Bioconductor Filter

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1.2k

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filter deseq2

updated 23 months ago by Michael Love 43k • written 23 months ago by PD • 0

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1.4k

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R filter limma Normalization Microarray

23 months ago Abdul ▴ 20

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748

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filter gate_quad_tmix gt_gating

3.0 years ago • updated 2.9 years ago Pierre • 0

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955

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flowCore openCyto Summary Result Filter

updated 4.9 years ago by Jake Wagner ▴ 310 • written 5.0 years ago by noviello • 0

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1.8k

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RNA WGCNA filter

5.7 years ago modarzi ▴ 10

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1.1k

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filter deseq2

updated 6.0 years ago by Michael Love 43k • written 6.0 years ago by charles.foster ▴ 180

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1.4k

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rtracklayer gff filter

updated 6.1 years ago by Michael Lawrence ★ 11k • written 6.1 years ago by alslonik • 0

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2.2k

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deseq2 filter genefilter

updated 7.4 years ago by Michael Love 43k • written 7.4 years ago by Björn • 0

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4.3k

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loop filter

written 7.4 years ago by kritikamish99 ▴ 10

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3.8k

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DGElist filter edgeR

updated 7.7 years ago by Gordon Smyth 52k • written 7.7 years ago by alakatos ▴ 130

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1.5k

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limma filter genelist differential gene expression

updated 8.4 years ago by Gordon Smyth 52k • written 8.5 years ago by bi_Scholar • 0

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1.2k

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missing data filter

updated 9.3 years ago by James W. MacDonald 68k • written 9.3 years ago by rgescudero • 0

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1.5k

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flowcore gate subsetting filter

updated 9.5 years ago by Jiang, Mike ★ 1.3k • written 9.5 years ago by peterfoster ▴ 20

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3.0k

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probe filter subset gene symbol affy

10.1 years ago alakatos ▴ 130

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4.0k

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bioconductor mas5 perfectmatch affymetrixchip filter

updated 10.1 years ago by James W. MacDonald 68k • written 10.1 years ago by svlachavas ▴ 840

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3.4k

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deseq filter reads

10.2 years ago ccheung • 0

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1.5k

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variantannotation vcf fixed filter

10.2 years ago Anna N. • 0

17 results • Page 1 of 1

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Comment: Package developing and interoperation with Bioconductor by slizchap • 0

Thank you so much for your answer. This was very useful, I will optimize my functions so they can handle SE objects.

Comment: Package developing and interoperation with Bioconductor by slizchap • 0

Thank you so much for your answer, very useful!

Comment: Error in H5Dclose(h5dataset) when trying to read in kallisto h5 files by Mike Smith ★ 6.6k

Tricky to try and debug this without some example files to work with. Can you provide the output of `traceback()` called immediately after…

Answer: Mismatch between Illumina Mouse Methylation BeadChip annotation and genome brows by James W. MacDonald 68k

The annotation data that is provided for this array is simply a repackaging of data that we get from Illumina, so any apparent inconsistenc…

Answer: Package developing and interoperation with Bioconductor by James W. MacDonald 68k

Ideally you would have S4 methods that dispatch on the incoming data structure, so people could call your main function using a `data.frame…

Votes

Comment: ComBat with repeated measures

Answer: Package developing and interoperation with Bioconductor

Answer: CpGs with genomic positions greater than the chromosome size in EPICv2?

Answer: Explannation for ROAST results

A: How DiffBind run PCA based on peak data?

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