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qualitycontrol
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0
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1.4k
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getsex function error.
QualityControl
methylationArrayAnalysis
3.7 years ago
zusman
• 0
0
votes
1
reply
1.5k
views
Error when running qAlign from QuasR package for sequence alignment & QC.
QualityControl
Alignment
QuasR
updated 4.8 years ago by
Michael Stadler
▴ 350 • written 4.8 years ago by
h.kozlowski
• 0
0
votes
0
replies
898
views
AffyExpress choose relative path folder
folder
quality
QualityControl
AffyExpress
4.9 years ago
bastien_chassagnol
• 0
0
votes
2
replies
2.0k
views
Quality control for Affymetrix GeneChip Mouse Gene 2.0 ST Array
qc
qualitycontrol
arrayqualitymetrics
mouse gene st 2.0
affymetrix
updated 8.2 years ago by
James W. MacDonald
68k • written 8.2 years ago by
n.lu
• 0
3
votes
2
replies
1.2k
views
Q score filter to each base in QualityScaledDNAStringSet
qualitycontrol
updated 8.7 years ago by
Mike Smith
★ 6.6k • written 8.7 years ago by
XIA.PAN
▴ 20
0
votes
0
replies
1.4k
views
Shinymethyl 850K Array quality control signal cutoffs
shinymethyl
minfi
epic microarray
methylationepic
qualitycontrol
8.7 years ago
chelsey.ju
• 0
2
votes
0
replies
1.5k
views
Quality Assessment of one color Agilent arrays?
limma
one colour
agilent microarrays
qualitycontrol
arrayqualitymetrics
9.0 years ago
Bouzid.a
▴ 20
3
votes
14
replies
4.9k
views
GWAS analysis with Illumina HumanOmni5-4 BeadChip - recommended software and workflow
GWASTools
qualitycontrol
HumanOmni5-4BeadChip
GenomeStudio
illumina
updated 9.5 years ago by
Stephanie M. Gogarten
▴ 890 • written 9.5 years ago by
Lna
• 0
2
votes
2
replies
1.9k
views
Manually compute NUSE score
NUSE
qualitycontrol
microarray
updated 9.8 years ago by
Diego Diez
▴ 760 • written 9.8 years ago by
jacorvar
▴ 40
4
votes
2
replies
3.1k
views
Quality control on RNA-Seq (level 3) data from TCGA
rna-seq
GC-Content
qualitycontrol
updated 10.0 years ago by
Matthew McCormack
▴ 180 • written 10.0 years ago by
NS
▴ 60
1
vote
2
replies
2.1k
views
array quality control, affy probes, contracts setting in limma, result interpretation and weights
limma
affy
probe
qualitycontrol
design and contrast matrix
updated 10.8 years ago by
Gordon Smyth
53k • written 10.8 years ago by
alakatos
▴ 130
0
votes
1
reply
1.6k
views
read.maimages problem under sun ?
Microarray
OneChannel
TwoChannel
DifferentialExpression
Preprocessing
QualityControl
affy
18.5 years ago
Amin Moghaddasi
▴ 130
12 results • Page
1 of 1
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Comment: Save the Date for EuroBioC2026 in Turku!
by
jamesbennettki
• 0
That sounds amazing I have always wanted to visit Finland and meet others in the Bioconductor community Events like EuroBioC2026 inspire me…
Answer: "Watched Tags" are being erased rather than updated
by
shepherl
4.2k
This should now be resolved
Answer: Question about collapsing ASVs by genus level during DESeq2 analysis
by
Michael Love
43k
I'll just note that microbiome stats folks tend to use other tools than DESeq2. > several ASVs belong to the same genus but are not iden…
Answer: Integration: Paired-end vs healthy single-end from a different source
by
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68k
If by reprocess you mean generate libraries and re-sequence, then that's something you could do. Otherwise the biological and technical dif…
Comment: "Watched Tags" are being erased rather than updated
by
shepherl
4.2k
I can reproduce this and have opened an issue on the code base https://github.com/Bioconductor/support.bioconductor.org/issues/112
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Bioconductor 3.22 Released!
Bioconductor 3.22 Released!
Comment: "Watched Tags" are being erased rather than updated
Comment: deseq2 filter the low counts
Answer: DESeq2 interactions
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