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qualitycontrol
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reset
0
votes
0
replies
1.4k
views
getsex function error.
QualityControl
methylationArrayAnalysis
3.9 years ago
zusman
• 0
0
votes
1
reply
1.6k
views
Error when running qAlign from QuasR package for sequence alignment & QC.
QualityControl
Alignment
QuasR
updated 4.9 years ago by
Michael Stadler
▴ 350 • written 4.9 years ago by
h.kozlowski
• 0
0
votes
0
replies
939
views
AffyExpress choose relative path folder
folder
quality
QualityControl
AffyExpress
5.0 years ago
bastien_chassagnol
• 0
0
votes
2
replies
2.0k
views
Quality control for Affymetrix GeneChip Mouse Gene 2.0 ST Array
qc
qualitycontrol
arrayqualitymetrics
mouse gene st 2.0
affymetrix
updated 8.4 years ago by
James W. MacDonald
68k • written 8.4 years ago by
n.lu
• 0
3
votes
2
replies
1.3k
views
Q score filter to each base in QualityScaledDNAStringSet
qualitycontrol
updated 8.8 years ago by
Mike Smith
★ 6.6k • written 8.8 years ago by
XIA.PAN
▴ 20
0
votes
0
replies
1.4k
views
Shinymethyl 850K Array quality control signal cutoffs
shinymethyl
minfi
epic microarray
methylationepic
qualitycontrol
8.9 years ago
chelsey.ju
• 0
2
votes
0
replies
1.5k
views
Quality Assessment of one color Agilent arrays?
limma
one colour
agilent microarrays
qualitycontrol
arrayqualitymetrics
9.2 years ago
Bouzid.a
▴ 20
3
votes
14
replies
5.0k
views
GWAS analysis with Illumina HumanOmni5-4 BeadChip - recommended software and workflow
GWASTools
qualitycontrol
HumanOmni5-4BeadChip
GenomeStudio
illumina
updated 9.6 years ago by
Stephanie M. Gogarten
▴ 890 • written 9.6 years ago by
Lna
• 0
2
votes
2
replies
1.9k
views
Manually compute NUSE score
NUSE
qualitycontrol
microarray
updated 10.0 years ago by
Diego Diez
▴ 760 • written 10.0 years ago by
jacorvar
▴ 40
4
votes
2
replies
3.2k
views
Quality control on RNA-Seq (level 3) data from TCGA
rna-seq
GC-Content
qualitycontrol
updated 10.1 years ago by
Matthew McCormack
▴ 180 • written 10.1 years ago by
NS
▴ 60
1
vote
2
replies
2.1k
views
array quality control, affy probes, contracts setting in limma, result interpretation and weights
limma
affy
probe
qualitycontrol
design and contrast matrix
updated 11.0 years ago by
Gordon Smyth
53k • written 11.0 years ago by
alakatos
▴ 130
0
votes
1
reply
1.6k
views
read.maimages problem under sun ?
Microarray
OneChannel
TwoChannel
DifferentialExpression
Preprocessing
QualityControl
affy
18.6 years ago
Amin Moghaddasi
▴ 130
12 results • Page
1 of 1
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Comment: nice 3D displays for PCA analysis
by
adam80haynes
• 0
That's a fascinating application of 3D printing in a scientific context. Using this technology to create custom lab equipment, models of mo…
Comment: Bioinformatician at the Lausanne University Hospital
by
TikTsokaasocissalpc
• 0
The Random Word Generator in Italian is a useful tool for generating ideas and exploring new approaches, much like the innovative research …
Comment: DECIPHER DesignProbes unable to design FISH-probes
by
TikTsokaasocissalpc
• 0
If you want to share your research progress and microbiome discoveries with colleagues or friends, [snaptroid android][1] download free mak…
Answer: Limma-voom sample weights and impact on DEG numbers
by
Gordon Smyth
53k
I recommend that you always use voomLmFit() instead of the earlier voom() or voomWithQualityWeights() functions. Personally, I would use sa…
Answer: wgcna module preseravtion taking too long?
by
ATpoint
★ 5.0k
WGCNA is not a Bioconductor package, you won't get an answer here. Consider biostars.org or the r/bioinformatics reddit. Note that 10 sampl…
Votes
Answer: DESeq2 class error: superclass "ExpData" not defined in the environment of the o
Limma-voom sample weights and impact on DEG numbers
C: DESeq2 Following RSEM
Upcoming Ensembl API and data access changes - new blog post available
Comment: Highly similar RNA-seq samples in PCA - pooling or technical duplication?
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Dario Strbenac
★ 1.6k
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