Bioconductor Qualitycontrol

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QualityControl methylationArrayAnalysis

3.9 years ago zusman • 0

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1.6k

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QualityControl Alignment QuasR

updated 4.9 years ago by Michael Stadler ▴ 350 • written 4.9 years ago by h.kozlowski • 0

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939

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folder quality QualityControl AffyExpress

5.0 years ago bastien_chassagnol • 0

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qc qualitycontrol arrayqualitymetrics mouse gene st 2.0 affymetrix

updated 8.3 years ago by James W. MacDonald 68k • written 8.3 years ago by n.lu • 0

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qualitycontrol

updated 8.8 years ago by Mike Smith ★ 6.6k • written 8.8 years ago by XIA.PAN ▴ 20

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shinymethyl minfi epic microarray methylationepic qualitycontrol

8.8 years ago chelsey.ju • 0

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limma one colour agilent microarrays qualitycontrol arrayqualitymetrics

9.2 years ago Bouzid.a ▴ 20

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GWASTools qualitycontrol HumanOmni5-4BeadChip GenomeStudio illumina

updated 9.6 years ago by Stephanie M. Gogarten ▴ 890 • written 9.6 years ago by Lna • 0

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1.9k

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NUSE qualitycontrol microarray

updated 10.0 years ago by Diego Diez ▴ 760 • written 10.0 years ago by jacorvar ▴ 40

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rna-seq GC-Content qualitycontrol

updated 10.1 years ago by Matthew McCormack ▴ 180 • written 10.1 years ago by NS ▴ 60

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limma affy probe qualitycontrol design and contrast matrix

updated 11.0 years ago by Gordon Smyth 53k • written 11.0 years ago by alakatos ▴ 130

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Microarray OneChannel TwoChannel DifferentialExpression Preprocessing QualityControl affy

18.6 years ago Amin Moghaddasi ▴ 130

12 results • Page 1 of 1

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Answer: wgcna module preseravtion taking too long? by ATpoint ★ 5.0k

WGCNA is not a Bioconductor package, you won't get an answer here. Consider biostars.org or the r/bioinformatics reddit. Note that 10 sampl…

Answer: Question about RE-agnostic mode for intact Hi-C and Micro-C normalization(HiCDCP by victor04052024 • 0

You write quite well, and the content is very interesting. I'll provide you a link to my page [granny 2](https://granny2.io).

Answer: DESeq2 - how many surrogate variables from svaseq, use of lfcshrink by victor04052024 • 0

The information is interesting, and your writing is excellent. I will provide you a link to my website [Baseball bros](https://baseball-gam…

Comment: segfault in edgeR glmQLFit by Gordon Smyth 53k

We have committed a bug fix now to edgeR on both the release and developmental Bioconductor repositories.

Answer: Ensembl site unresponsive via biomaRt by horaortiz8 • 0

I appreciate the link. I'll get in touch with them directly; I wish they had a status page of some kind. https://www.ensembl.org/Help/Cont…

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Limma-voom sample weights and impact on DEG numbers

C: DESeq2 Following RSEM

Upcoming Ensembl API and data access changes - new blog post available

Comment: Highly similar RNA-seq samples in PCA - pooling or technical duplication?

Answer: Large logFC but somewhat high FDR

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