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365
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PTM analysis in LIMPA
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Highly similar RNA-seq samples in PCA - pooling or technical duplication?
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Question about DESeq2 Design for Paired Treatment Study
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449
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PFAM formats changed - is it still possible to use this with ISA?
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DECIPHER DesignProbes unable to design FISH-probes
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4
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Large logFC but somewhat high FDR
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3 months ago • updated 12 weeks ago JKim • 0
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upstream git branches of bioc-release
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limpa - drivers for unusually high standard error?
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How can I correctly use phyloseq with Docker?
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Boolean Gate Combination for Any 2 Positive Events in flowWorkspace
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Install old version of DESeq2
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Guidance Requested on GCN Network Analysis and Module Enrichment in R
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485
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Empty boxes in treemap plot rrvgo package
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381
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CRISPRSeek Question: changing weight and gRNA.size causes error
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sigDF object in sesame
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487
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Create consensusMatrix for codon bases
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543
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11
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Using DESeq2 on single cell RNA Seq data of same cell type but different conditions that were pseudo bulked
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385
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445
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DESeq2 on non-RNASeq counts data
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0
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632
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After running samtools, the featureCounts command crashed.
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744
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Problem with the TMB plot
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0
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369
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mzR-Rcpp compiler version issue
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updated 3 months ago by 1.6k • written 6 months ago by • 0
2
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0
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628
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Must I do pseudobulk analysis on Cell Surface Protein Labeling data of Single Cell RNA Sequencing
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updated 3 months ago by ★ 4.0k • written 3 months ago by • 0
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0
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407
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Corrupted SQLite while trying to install PANTHER.db?
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updated 3 months ago by ★ 4.0k • written 6 months ago by • 0
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1
reply
525
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org.Ss.eg.db MAMDC4 maps to incorrect UNIPROT key
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1
reply
407
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Length of 'dimnames' [1] not equal to array extent
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updated 3 months ago by ★ 4.0k • written 6 months ago by • 0
0
votes
1
reply
459
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Extract snp information from genomic regions with biomaRt -> "oaries_snp"
biomaRt
updated 3 months ago by ★ 4.0k • written 5 months ago by • 0
0
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2
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414
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3-factor DESeq2 trime-series analysis
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46,779 results • Page 3 of 936
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Comment: Can sample-level weights be used when analysing GSVA scores in limma? by A.Barden ▴ 20
Thanks both for this useful information.
Comment: Reproducibility of code in various Bioconductor versions by Gordon Smyth 53k
SNPlocs.Hsapiens.dbSNP155.GRCh38 is available for download from the same location as always. It has not changed since Bioc 3.20: Presumabl…
Comment: Changing multiple display parameters of a specific exon in GeneRegionTrack by a2a2hd42aa • 0
Similarly, for structural complexity in the [He777 Game][1] APK, having precise control over every detail is what makes a high-performance …
Answer: Issue loading and downloading Bioconductor 3.22 packages after update by strawberry3 • 0
Hi, thank you all for the advice. Using James's advice, I managed to install SNPlocs.Hsapiens.dbSNP155.GRCh38, but it took almost half an …
Answer: Issue loading and downloading Bioconductor 3.22 packages after update by James W. MacDonald 68k
As Robert and ATpoint have mentioned, you need to allow more time to download a large file like this. ``` > options(timeout = 5e5) > l…
Votes
Answer: Can sample-level weights be used when analysing GSVA scores in limma?
Answer: Can sample-level weights be used when analysing GSVA scores in limma?
Comment: Can sample-level weights be used when analysing GSVA scores in limma?
Answer: Issue loading and downloading Bioconductor 3.22 packages after update
Answer: Issue loading and downloading Bioconductor 3.22 packages after update
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