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Comment: Feature Counts - potential bug with outfile.jcounts
by
chris2.a.white
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0
Hi @gordonsmyth and @weishi,
Firstly, thank you for offering your time to develop the junction quantification module further. This is gre…
Comment: how should I apply "cpg.annotate" to TCGA methylation data in hg38 for HM450K?
by
xiaofeiwang198266
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Hi Tim,
Thanks for your reply!
Yes, my data is 450K, and it is TCGA methylation data downloaded by TCGAbiolinks. The problem is that I can …
Answer: Error in get_anno_data(ontology) : ontology not supported yet...
by
Guido Hooiveld
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Did you check the help page for the function `enrichDO`? Type `?enrichDO`.
I am asking, because there it is stated that the argument `ont`…
Comment: Build error on kunpeng2 Linux aarch64
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Hi,
There was a problem with `icu` and because of that the (r)curl library was not installed. The system/OS curl library is one version ol…
Answer: Standardization of rlog transformed counts before PCA
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I guess you mean scaling in terms of Z-scoring? There are plenty of posts towards scaling in PCA both here on Bioconductor and in other com…
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