Bioconductor Bioc-devel

Showing : Bioc-devel • reset

vote

replies

1.6k

views

DropletUtils Bioc-devel

6.0 years ago Matthew Thornton ▴ 380

vote

replies

1.5k

views

developers bioc-devel

6.4 years ago Casper van Mourik • 0

votes

replies

1.6k

views

developers bioc-devel package development circular dependencies

updated 6.5 years ago by shepherl 4.1k • written 6.5 years ago by Tim Triche ★ 4.2k

votes

2.5k

views

bioconductor developers bioc-devel News

7.0 years ago Alejandro Reyes ★ 1.9k

votes

replies

3.1k

views

bioccheck roxygen2 warning bioc-devel package development

updated 7.4 years ago by Lluís Revilla Sancho ▴ 760 • written 7.4 years ago by Paul Brennan ▴ 10

votes

replies

2.5k

views

subversion bioc-devel package development usedevel Tutorial

7.6 years ago Bohdan Khomtchouk ▴ 10

votes

replies

1.4k

views

developers bioc-devel

updated 8.0 years ago by Martin Morgan 25k • written 8.0 years ago by mlbendall • 0

votes

replies

4.2k

views

rtracklayer bioc-devel ssl openssl

updated 8.8 years ago by Michael Lawrence ★ 11k • written 8.8 years ago by Peter Hickey ▴ 750

vote

replies

2.0k

views

software bioc-devel developers R

updated 9.4 years ago by Dan Tenenbaum ★ 8.2k • written 9.4 years ago by MarcinKosiński • 0

votes

replies

2.6k

views

docker bioc-devel

updated 9.8 years ago by Dan Tenenbaum ★ 8.2k • written 9.8 years ago by Nathan Sheffield ▴ 10

votes

replies

1.9k

views

package bioconductor bioc-devel developers

9.9 years ago flying-sheep ▴ 10

votes

replies

2.4k

views

readvcf plink file conversion bed bioc-devel

10.0 years ago mjsduncan • 0

votes

2.2k

views

installation bioc-devel

updated 10.5 years ago by Martin Morgan 25k • written 10.5 years ago by Tiphaine Martin ▴ 40

vote

1.9k

views

software error bioc-devel

updated 10.5 years ago by Martin Morgan 25k • written 10.5 years ago by Tiphaine Martin ▴ 40

14 results • Page 1 of 1

Recent ...

Replies

Answer: Help with the code for "BiocNeighbors::generic_find_knn() function used by scran by Aaron Lun ★ 28k

It's calling C++ code, see the relevant function definitions on [GitHub](https://github.com/knncolle/BiocNeighbors/blob/master/src/generics…

Answer: DESeq2 by ATpoint ★ 4.8k

Time courses are often inevitable batches but you should have done the library prep at the same day, just extract RNA per day. If not then …

Comment: Package developing and interoperation with Bioconductor by slizchap • 0

Thank you so much for your answer. This was very useful, I will optimize my functions so they can handle SE objects.

Comment: Package developing and interoperation with Bioconductor by slizchap • 0

Thank you so much for your answer, very useful!

Comment: Error in H5Dclose(h5dataset) when trying to read in kallisto h5 files by Mike Smith ★ 6.6k

Tricky to try and debug this without some example files to work with. Can you provide the output of `traceback()` called immediately after…

Votes

Is it possible to speed up VariantAnnotation's rowRanges function when converting to a dataframe?

Answer: Is it possible to speed up VariantAnnotation's rowRanges function when convertin

Comment: ComBat with repeated measures

Answer: Package developing and interoperation with Bioconductor

Answer: CpGs with genomic positions greater than the chromosome size in EPICv2?

Awards • All