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1.1k
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urgent error for producing table of topGO() annotated DMPs methylation
methylationArrayAnalysis topGO missMethyl MethylationArrayData MethylationArray
updated 2.8 years ago by ▴ 40 • written 2.8 years ago by • 0
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1.0k
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topGO() analysis of DMPs in missMethyl methylation analysis
DNAMethylation missMethyl Pathways
2.8 years ago Grace • 0
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712
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goMeth
missMethyl
2.9 years ago anmolanp ▴ 10
2
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6
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1.8k
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No enriched GO terms CpGs
DNAMethylation missMethyl
updated 2.9 years ago by ▴ 40 • written 2.9 years ago by • 0
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3
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2.2k
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GSEA for paired methylation data
missMethyl GSEA minfi methylGSA
updated 3.1 years ago by ▴ 40 • written 3.1 years ago by • 0
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6
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2.2k
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Find genes in pathways enrichment
dmrcate enrichment analysis epic array goregion missmethyl
updated 4.6 years ago by ▴ 20 • written 5.6 years ago by ▴ 10
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1.5k
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missMethyl - get names of differentially methylated genes from gometh()
missMethyl
updated 4.6 years ago by ▴ 20 • written 5.4 years ago by ▴ 10
1
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2
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2.5k
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Minfi read.metharray.sheet error
minfi methylation dataimport minfidata missmethyl
updated 7.4 years ago by 68k • written 7.4 years ago by ▴ 20
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1.4k
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missMethyl EPIC manifest update
missmethyl epic illuminahumanmethylationepicanno.ilm10b4.hg19. ruv
7.5 years ago peter.fransquet • 0
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1.2k
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missmethyl gsameth outputs matrix instead of dataframe
missmethyl gsameth
7.6 years ago owen.whitley ▴ 10
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1
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1.9k
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Test for differential variability with missMethyl (DiffVar) using block design
missmethyl diffvar design matrix limma block
updated 7.7 years ago by ▴ 50 • written 8.6 years ago by ▴ 190
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1.3k
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which value from ruvadj in missMethyl can present methylation status
methylation missmethyl RUV batch effect
7.7 years ago RC • 0
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1.6k
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MissMethyl: Sample size and control probes
missmethyl RUV control probes
7.8 years ago Taub, Margaret ▴ 10
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2
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2.0k
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prior.prob has opposite effects in goana and kegga?
limma missMethyl gometh goana kegga
updated 8.6 years ago by 53k • written 8.7 years ago by ★ 2.0k
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3
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1.8k
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Details of gene names in DE
missmethyl
updated 8.8 years ago by 68k • written 8.8 years ago by • 0
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1
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1.8k
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missMethyl package: gsameth bias plots
missmethyl plots bias package
updated 8.9 years ago by ▴ 40 • written 8.9 years ago by • 0
1
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2
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2.2k
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Gene Ontology Overrepresentation Analysis with a custom level of Abstraction of GO Terminology
gene ontology GO overrepresentation analysis missmethyl gostats
updated 9.5 years ago by 68k • written 9.5 years ago by • 0
1
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3
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3.8k
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Pathway analysis of differentially methylated CpGs
limma missmethyl
9.9 years ago philipp24 ▴ 30
3
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3
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4.5k
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missMethyl: Gene ontology analysis
missMethyl
9.9 years ago philipp24 ▴ 30
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1.6k
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Pathway analysis of differentially methylated CpGs
limma missmethyl
9.9 years ago philipp24 ▴ 30
27 results • Page 1 of 1
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Comment: Error message that there is no package called Biobase by DamionLedner99 • 0
thanks for sharing!!! https://cran.r-project.org/
Comment: msmsTests, inconsistent sign between lFC.Av and LogFC by Ben • 0
Continued here due to posting difficulties: Extract from the results table: ``` Inhibitor Vehicle lFC.Av LogFC ... F1 0.0 27…
Answer: DESeq2 for 16S rRNA Analysis by James W. MacDonald 68k
The Wald test is only meant for comparison of two groups at a time, so it depends on what you mean by 'analyze across multiple groups at a …
Comment: MetaDE.pvalue: Error in xj[i]: invalid subscript type 'list' by varying.mastodon.isyn • 0
Oh, that error! I remember wrestling with that one for hours when I was first learning Python. Turns out I was trying to use a list itself …
Comment: Confirm that OpenStats will not be archived (pryr dependency) by Marina • 0
Thank you!
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