Log In
Sign Up
about
faq
Ask a question
Latest
News
Jobs
Tutorials
Tags
Users
New Post
Latest
News
Jobs
Tutorials
Tags
Users
Log In
Sign Up
About
Limit
all time
today
this week
this month
this year
Unanswered
All posts
Sort
Update
Answers
Bookmarks
Creation
Replies
Rank
Views
Votes
0
votes
0
replies
85
views
News:
GSEA in R/Bioconductor course
GSEABenchmarkeR
pairedGSEA
GeneSetEnrichment
15 days ago
info
▴ 10
0
votes
0
replies
105
views
News:
EuroBioC2025: Abstract Submissions Open!
EuroBioC2025
Community
Conference
Bioconductor
23 days ago
Maria Doyle
▴ 100
0
votes
3
replies
977
views
News:
EuroBioC2023 abstract submission is open!
presentation
EuroBioC2023
Conference
community
Bioconductor
updated 9 days ago by
ht
• 0 • written 2.0 years ago by
Maria Doyle
▴ 100
0
votes
1
reply
198
views
News:
Gene Set Enrichment Analysis in Bioconductor course
GSEABase
GeneSetEnrichment
goseq
24 days ago • updated 15 days ago
info
▴ 10
0
votes
0
replies
10
views
Spam:
Maxwinbet77 | Popularitas Slot Deposit Ovo 5000 Naik Meningkat & Menguntungkan
JobPosting
customCMPdb
TransOmicsData
4 weeks ago
Abu
0
0
votes
0
replies
12
views
Spam:
SLOT DANA 5K >> Situs Slot Deposit Dana 5000 Maxwinbet77 Tanpa Potongan Dinamis & Elegan
GOTHiC
BubbleTree
PANR
4 weeks ago
Abu
0
0
votes
0
replies
70
views
News:
GBCC2025 Abstract Submissions & Registration Now Open!
Community
Conference
GBCC2025
Bioconductor
4 weeks ago
Maria Doyle
▴ 100
0
votes
0
replies
85
views
News:
Mass Spectrometry and Proteomics with R/Bioconductor course
cadd.v1.6.hg38
6 weeks ago
info
▴ 10
0
votes
0
replies
82
views
News:
Announcing the GBCC2025 Logo Design Winner!
Community
Conference
GBCC2025
Bioconductor
6 weeks ago
Maria Doyle
▴ 100
1
vote
0
replies
206
views
News:
Bioconductor Course, Kenya 2025: Applications Open!
Events
Community
Training
Africa
Bioconductor
6 weeks ago
Maria Doyle
▴ 100
0
votes
0
replies
152
views
News:
Online course: Gene set enrichment analysis in R/Bioconductor
GSEABenchmarkeR
8 weeks ago
info
▴ 10
0
votes
3
replies
1.3k
views
News:
EuroBioC2023 abstract submission closing soon!
presentation
EuroBioc2023
Conference
community
Bioconductor
written 23 months ago by
Maria Doyle
▴ 100
0
votes
5
replies
1.3k
views
News:
EuroBioC2024 abstract submission is open!
Conference
Bioconductor
EuroBioC2024
updated 11 weeks ago by
Alan Downey
• 0 • written 13 months ago by
Maria Doyle
▴ 100
0
votes
1
reply
9
views
Spam:
Small Business Directory Emerald Coast
BUScorrect
offtopic
updated 3 months ago by
shepherl
4.1k • written 3 months ago by
2zrcj3448p
0
1
vote
0
replies
717
views
News:
Bioconductor 3.20 is Released!
Bioconductor
Release
Software
4 months ago
shepherl
4.1k
0
votes
0
replies
202
views
News:
RNAseq data analysis with R/Bioconductor (4-15 November)
DESeq2
GenomicRanges
4 months ago
info
▴ 10
0
votes
0
replies
268
views
News:
Announcing the GBCC2025 Logo Design Contest!
Conference
Community
Galaxy
GBCC2025
Bioconductor
4 months ago
Maria Doyle
▴ 100
0
votes
0
replies
274
views
News:
List of Deprecated Packages for Bioc3.20
Devel
Bioconductor
Release
4 months ago
shepherl
4.1k
0
votes
11
replies
1.8k
views
News:
List of Deprecated Packages for Bioc3.19
Release
Devel
ExperimentData
Software
12 months ago • updated 4 months ago
shepherl
4.1k
0
votes
0
replies
401
views
News:
Ensembl 113 has been released
ensembl
ensembldb
mart
biomaRt
4 months ago
Ensembl_Jorge
• 0
3
votes
3
replies
1.5k
views
News:
Bioconductor 3.20 Release Schedule
software
release
Release
updated 4 months ago by
Gordon Smyth
52k • written 6 months ago by
shepherl
4.1k
0
votes
0
replies
242
views
News:
Single-cell RNA-seq analysis with R/Bioconductor (online course)
SingleCellExperiment
SingleCell
5 months ago
info
▴ 10
0
votes
0
replies
309
views
News:
RNAseq data analysis with Bioconductor (online course)
DESeq2
SummarizedExperiment
5 months ago • updated 4 months ago
info
▴ 10
0
votes
1
reply
564
views
News:
Subject: Last 2 Seats Available for Metabolomics with R/Bioconductor Course (October 7-10)
Metabolomics
xcms
updated 5 months ago by
Harry
• 0 • written 5 months ago by
info
▴ 10
0
votes
0
replies
17
views
Spam:
Online gaming
EWCE
games
5 months ago
Lisandro Hermoso
0
0
votes
0
replies
282
views
News:
Opportunity for Carpentries Instructors to Teach Bioconductor in Africa
Carpentries
Community
Teaching
Bioconductor
5 months ago
Maria Doyle
▴ 100
0
votes
0
replies
361
views
News:
Metabolomics with R/Bioconductor Online Course
metabomxtr
MetaboCoreUtils
metabolomicsWorkbenchR
Metabolomics
6 months ago
info
▴ 10
2
votes
0
replies
627
views
News:
Save the Date for EuroBioC2025 in Barcelona!
EuroBioC2025
Conference
Bioconductor
Community
6 months ago
Maria Doyle
▴ 100
0
votes
1
reply
958
views
News:
Announcing GBCC 2025: The first-ever joint conference between Bioconductor and Galaxy!
Conference
Bioconductor
Community
written 6 months ago by
Maria Doyle
▴ 100
0
votes
1
reply
477
views
News:
BioCAsia 2024 Registration Now Open!
BioCAsia2024
Conference
Community
Bioconductor
6 months ago
Maria Doyle
▴ 100
0
votes
0
replies
389
views
News:
EuroBioC Updates: Important Deadlines
Conference
EuroBioC2024
Bioconductor
Community
EuroBioC
7 months ago
Maria Doyle
▴ 100
0
votes
0
replies
322
views
News:
Annual Nominations Open for CAB and TAB! Deadline Aug 31
TAB
CAB
Bioconductor
7 months ago
shepherl
4.1k
1
vote
0
replies
609
views
News:
Bioconductor Package Download Rate Limitation (HTTP 429)
downloads
http429
http
Bioconductor
7 months ago
shepherl
4.1k
0
votes
0
replies
371
views
News:
EuroBioC2024 Carpentries workshops Sep 2-3
Community
Workshop
Bioconductor
EuroBioC2024
8 months ago
Maria Doyle
▴ 100
0
votes
0
replies
363
views
News:
BioC2024 in-person registration closes soon (July 10)
BioC2024
Conference
Bioconductor
Community
8 months ago
Maria Doyle
▴ 100
0
votes
0
replies
375
views
News:
AnnotationHub and ExperimentHub Access Downtime
AnnotationHub
ExperimentHub
9 months ago
shepherl
4.1k
0
votes
1
reply
527
views
News:
Stop mirror service
metaMSdata
updated 9 months ago by
shepherl
4.1k • written 9 months ago by
khonda
• 0
1
vote
1
reply
1.1k
views
News:
Win 1 of 50 free virtual registrations to BioC Asia 2022 (Dec 1-2, 2022)
Asia
BioCAsia
Conferences
Events
BioC
written 2.4 years ago by
Peter Hickey
▴ 750
0
votes
0
replies
23
views
Spam:
Drug Discovery
flowBeads
9 months ago
Zoe
0
0
votes
0
replies
363
views
News:
Legacy Bioconductor Installation
Installation
Bioconductor
9 months ago
shepherl
4.1k
0
votes
0
replies
418
views
News:
Online course: Network Analysis in Systems Biology with R/Bioconductor
SystemsBiology
Bioconductor
Network
9 months ago
info
▴ 10
0
votes
1
reply
393
views
News:
Bioconductor Build System
Builds
Bioconductor
written 9 months ago by
shepherl
4.1k
0
votes
0
replies
462
views
News:
BioC2024 Bioconductor Carpentries RNA-Seq Workshop July 22-23
BioC2024
Conference
Bioconductor
Community
9 months ago
Maria Doyle
▴ 100
1
vote
0
replies
707
views
News:
Last Call: Nominations for Bioconductor Awards 2024! Deadline May 15
Recognition
Awards
Bioconductor
Bioc204
11 months ago • updated 10 months ago
shepherl
4.1k
1
vote
0
replies
609
views
News:
Ensembl 112 has been released.
ensembldb
biomaRt
ensemblrelease
10 months ago
Aleena
▴ 30
4
votes
0
replies
1.0k
views
News:
Bioconductor 3.19 is Released!
Release
Bioconductor
Packages
Software
10 months ago
shepherl
4.1k
0
votes
0
replies
413
views
News:
BioC2024 deadlines approaching
BioC2024
Bioconductor
Community
10 months ago
Maria Doyle
▴ 100
0
votes
0
replies
406
views
News:
Interested in the analysis of Spatial Omics data?
tidySpatialExperiment
SpatialExperiment
MoleculeExperiment
10 months ago
info
▴ 10
0
votes
5
replies
1.8k
views
News:
European Bioconductor Conference 2023 planning
Europe
Conference
EuroBioC
Events
News
updated 10 days ago by
Andrew
• 0 • written 2.4 years ago by
Maria Doyle
▴ 100
0
votes
1
reply
485
views
News:
Services
flowBeads
written 11 months ago by
creativepeptides2018
• 0
64 results • Page
1 of 2
Recent ...
Replies
Answer: Use of org.Rn.eg.db with GRCr8 reference genome
by
James W. MacDonald
68k
You've got it backwards. It should be ``` adult_res_df$symbol <- mapIds(org.Rn.eg.db, keys = rownames(adult_res_df), column = "ENSEMBL"…
Comment: DESeq2 swap ensembl gene id rownames with gene symbol column
by
Erika
• 0
Alternatively, you could have added a column with the common gene names. Assuming your dataframe `df` was created using `DESeq()`, somethin…
Answer: Clarification on GOALL / GO2ALLORFs mapping
by
James W. MacDonald
68k
It appears that 'negative regulation of glycogen biosynthesis' has an 'is a' relationship with 'glycogen biosynthetic process' https://www.…
Comment: Can't post a question?
by
DavideSant
• 0
Thank you, this was super useful!
Comment: Error in retrieving clinical data
by
silickas
• 0
Thank you for the reply. I will try to do that next time. This time instead, I used the GenomicDataCommons package to download clinical dat…
Votes
Comment: Can't post a question?
Answer: Limma - Complex 2-way multi-level contrast with paired samples
Answer: [ChIP-seq] DESeq2 on counts matrix from union set of called peaks
Help with creation of an OrgDB package and conduction of a bioinformatical analysis of gene expression
Answer: Loading Ensembl 98 EnsDb from Annotation Hub fails with database disk image malf
Awards
• All
Popular Question
to
xiaofeiwang198266
• 0
Scholar
to
shepherl
4.1k
Popular Question
to
James W. MacDonald
68k
Popular Question
to
Gordon Smyth
52k
Popular Question
to
AB
▴ 110
Locations
• All
The city by the bay,
30 minutes ago
WEHI, Melbourne, Australia,
2 hours ago
UPF, Barcelona, Spain,
2 hours ago
united kingdom,
7 hours ago
United Kingdom,
8 hours ago
Traffic: 780 users visited in the last hour
Content
Search
Users
Tags
Badges
Help
About
FAQ
Access
RSS
API
Stats
Use of this site constitutes acceptance of our
User Agreement and Privacy Policy
.
Powered by the
version 2.3.6