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70
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38
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10
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15k
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22
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120
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610
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14
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370
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690
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60
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130
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220
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Guest User
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Recent ...
Replies
Comment: Cannot extract size factor from DESeq2 analysis
by
s.malik
•
0
Dear Mike,
using tximeta and following code, is this fine to extract normalized counts after `sizeFactors(dds)` gives NULL?
`dds <- DESeq…
Comment: Design formula for circadian time-course data for vst() function
by
Vishnu
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0
Thank you so much for your reply.
Comment: Analyzing TnSeq data with DESeq2
by
Tom
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[Doncaster Locksmith][1] delivers trusted, efficient security services tailored to your needs. Analyzing TnSeq data with DESeq2 may uncover…
Answer: Design formula for circadian time-course data for vst() function
by
ATpoint
★
4.8k
This was asked before: https://support.bioconductor.org/p/9148734/#9148812
Take-home message is that influence is minor, as you see your…
Comment: Filtering after DESeq
by
caroline.zanchi
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0
... I did it.
It does filter out quite a bit of genes :
```
keep <- filterByExpr(dds, group="host_treatment_generation",min.count = 10, mi…
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