Showing : HtqPCR • reset
1
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5
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1.2k
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Manual creation of qPCRset does not work
bug nondetects HTqPCR
updated 2.1 years ago by • 0 • written 2.2 years ago by ▴ 230
0
votes
3
replies
887
views
Technical Replicates in HTqPCR
HTqPCR
written 2.2 years ago by ▴ 230
0
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0
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1.1k
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How to perform a cluster analysis in RT-qPCR or HT-qPCR results?
cluster qpcr qpcrNorm clusterProfiler HTqPCR
3.1 years ago Javier • 0
0
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0
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922
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Made a pDATA manually for HTqPCR procedure
HTqPCR phenoData esetVis pData
4.1 years ago Marcelo Laia ▴ 450
0
votes
0
replies
770
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Error when reading qPCR data in SDS format
HTqPCR
4.6 years ago Nghia • 0
1
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1
reply
1.7k
views
HTQPCR - create qPCR set from a matrix of CT values
HTqPCR
updated 4.8 years ago by 53k • written 10.0 years ago by ▴ 40
3
votes
4
replies
4.6k
views
Using limma for the analysis of qPCR data
NormqPCR EasyqpcR qPCR HTqPCR limma
updated 4.1 years ago by ▴ 380 • written 4.8 years ago by ▴ 680
0
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0
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788
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Problems creating qPCRset from RT2 array data with HTqPCR package
HTqPCR
5.4 years ago Maximilian Fuchs • 0
0
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0
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796
views
HTqPCR package, filterCategory function
HTqPCR filterCategory setCategory
updated 5.9 years ago by 68k • written 5.9 years ago by • 0
0
votes
0
replies
1.1k
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Sample grouping (phenoData) and visualization in R package- HtqPCR
HtqPCR grouping visualization R phenoData
6.3 years ago mohammedtoufiq91 ▴ 10
0
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0
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923
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Analyze ct data using HTqPCR
HTqPCR R NormqPCR
6.4 years ago annesha • 0
0
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0
replies
793
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Error with HTqPCR rbind
HTqPCR
6.5 years ago NAIARA GARCÍA ▴ 10
0
votes
1
reply
1.2k
views
HTqPCR: dealing with technical replicates (filterCategory) and inability to analyze datasets with filtered genes (limmaCtData).
limma htqpcr
updated 4.9 years ago by • 0 • written 6.9 years ago by • 0
0
votes
0
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916
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A problem about changeCtLayout in HTqPCR
htqpcr
6.9 years ago tropicalis • 0
0
votes
3
replies
1.3k
views
Creation of qPCRset in R for HtqPCR
R bioconductor htqpcr qpcrset object
7.1 years ago mohammedtoufiq91 ▴ 10
0
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0
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1.1k
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Creating qPCRset object from Bio-Rad CFX file
htqpcr limma
7.1 years ago dbars • 0
0
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0
replies
1.2k
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HTqPCR - unable to create a 'qPCRset' object
htqpcr expressionset
7.3 years ago jirkanov • 0
0
votes
0
replies
1.1k
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Inter-run calibration in HTqPCR R package
htqpcr R
7.5 years ago dbarscortina • 0
0
votes
0
replies
1.2k
views
Import problem with HTqPCR Fluidigm 96.96
htqpcr bioconductor fluidigm biomark
7.7 years ago reed27 • 0
0
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0
replies
1.1k
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HTqPCR for Fluidigm Results
htqpcr fluidigm
7.8 years ago rhonce • 0
0
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0
replies
1.1k
views
HTqPCR trouble with changeCtLayout
htqpcr qPCR
7.8 years ago samantha_jeschonek • 0
2
votes
2
replies
1.5k
views
Reading in delta Ct values using HTqPCR
htqpcr
updated 7.8 years ago by 53k • written 7.8 years ago by ▴ 10
0
votes
0
replies
966
views
Bugs in HTqPCR 1.30.0?
htqpcr
8.0 years ago h.roest • 0
1
vote
2
replies
1.7k
views
No differential expression with limmaCtData possible
limma htqpcr
8.0 years ago h.roest • 0
0
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0
replies
967
views
HTqPCR package: problems with the limmaCtData function
htqpcr
8.4 years ago Frederico Moraes Ferreira ▴ 100
0
votes
1
reply
1.3k
views
Problem duplicated samples for ChangeCtLayout in HTqPCR with fluidigm 96*96
htqpcr
8.6 years ago carine.genet • 0
0
votes
0
replies
1.1k
views
re-format data for HtqPCR
HtqPCR reshape
8.8 years ago Stefany Solano • 0
0
votes
1
reply
1.4k
views
HTqPCR cannot read more recent SDS files
htqpcr
updated 8.8 years ago by • 0 • written 8.8 years ago by ▴ 40
0
votes
3
replies
1.7k
views
HTqPCR does not copy featureData when subsetting a qPCRset
htqpcr
updated 8.8 years ago by • 0 • written 8.8 years ago by ▴ 40
0
votes
0
replies
1.1k
views
Batch Correction in HTqPCR?
qPCR htqpcr
8.8 years ago bradley • 0
3
votes
1
reply
1.7k
views
Errors with HTqPCR v1.28.0 and BioC 3.4
HTqPCR
updated 8.8 years ago by ▴ 40 • written 9.1 years ago by ▴ 20
0
votes
1
reply
1.6k
views
HTqPCR: bug in subsetting qPCRset
HTqPCR htqpcr subsetting
updated 8.8 years ago by ▴ 40 • written 9.0 years ago by ★ 4.1k
3
votes
7
replies
2.6k
views
Subsetting qPCRset loses sample names, possibly due to change of assayDataElementReplace
HTqPCR
8.8 years ago henrik.seidel ▴ 40
0
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0
replies
1.1k
views
HTqPCR - Multiple plates for multiple samples
htqpcr
9.1 years ago Angela LR • 0
0
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0
replies
1.2k
views
HTqPCR limma decide test issue?
limma decide test HTqPCR
9.2 years ago polemiraza ▴ 70
0
votes
1
reply
1.7k
views
Possible bug in setCategory function from HTqPCR package
htqpcr HTqPCR
updated 9.2 years ago by • 0 • written 11.0 years ago by ▴ 830
0
votes
0
replies
996
views
setCategory flag and flag.pout argument problems
htqpcr
9.2 years ago h.roest • 0
0
votes
0
replies
1.4k
views
Combining TLDA cards for normalization
normalization microrna htqpcr
9.3 years ago jamie_jabalee • 0
1
vote
0
replies
2.3k
views
HTqPCR readCtData 12 samples x 63 genes - error: row names supplied are of the wrong length
HTqPCR readCtData Heidi Dvinge
9.6 years ago virginia.claudio ▴ 10
0
votes
0
replies
1.3k
views
Error in readCtData
htqpcr readctdata connection readlines
9.6 years ago lizhensor • 0
0
votes
0
replies
1.2k
views
Help with loading Data and reading Ct values
htqpcr
9.7 years ago Pheebz • 0
0
votes
0
replies
1.2k
views
error in reading files using HTqPCR
htqpcr
12.1 years ago • updated 9.9 years ago Alex ▴ 10
0
votes
1
reply
1.5k
views
featureNames converted to numbers in limmaCtData
limma htqpcr
10.3 years ago julio.c.silver • 0
1
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7
replies
2.2k
views
limmaCTData Error requires ndups=2 even when there are no duplicate genes (should be ndups=1)
limma ndups htqpcr software error
updated 10.3 years ago by 53k • written 10.3 years ago by • 0
0
votes
0
replies
1.9k
views
Problems importing (new) LightCycler data to HTqPCR
htqpcr dataimport
10.6 years ago H.H. • 0
0
votes
2
replies
1.6k
views
HTqPCR + setting flags as unreliable problem
htqpcr flags setCategory
11.0 years ago samantha.smith-4 • 0
0
votes
0
replies
1.3k
views
Bugs in HTqPCR implementation of data normalization
Normalization HTqPCR Normalization HTqPCR
11.4 years ago Peter Langfelder ★ 3.0k
0
votes
0
replies
2.5k
views
reading qRT-PCR data
ddCt HTqPCR ReadqPCR ddCt HTqPCR ReadqPCR
11.6 years ago Guest User ★ 13k
0
votes
5
replies
2.0k
views
Reading in mutiple files using readCtData
HTqPCR HTqPCR
updated 11.8 years ago by 68k • written 11.7 years ago by ▴ 50
2
votes
1
reply
1.6k
views
HTqPCR- gene names not maintained in limmaCtData
annotate ddCt HTqPCR annotate ddCt HTqPCR
11.8 years ago Cornwell, Adam ▴ 110
134 results • Page 1 of 3
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Comment: gene Set with high AUC score but no cells assigned to cell type by gogeni5529 • 0
THIS is spam. How Do I delete it?
Comment: limpa - drivers for unusually high standard error? by Julia Broadbent • 0
Apologies for not being clearer in my initial question, but thank you for answering regardless! The large SE values I am looking at appear …
Answer: limpa - drivers for unusually high standard error? by Gordon Smyth 53k
Hi Julia, I am going to assume that you mean standard errors (SEs) returned by `dpcQuant()`, because later stages in the limpa pipeline do…
Comment: gene Set with high AUC score but no cells assigned to cell type by e.j.aaw.g.erm • 0
It sounds like AUCell is struggling with thresholding because your cDC2 gene set doesn t show a clear bimodal distribution. While a high AU…
Comment: featureCounts -L: high unassigned:mapq fraction by insurancetaaddddaxrealty • 0
FeatureCounts can behave differently with ONT cDNA BAM files due to long read splice patterns, and many users compare settings or presets m…
Votes
Answer: gene Set with high AUC score but no cells assigned to cell type
Answer: Highly similar RNA-seq samples in PCA - pooling or technical duplication?
Comment: Highly similar RNA-seq samples in PCA - pooling or technical duplication?
Answer: Post translational modifications and phosphoproteomics in limpa?
Answer: Post translational modifications and phosphoproteomics in limpa?
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