Showing : HtqPCR • reset
1
vote
5
replies
639
views
Manual creation of qPCRset does not work
bug nondetects HTqPCR
updated 7 months ago by • 0 • written 8 months ago by ▴ 230
0
votes
3
replies
416
views
Technical Replicates in HTqPCR
HTqPCR
written 9 months ago by ▴ 230
0
votes
0
replies
646
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How to perform a cluster analysis in RT-qPCR or HT-qPCR results?
cluster qpcr qpcrNorm clusterProfiler HTqPCR
19 months ago Javier • 0
0
votes
0
replies
588
views
Made a pDATA manually for HTqPCR procedure
HTqPCR phenoData esetVis pData
2.6 years ago Marcelo Laia ▴ 450
0
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0
replies
538
views
Error when reading qPCR data in SDS format
HTqPCR
3.2 years ago Nghia • 0
1
vote
1
reply
1.3k
views
HTQPCR - create qPCR set from a matrix of CT values
HTqPCR
updated 3.4 years ago by 51k • written 8.5 years ago by ▴ 40
3
votes
4
replies
3.2k
views
Using limma for the analysis of qPCR data
NormqPCR EasyqpcR qPCR HTqPCR limma
updated 2.6 years ago by ▴ 380 • written 3.4 years ago by ▴ 660
0
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0
replies
531
views
Problems creating qPCRset from RT2 array data with HTqPCR package
HTqPCR
3.9 years ago Maximilian Fuchs • 0
0
votes
0
replies
500
views
HTqPCR package, filterCategory function
HTqPCR filterCategory setCategory
updated 4.4 years ago by 66k • written 4.4 years ago by • 0
0
votes
0
replies
753
views
Sample grouping (phenoData) and visualization in R package- HtqPCR
HtqPCR grouping visualization R phenoData
4.8 years ago mohammedtoufiq91 ▴ 10
0
votes
0
replies
636
views
Analyze ct data using HTqPCR
HTqPCR R NormqPCR
5.0 years ago annesha • 0
0
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0
replies
524
views
Error with HTqPCR rbind
HTqPCR
5.0 years ago NAIARA GARCÍA ▴ 10
0
votes
1
reply
877
views
HTqPCR: dealing with technical replicates (filterCategory) and inability to analyze datasets with filtered genes (limmaCtData).
limma htqpcr
updated 3.4 years ago by • 0 • written 5.5 years ago by • 0
0
votes
0
replies
652
views
A problem about changeCtLayout in HTqPCR
htqpcr
5.5 years ago tropicalis • 0
0
votes
3
replies
993
views
Creation of qPCRset in R for HtqPCR
R bioconductor htqpcr qpcrset object
5.7 years ago mohammedtoufiq91 ▴ 10
0
votes
0
replies
752
views
Creating qPCRset object from Bio-Rad CFX file
htqpcr limma
5.7 years ago dbars • 0
0
votes
0
replies
883
views
HTqPCR - unable to create a 'qPCRset' object
htqpcr expressionset
5.9 years ago jirkanov • 0
0
votes
0
replies
804
views
Inter-run calibration in HTqPCR R package
htqpcr R
6.0 years ago dbarscortina • 0
0
votes
0
replies
933
views
Import problem with HTqPCR Fluidigm 96.96
htqpcr bioconductor fluidigm biomark
6.3 years ago reed27 • 0
0
votes
0
replies
839
views
HTqPCR for Fluidigm Results
htqpcr fluidigm
6.3 years ago rhonce • 0
0
votes
0
replies
835
views
HTqPCR trouble with changeCtLayout
htqpcr qPCR
6.3 years ago samantha_jeschonek • 0
2
votes
2
replies
1.1k
views
Reading in delta Ct values using HTqPCR
htqpcr
updated 6.4 years ago by 51k • written 6.4 years ago by ▴ 10
0
votes
0
replies
734
views
Bugs in HTqPCR 1.30.0?
htqpcr
6.6 years ago h.roest • 0
1
vote
2
replies
1.3k
views
No differential expression with limmaCtData possible
limma htqpcr
6.6 years ago h.roest • 0
0
votes
0
replies
763
views
HTqPCR package: problems with the limmaCtData function
htqpcr
6.9 years ago Frederico Moraes Ferreira ▴ 100
0
votes
1
reply
1.0k
views
Problem duplicated samples for ChangeCtLayout in HTqPCR with fluidigm 96*96
htqpcr
7.2 years ago carine.genet • 0
0
votes
0
replies
863
views
re-format data for HtqPCR
HtqPCR reshape
7.3 years ago Stefany Solano • 0
0
votes
1
reply
1.1k
views
HTqPCR cannot read more recent SDS files
htqpcr
updated 7.3 years ago by • 0 • written 7.4 years ago by ▴ 40
0
votes
3
replies
1.3k
views
HTqPCR does not copy featureData when subsetting a qPCRset
htqpcr
updated 7.3 years ago by • 0 • written 7.4 years ago by ▴ 40
0
votes
0
replies
897
views
Batch Correction in HTqPCR?
qPCR htqpcr
7.4 years ago bradley • 0
3
votes
1
reply
1.4k
views
Errors with HTqPCR v1.28.0 and BioC 3.4
HTqPCR
updated 7.4 years ago by ▴ 40 • written 7.6 years ago by ▴ 20
0
votes
1
reply
1.3k
views
HTqPCR: bug in subsetting qPCRset
HTqPCR htqpcr subsetting
updated 7.4 years ago by ▴ 40 • written 7.6 years ago by ★ 4.0k
3
votes
7
replies
2.1k
views
Subsetting qPCRset loses sample names, possibly due to change of assayDataElementReplace
HTqPCR
7.4 years ago henrik.seidel ▴ 40
0
votes
0
replies
831
views
HTqPCR - Multiple plates for multiple samples
htqpcr
7.7 years ago Angela LR • 0
0
votes
0
replies
953
views
HTqPCR limma decide test issue?
limma decide test HTqPCR
7.7 years ago polemiraza ▴ 70
0
votes
1
reply
1.4k
views
Possible bug in setCategory function from HTqPCR package
htqpcr HTqPCR
updated 7.7 years ago by • 0 • written 9.5 years ago by ▴ 830
0
votes
0
replies
761
views
setCategory flag and flag.pout argument problems
htqpcr
7.7 years ago h.roest • 0
0
votes
0
replies
1.1k
views
Combining TLDA cards for normalization
normalization microrna htqpcr
7.9 years ago jamie_jabalee • 0
1
vote
0
replies
2.0k
views
HTqPCR readCtData 12 samples x 63 genes - error: row names supplied are of the wrong length
HTqPCR readCtData Heidi Dvinge
8.2 years ago • updated 8.1 years ago virginia.claudio ▴ 10
0
votes
0
replies
1.1k
views
Error in readCtData
htqpcr readctdata connection readlines
8.2 years ago lizhensor • 0
0
votes
0
replies
939
views
Help with loading Data and reading Ct values
htqpcr
8.3 years ago Pheebz • 0
0
votes
0
replies
956
views
error in reading files using HTqPCR
htqpcr
10.6 years ago • updated 8.5 years ago Alex ▴ 10
0
votes
1
reply
1.2k
views
featureNames converted to numbers in limmaCtData
limma htqpcr
8.8 years ago julio.c.silver • 0
1
vote
7
replies
1.7k
views
limmaCTData Error requires ndups=2 even when there are no duplicate genes (should be ndups=1)
limma ndups htqpcr software error
updated 8.8 years ago by 51k • written 8.8 years ago by • 0
0
votes
0
replies
1.5k
views
Problems importing (new) LightCycler data to HTqPCR
htqpcr dataimport
9.1 years ago H.H. • 0
0
votes
2
replies
1.2k
views
HTqPCR + setting flags as unreliable problem
htqpcr flags setCategory
9.5 years ago samantha.smith-4 • 0
0
votes
0
replies
1.0k
views
Bugs in HTqPCR implementation of data normalization
Normalization HTqPCR Normalization HTqPCR
10.0 years ago Peter Langfelder ★ 3.0k
0
votes
0
replies
2.1k
views
reading qRT-PCR data
ddCt HTqPCR ReadqPCR ddCt HTqPCR ReadqPCR
10.1 years ago Guest User ★ 13k
0
votes
5
replies
1.5k
views
Reading in mutiple files using readCtData
HTqPCR HTqPCR
updated 10.3 years ago by 66k • written 10.3 years ago by ▴ 50
2
votes
1
reply
1.3k
views
HTqPCR- gene names not maintained in limmaCtData
annotate ddCt HTqPCR annotate ddCt HTqPCR
10.3 years ago Cornwell, Adam ▴ 110
50 results • Page 1 of 1
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Comment: Trouble reading samplesheet in with diffbind to create dba by Mallory • 0
Thank you for your reply! There mustve been something wierd going on with my peak formats as you pointed out. I recalled all the peaks and …
Answer: Trouble reading samplesheet in with diffbind to create dba by Anthony • 0
I was struggling with this today too. For me it happened because my peak files were not in the correct format. The "10 elements" refers to …
Comment: gds in GEOmetadb 2023-06-26 version is empty by Frederico Moraes Ferreira ▴ 100
Try axel -n 20 https://gbnci.cancer.gov/geo/GEOmetadb.sqlite.gz
Comment: Most enriched pathway is not expressed when modifying universe parameter by James W. MacDonald 66k
The default for `enrichGO` is to subset to those with a p-value<0.05. You don't adjust that default argument, so you shouldn't have any GO …
Answer: In a 3 group DEG analysis with three batches, can I use 1 group in all three bat by Michael Love 42k
You can compare A and C thanks to the sharing of samples from B across 1, 2 and 3.
Votes
Answer: How to do DESeq2 on Kallisto Data
Comment: Most enriched pathway is not expressed when modifying universe parameter
Time-course, comparison of two groups
Answer: Behaviour of featureCounts when quantifying multi-mapping reads
Answer: GESA with certain gene list returns no result with human genom, but many result
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