Bioconductor Shiny

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7.0k

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shiny package deploy

7.8 years ago lloyd.izard ▴ 80

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4.6k

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annotation genomicranges visualization docker shiny Tutorial

9.9 years ago Vincent J. Carey, Jr. 6.7k

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1.7k

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iSEE shiny summarizedExperiment News

6.8 years ago Aaron Lun ★ 29k

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1.9k

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SC3 single-cell shiny

updated 8.7 years ago by Vladimir Kiselev ▴ 150 • written 8.7 years ago by cfustero ▴ 20

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shiny network interactions

11.2 years ago pshannon ▴ 100

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cellcode shiny heatmap

updated 9.7 years ago by Andrzej Oleś ▴ 750 • written 9.7 years ago by christopher.clarskon15 ▴ 20

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1.6k

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shiny

updated 9.2 years ago by Martin Morgan 25k • written 9.2 years ago by bhakti.dwivedi • 0

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2.1k

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ChAMP Epigenetics plotly Shiny GUI News

9.2 years ago • updated 9.0 years ago Yuan Tian ▴ 90

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2.2k

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limmagui shiny

9.8 years ago christopher.clarskon15 ▴ 20

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2.1k

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rtracklayer browsegenome shiny

updated 7.3 years ago by Michael Lawrence ★ 11k • written 7.3 years ago by vivek82 • 0

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2.6k

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DEBrowser shiny

7.0 years ago tomasfly • 0

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2.2k

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deseq2 shiny design rhandsontable hot_to_r()

updated 6.9 years ago by Michael Love 43k • written 6.9 years ago by hinkel2 • 0

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2.1k

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R validate shiny

10.3 years ago alptaciroglu ▴ 50

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1.4k

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AnnotationHub Shiny Rstudio

updated 5.9 years ago by shepherl 4.3k • written 5.9 years ago by bwiley4 • 0

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1.2k

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BatchQC RNA-seq R Shiny batch-effect

5.8 years ago manninm • 0

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986

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shiny EBImage

3.5 years ago Wolfgang Huber ★ 13k

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1.4k

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ChAMP shiny ChAMPdata

updated 3.8 years ago by anna.stanislawska • 0 • written 3.9 years ago by Mari • 0

17 results • Page 1 of 1

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Answer: Are individual-mouse-based statistics possible in CellChat? by ATpoint ★ 5.0k

Not a Bioconductor package, I commented on the crosspost at https://www.biostars.org/p/9617271/

Comment: DESeq2 - how to shrink LFC for pairwise comparisons having multiple groups by ATpoint ★ 5.0k

apeglm is more cumbersome than ashr as with apeglm the coefficients need to be explicitely available in the resultsNames.So, you need to re…

Comment: BiocParallel (and DESeq2) - wrong args for environment subassignment by Martin Morgan 25k

I see rstudioapi in the `sessionInfo()`. RStudio does not support forked ('multicore') processes. Does the BiocParallel example work when y…

Comment: BiocParallel (and DESeq2) - wrong args for environment subassignment by Michael Love 43k

Given that this is an issue with BiocParallel on your machine and we have a minimal reproducible example, you may want to repost the issue.…

Comment: BiocParallel (and DESeq2) - wrong args for environment subassignment by Benjamin • 0

Still happening using pre-existing size factors estimating dispersions gene-wise dispersion estimates: 15 workers mean-dis…

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A: Filtering read counts matrix: how to deal with duplicated gene symbols, differen

Comment: limpa analysis advice

Answer: When to use edgeR or limma

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