Showing : affylmGUI • reset
2
votes
8
replies
1.3k
views
AffylmGUI does not start wit R 4.4.1
affylmGUI
updated 13 months ago by 53k • written 14 months ago by ▴ 30
1
vote
6
replies
1.8k
views
Error while running affylmGUI
microarray limma affy affylmGUI
updated 6.7 years ago by 53k • written 6.7 years ago by • 0
0
votes
2
replies
2.9k
views
How to convert probe sets to Gene symbols ?
affylmgui affymetrix microarrays hgu133plus2
updated 9.9 years ago by ▴ 370 • written 9.9 years ago by • 0
0
votes
3
replies
1.7k
views
affylmGUI affy affymetrix
affylmgui
updated 9.9 years ago by 53k • written 9.9 years ago by • 0
0
votes
4
replies
1.8k
views
Regarding CDF file
cdf affylmGUI cdf affylmGUI
updated 12.4 years ago by 68k • written 12.4 years ago by ▴ 170
0
votes
1
reply
1.3k
views
AffylmGUI freezes with recent updates of Windows 7 Enterprise Service Pack 1
Cancer affylmGUI Cancer affylmGUI
updated 12.8 years ago by ▴ 450 • written 12.8 years ago by ★ 2.0k
0
votes
1
reply
1.6k
views
Regarding CDF & annotation package
Microarray Annotation affylmGUI Microarray Annotation affylmGUI
updated 13.0 years ago by ★ 4.1k • written 13.0 years ago by ▴ 10
0
votes
1
reply
1.5k
views
(microarray) - affylmGUI error when reading Affymetrix U133A and U133B .CEL file
Microarray PROcess affylmGUI Microarray PROcess affylmGUI
updated 13.1 years ago by 68k • written 13.1 years ago by ▴ 30
0
votes
8
replies
2.2k
views
affylmGUI/biocReposList() Problem
affylmGUI affylmGUI
updated 13.3 years ago by 68k • written 13.3 years ago by ▴ 30
0
votes
0
replies
1.3k
views
problems with oneChannelGUI
affylmGUI oneChannelGUI ASSIGN affylmGUI oneChannelGUI ASSIGN
13.6 years ago Manuela Di Russo ▴ 70
0
votes
2
replies
2.2k
views
Tktable 2.9 makefile problem
GO affylmGUI GO affylmGUI
updated 13.6 years ago by 25k • written 13.6 years ago by ▴ 10
0
votes
4
replies
2.9k
views
tcltk package for R 2.14.1
affylmGUI BiocInstaller affylmGUI BiocInstaller
updated 13.8 years ago by ★ 8.2k • written 13.8 years ago by ▴ 70
0
votes
0
replies
1.3k
views
TopTable function in affylmGUI does not have Gene names
affylmGUI affylmGUI
13.9 years ago Guest User ★ 13k
0
votes
2
replies
1.4k
views
affylmGUI annotations
Annotation annotate affylmGUI Annotation annotate affylmGUI
updated 14.2 years ago by ★ 2.0k • written 14.2 years ago by ▴ 30
0
votes
0
replies
1.3k
views
Issues running affylmGUI
Cancer Breast affylmGUI Cancer Breast affylmGUI
14.9 years ago Lorenzo Melchor ▴ 50
0
votes
0
replies
1.1k
views
[R] Problems in running affylmGUI
Cancer Breast affylmGUI Cancer Breast affylmGUI
14.9 years ago James W. MacDonald 68k
0
votes
8
replies
2.5k
views
oneChannelGUI
Rgraphviz affylmGUI oneChannelGUI Rgraphviz affylmGUI oneChannelGUI
updated 15.0 years ago by ▴ 500 • written 15.0 years ago by ▴ 200
0
votes
0
replies
1.2k
views
Different result from gcrma function by using command line gcrma, affylmGUI and oneChannelGUI.
gcrma affylmGUI oneChannelGUI gcrma affylmGUI oneChannelGUI
15.2 years ago Lin Ying ▴ 10
0
votes
1
reply
1.2k
views
Difficulty installing oneChannelGUI in Vista
Cancer affylmGUI oneChannelGUI Cancer affylmGUI oneChannelGUI
updated 15.4 years ago by 68k • written 15.4 years ago by ★ 2.0k
0
votes
1
reply
1.2k
views
Unique CDF File
cdf affylmGUI cdf affylmGUI
updated 15.5 years ago by ★ 6.5k • written 15.5 years ago by ▴ 10
0
votes
0
replies
1.1k
views
affylmGUI MA-plot using Gene Symbols
Microarray Annotation hgu133plus2 probe affy affylmGUI Microarray Annotation hgu133plus2
15.8 years ago Chuming Chen ▴ 140
0
votes
0
replies
1.1k
views
Problems with Affylimma and AffylmGUI
cdf affylmGUI cdf affylmGUI
15.8 years ago Maxim ▴ 170
0
votes
0
replies
1.1k
views
affylmGUI
affy affylmGUI affy affylmGUI
16.0 years ago A. de Lang ▴ 10
0
votes
0
replies
958
views
Expression values from gcRMA are different than before
gcrma affylmGUI gcrma affylmGUI
16.1 years ago Glyn Bradley ▴ 40
0
votes
0
replies
1.3k
views
Bioconductor does not provide Humane gene ST, annotation "hugene10stv1cdf" to work with affylmGUI?!
Annotation cdf affylmGUI Annotation cdf affylmGUI
16.1 years ago rcaloger ▴ 500
0
votes
2
replies
1.5k
views
Bioconductor does not provide Humane gene ST annotation "hugene10stv1cdf" to work with affylmGUI?!
Annotation cdf affylmGUI Annotation cdf affylmGUI
updated 16.1 years ago by ★ 7.2k • written 16.1 years ago by ▴ 10
0
votes
7
replies
2.3k
views
Missing GeneSymbol and Name information in TopTable
Annotation hgu133plus2 annaffy affylmGUI Annotation hgu133plus2 annaffy affylmGUI
updated 16.2 years ago by ★ 7.2k • written 16.2 years ago by ▴ 40
0
votes
1
reply
1.2k
views
Affy huGENE ST arrays
cdf affy affylmGUI cdf affy affylmGUI
updated 16.2 years ago by ★ 7.2k • written 16.2 years ago by ▴ 10
0
votes
2
replies
1.3k
views
R scripts from AffylmGUI
Microarray affylmGUI Microarray affylmGUI
updated 16.3 years ago by ▴ 450 • written 16.3 years ago by ▴ 200
0
votes
0
replies
1.0k
views
analyze/import my normalized/summarized affy data in affylmGUI
cdf affylmGUI cdf affylmGUI
16.5 years ago shirley zhang ★ 1.0k
0
votes
4
replies
1.7k
views
Exon Array analysis
cdf affylmGUI cdf affylmGUI
updated 16.6 years ago by ▴ 500 • written 16.6 years ago by ▴ 10
0
votes
1
reply
1.0k
views
Please add hugene10stv1.cdf
cdf limma affylmGUI cdf limma affylmGUI
updated 16.6 years ago by 68k • written 16.6 years ago by ▴ 10
0
votes
8
replies
2.0k
views
affylmGUI segfault on "pd.ragene.1.0.st.v1"
Normalization GO cdf affy affylmGUI Normalization GO cdf affy affylmGUI
updated 16.8 years ago by ★ 13k • written 16.8 years ago by ▴ 70
0
votes
18
replies
3.5k
views
LPE error caused by gcRMA [Error in var.M.adap[i] <- ifelse(!is.na(var.M.adap[i - 1]), mean(var.M.adap[i + : replacement has length zero]
Cancer gcrma LPE affylmGUI Cancer gcrma LPE affylmGUI
updated 17.0 years ago by ▴ 70 • written 17.0 years ago by ★ 13k
0
votes
6
replies
2.9k
views
Is anyone developing an extensible Galaxy-like interface for Bioconductor?
affylmGUI limmaGUI affylmGUI limmaGUI
updated 17.2 years ago by ▴ 10 • written 17.3 years ago by ▴ 50
0
votes
2
replies
1.8k
views
Is anyone developing an extensible Galaxy-like interface for Bioconductor?
affylmGUI limmaGUI affylmGUI limmaGUI
updated 17.2 years ago by ▴ 90 • written 17.3 years ago by ▴ 140
0
votes
0
replies
1.2k
views
Is anyone developing an extensible Galaxy-like interface for Bioconductor?
Cancer affylmGUI limmaGUI Cancer affylmGUI limmaGUI
17.3 years ago Martin Morgan 25k
0
votes
0
replies
1.9k
views
Cutoff to use for IQR filtering in genefilter
genefilter affy limma GeneSpring affylmGUI GLAD SIM genefilter affy limma GeneSpring
17.4 years ago Mark Cowley ▴ 400
0
votes
3
replies
3.9k
views
Cutoff to use for IQR filtering in genefilter
affylmGUI affylmGUI
updated 17.4 years ago by ▴ 400 • written 17.4 years ago by ▴ 80
0
votes
1
reply
1.2k
views
how to import mas5 data into expresso (affy package)
Microarray limma PROcess affylmGUI Microarray limma PROcess affylmGUI
updated 17.4 years ago by 68k • written 17.4 years ago by ▴ 80
0
votes
1
reply
1.1k
views
default fdr rate in limma/affylmgui
affylmGUI affylmGUI
updated 17.6 years ago by 68k • written 17.6 years ago by ▴ 420
0
votes
0
replies
1.1k
views
custom affylmGUI menus
Normalization vsn affylmGUI Normalization vsn affylmGUI
17.9 years ago Stefanie De Bodt ▴ 10
0
votes
3
replies
1.5k
views
R crashes after image array plots hgu133plus2 in R2.6.0
GUI hgu133plus2 affy limma affylmGUI GUI hgu133plus2 affy limma affylmGUI
updated 18.0 years ago by 25k • written 18.0 years ago by ★ 2.0k
0
votes
0
replies
944
views
affylmGUI: options for 'Export HTML Report'?
PROcess affylmGUI PROcess affylmGUI
18.1 years ago Keith Satterley ▴ 450
0
votes
1
reply
1.5k
views
An error of affylmGUI
cdf affy affylmGUI affyio cdf affy affylmGUI affyio
updated 18.2 years ago by ▴ 450 • written 18.2 years ago by ▴ 450
0
votes
0
replies
811
views
affylmGUI 1.10.4 fixes 3 errors in Bioconductor release version
affylmGUI affylmGUI
18.4 years ago Keith Satterley ▴ 450
0
votes
3
replies
1.7k
views
limma gene symbol not avialable problem
cdf affy affydata limma affylmGUI affyio cdf affy affydata limma affylmGUI affyio
updated 18.4 years ago by 68k • written 18.4 years ago by ▴ 450
0
votes
0
replies
970
views
affylmGUI ver 1.10.2 bug fix in release branch
affylmGUI affylmGUI
18.4 years ago Keith Satterley ▴ 450
0
votes
0
replies
3.2k
views
Tcl/TK package "Bwidget" when using limmaGUI or affylmGUI
limmaGUI affylmGUI
updated 14 months ago by 53k • written 18.5 years ago by ▴ 450
0
votes
5
replies
1.5k
views
CDF/Probe/Annotation for GNF1m custom chip
cdf probe affylmGUI cdf probe affylmGUI
updated 18.6 years ago by ★ 6.5k • written 18.6 years ago by ▴ 830
92 results • Page 1 of 2
Recent ...
Replies
Comment: "Watched Tags" are being erased rather than updated by shepherl 4.2k
I can reproduce this and have opened an issue on the code base https://github.com/Bioconductor/support.bioconductor.org/issues/112
Comment: "Watched Tags" are being erased rather than updated by shepherl 4.2k
we can investigate this issue. thank you for bringing it to our attention
Comment: deseq2 filter the low counts by Michael Love 43k
> But within each comparison (contrast), if I trace some DEGs back to the original salmon merged gene counts (or even to normalised counts)…
Comment: deseq2 filter the low counts by empty_mt • 0
Thank you for you suggestion to look at the pre-filtering section in the DESeq2 vignettes - am I missing something? I have 6 treatments, …
Comment: deseq2 filter the low counts by Michael Love 43k
Have you seen this part: https://bioconductor.org/packages/release/bioc/vignettes/DESeq2/inst/doc/DESeq2.html#pre-filtering
Votes
Bioconductor 3.22 Released!
Bioconductor 3.22 Released!
Comment: "Watched Tags" are being erased rather than updated
Comment: deseq2 filter the low counts
Answer: DESeq2 interactions
Awards • All
Popular Question to shepherl 4.2k
Popular Question to Hervé Pagès 16k
Popular Question to Ou, Jianhong ★ 1.3k
Popular Question to Maria Doyle ▴ 100
Popular Question to Gordon Smyth 53k
Locations • All
WEHI, Melbourne, Australia, 6 minutes ago
The city by the bay, 21 minutes ago
Seattle, WA, United States, 22 minutes ago
United States, 40 minutes ago
United States, 48 minutes ago
Traffic: 909 users visited in the last hour
Content Search
Users
Tags
Badges
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6