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qualitycontrol
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0
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1.2k
views
getsex function error.
QualityControl
methylationArrayAnalysis
2.8 years ago
zusman
• 0
0
votes
1
reply
1.2k
views
Error when running qAlign from QuasR package for sequence alignment & QC.
QualityControl
Alignment
QuasR
updated 3.8 years ago by
Michael Stadler
▴ 350 • written 3.8 years ago by
h.kozlowski
• 0
0
votes
0
replies
721
views
AffyExpress choose relative path folder
folder
quality
QualityControl
AffyExpress
3.9 years ago
bastien_chassagnol
• 0
0
votes
2
replies
1.6k
views
Quality control for Affymetrix GeneChip Mouse Gene 2.0 ST Array
qc
qualitycontrol
arrayqualitymetrics
mouse gene st 2.0
affymetrix
updated 7.3 years ago by
James W. MacDonald
67k • written 7.3 years ago by
n.lu
• 0
3
votes
2
replies
1.1k
views
Q score filter to each base in QualityScaledDNAStringSet
qualitycontrol
updated 7.7 years ago by
Mike Smith
★ 6.6k • written 7.7 years ago by
XIA.PAN
▴ 20
0
votes
0
replies
1.1k
views
Shinymethyl 850K Array quality control signal cutoffs
shinymethyl
minfi
epic microarray
methylationepic
qualitycontrol
7.8 years ago
chelsey.ju
• 0
2
votes
0
replies
1.2k
views
Quality Assessment of one color Agilent arrays?
limma
one colour
agilent microarrays
qualitycontrol
arrayqualitymetrics
8.1 years ago
Bouzid.a
▴ 20
1
vote
14
replies
4.1k
views
GWAS analysis with Illumina HumanOmni5-4 BeadChip - recommended software and workflow
GWASTools
qualitycontrol
HumanOmni5-4BeadChip
GenomeStudio
illumina
updated 8.5 years ago by
Stephanie M. Gogarten
▴ 870 • written 8.5 years ago by
Lna
• 0
2
votes
2
replies
1.6k
views
Manually compute NUSE score
NUSE
qualitycontrol
microarray
updated 8.9 years ago by
Diego Diez
▴ 760 • written 8.9 years ago by
jacorvar
▴ 40
4
votes
2
replies
2.6k
views
Quality control on RNA-Seq (level 3) data from TCGA
rna-seq
GC-Content
qualitycontrol
updated 9.0 years ago by
Matthew McCormack
▴ 180 • written 9.0 years ago by
NS
▴ 60
1
vote
2
replies
1.9k
views
array quality control, affy probes, contracts setting in limma, result interpretation and weights
limma
affy
probe
qualitycontrol
design and contrast matrix
updated 9.9 years ago by
Gordon Smyth
51k • written 9.9 years ago by
alakatos
▴ 130
0
votes
1
reply
1.4k
views
read.maimages problem under sun ?
Microarray
OneChannel
TwoChannel
DifferentialExpression
Preprocessing
QualityControl
affy
17.5 years ago
Amin Moghaddasi
▴ 130
12 results • Page
1 of 1
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Comment: Differene between the Wald and LRT test for time-series gene expression data
by
Denise
• 0
This makes a lot of sense, thank you very much!
Comment: Downloading Metagenomic Data with Higher Taxonomic Units
by
elozanoe
• 0
Hi! I'm facing the same problem. Is there any easy way to output relative abundances of higher taxonomic units (up to kingdom), similar to…
Answer: Unlocking Potential: NURS FPX Strategies and Insights
by
efsane_kral2000
• 0
https://diendannhansu.com/threads/hayal-sohbet-odalari.667004/ https://forum.realdigital.org/u/serkan https://animefagos.com/miembros/ser…
Comment: Unlocking Potential: NURS FPX Strategies and Insights
by
efsane_kral2000
• 0
https://www.hayalsohbet.net https://www.yerlichat.com https://www.yerlichat.net https://www.mavisim.net https://www.hayalchat.com http…
Comment: Is it recommended to analyze different tissues together when using edgeR
by
Gordon Smyth
51k
Just plot the samples with plotMDS(). Alternatively you would use `voomLmFit()` with `sample.weights=TRUE` or `var.group=tissue`. In princ…
Votes
A: correcting the batch effects in Limma and SVA
A: Using of limma moderated t-test with "corrected" expression matrix resulting fr
A: Using of limma moderated t-test with "corrected" expression matrix resulting fr
Answer: Differene between the Wald and LRT test for time-series gene expression data
Answer: Using voom-transformed counts for unsupervised analyses (PCA, Random Forest, Ela
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Gordon Smyth
51k
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James W. MacDonald
67k
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