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bioconductor
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News:
Nominations for Bioconductor Awards 2024! Deadline May 15
Recognition
Awards
Bioconductor
Bioc204
6 weeks ago • updated 7 hours ago
shepherl
3.9k
0
votes
1
reply
56
views
Recovering my account credentials on Bioconductor
Bioconductor
updated 2 days ago by
shepherl
3.9k • written 2 days ago by
cyril.dalmasso
• 0
4
votes
0
replies
98
views
News:
Bioconductor 3.19 is Released!
Release
Bioconductor
Packages
Software
8 days ago
shepherl
3.9k
0
votes
0
replies
78
views
News:
BioC2024 deadlines approaching
BioC2024
Bioconductor
Community
9 days ago
Maria Doyle
▴ 70
1
vote
0
replies
304
views
Tutorial:
Installing/switching between versions of R/Rstudio/Bioconductor on personal machine (Linux | Ubuntu)
bioconductor
Install
20 days ago
BioinfGuru
▴ 30
3
votes
18
replies
2.9k
views
News:
List of Deprecated Packages for Bioc3.18
Deprecation
devel
Bioconductor
Devel
10 months ago • updated 22 days ago
shepherl
3.9k
0
votes
0
replies
89
views
News:
Important Release 3.18 Freeze Announcment
Release
release
Bioconductor
Bioconducto
27 days ago
shepherl
3.9k
0
votes
7
replies
413
views
Internet connection for Bioconductor packages in Rstudio in Iran...
No_internet_connection_Packages
Proxy
Bioconductor
GEOquery
Internet_connection_problem
5 weeks ago
needNGS
• 0
0
votes
2
replies
182
views
bioconductor emailing list
Bioconductor
updated 6 weeks ago by
shepherl
3.9k • written 6 weeks ago by
1427972815
• 0
0
votes
0
replies
149
views
News:
Deadline Extended - BioC2024 Abstracts and Sticker Contest - April 1st!
BioC2024
Conference
Bioconductor
6 weeks ago
Maria Doyle
▴ 70
1
vote
2
replies
265
views
supportedOrganisms() in goseq producing Error in names(trackIds)
goseq
Bioconductor
rtracklayer
9 weeks ago
thomas
• 0
1
vote
0
replies
278
views
News:
Nominations for Bioconductor Awards 2024!
Recognition
Awards
Bioconductor
Bioc2024
11 weeks ago • updated 9 weeks ago
shepherl
3.9k
0
votes
1
reply
314
views
News:
BioC2024 abstract submission is open!
BioC2024
Conference
Bioconductor
updated 7 weeks ago by
howell
• 0 • written 11 weeks ago by
Maria Doyle
▴ 70
0
votes
0
replies
180
views
News:
BioC2024 registration is now open!
BioC2024
Conference
Bioconductor
Community
9 weeks ago
Maria Doyle
▴ 70
6
votes
11
replies
1.0k
views
Packages don't update, but no error or warning is thrown
Bioconductor
3 months ago • updated 11 weeks ago
gernophil
• 0
0
votes
0
replies
180
views
News:
EuroBioC2024 abstract submission is open!
Conference
Bioconductor
EuroBioC2024
12 weeks ago
Maria Doyle
▴ 70
2
votes
0
replies
246
views
News:
Upholding our core values: a reminder of the Bioconductor Code of Conduct
Bioconductor
12 weeks ago
Maria Doyle
▴ 70
0
votes
1
reply
238
views
Bioconductor: Won't Update to 3.18 with Default Command
Bioconductor
updated 12 weeks ago by
Lluís Revilla Sancho
▴ 730 • written 12 weeks ago by
vanbelj
▴ 30
1
vote
4
replies
441
views
Can't post a question containing code?
Bioconductor
updated 12 weeks ago by
Lluís Revilla Sancho
▴ 730 • written 12 weeks ago by
DS
▴ 10
0
votes
1
reply
205
views
Limitation on single file size and package size when developing Bioc package
packagedevelopment
datalimit
Bioconductor
updated 3 months ago by
Hervé Pagès
16k • written 3 months ago by
Xin Wang
• 0
0
votes
0
replies
243
views
News:
Note about packages submitted for Bioconductor 3.19
Release
Submission
release
Bioconductor
3 months ago
shepherl
3.9k
2
votes
1
reply
284
views
News:
"Edit" button not working
Bioconductor
Website
SupportSite
updated 3 months ago by
Lori
• 0 • written 3 months ago by
shepherl
3.9k
2
votes
2
replies
316
views
How to contact Bioconductor's test host?
Bioconductor
updated 3 months ago by
Hervé Pagès
16k • written 3 months ago by
Marek Gierlinski
▴ 30
0
votes
4
replies
768
views
Bioconductor installation
Bioconductor
written 4 months ago by
Akhil
• 0
4
votes
3
replies
345
views
Bioconductor code browser time out
Bioconductor
updated 4 months ago by
Mike Smith
★ 6.5k • written 4 months ago by
Marek Gierlinski
▴ 30
3
votes
1
reply
322
views
News:
Bioconductor.org has a new look!
Bioconductor
Website
written 4 months ago by
shepherl
3.9k
0
votes
0
replies
280
views
News:
Online course - FLOW CYTOMETRY DATA ANALYSIS WITH R/BIOCONDUCTOR
Bioconductor
FlowCytometryData
FlowCytometry
4 months ago
info
▴ 10
0
votes
3
replies
1.6k
views
Error in library(oligo) : package or namespace load failed for ‘oligoClasses’
R
oligoClasses
Oligoclass
Bioconductor
Oligo
written 3.2 years ago by
tanya
• 0
1
vote
5
replies
2.2k
views
pd.mogene.2.0st Error Installing in R 3.1.2
oligo
microarray
r
bioconductor
written 9.2 years ago by
chandlerjd58
▴ 10
5
votes
1
reply
447
views
News:
Bioconductor 3.18 is Released!
Packages
Bioconductor
Release
Software
written 6 months ago by
shepherl
3.9k
0
votes
0
replies
248
views
Normalising processed Proteomics data in R
Bioconductor
Proteomics
5 months ago
Joshua
• 0
0
votes
6
replies
2.2k
views
Error when Installing BioConductor Package ('affy')
Bioconductor
Install
affy
updated 5 months ago by
ATpoint
★ 4.1k • written 17 months ago by
laujihen
• 0
2
votes
0
replies
487
views
News:
Bioconductor's Transition Away from Twitter/X
Bioconductor
5 months ago
Maria Doyle
▴ 70
0
votes
0
replies
290
views
News:
CRAN downtime
BiocManager
Bioconductor
5 months ago
shepherl
3.9k
2
votes
4
replies
633
views
Import a Bioconductor package that is only used in a vignette/.Rmd script
Bioconductor
PackageType
BiocStyle
updated 6 months ago by
shepherl
3.9k • written 6 months ago by
lavanilla44
• 0
0
votes
2
replies
800
views
Job:
Bioinformatics Laboratory Head in AI or machine learning (WEHI, Australia)
bioconductor
artificialintelligence
JobPosting
machinelearning
written 8 months ago by
Gordon Smyth
50k
0
votes
3
replies
564
views
Support for installation and usage of TxDb.Hsapiens.UCSC.hg19.knownGene package in R version 4.2.2
Bioconductor
BiocPkgTools
6 months ago
blessybo
• 0
0
votes
1
reply
344
views
Advice needed on package using online databases (fails CHECK when database is down)
Bioconductor
updated 6 months ago by
shepherl
3.9k • written 6 months ago by
Marek Gierlinski
▴ 30
4
votes
10
replies
1.8k
views
Archives prior to 3.15 gone
archive
bioconductor
updated 6 months ago by
shepherl
3.9k • written 19 months ago by
Florian Finkernagel
▴ 30
0
votes
0
replies
370
views
News:
COURSE - Developing R/Bioconductor Packages for Genomics
Bioconductor
PackageTypeData
PackageType
6 months ago
info
▴ 10
2
votes
1
reply
859
views
limma::topTable with adjust.method=NULL is not BH corrected (manual is inconsistent with behavior?)
Bioconductor
biocon
limma
updated 7 months ago by
Gordon Smyth
50k • written 7 months ago by
ningyuan
• 0
2
votes
11
replies
944
views
Error MakeOrgPackagefromNCBI
Bioconductor
updated 3 months ago by
Guido Hooiveld
★ 3.9k • written 7 months ago by
cinzia.spagnoli
• 0
5
votes
2
replies
769
views
ComBat_seq function in sva package does not return a matrix
sva
ComBat
ComBat-seq
Bioconductor
ComBat_seq
7 months ago
Federico
▴ 10
0
votes
2
replies
655
views
For R version 4.0.2 and Biconductor version 3.11, clusterProfiler is not working
Bioconductor
clusterProfiler
updated 7 months ago by
James W. MacDonald
65k • written 7 months ago by
nilanjanamani88
• 0
0
votes
2
replies
1.1k
views
Bioconductor version cannot be validated
Bioconductor
updated 6 months ago by
Manuel
• 0 • written 7 months ago by
xlu.cpu
• 0
0
votes
1
reply
3.6k
views
Bioconductor version cannot be validated
Bioconductor
Annotation
Ann
updated 7 months ago by
James W. MacDonald
65k • written 7 months ago by
Aytaç
• 0
0
votes
2
replies
950
views
MACS2 not installing
Bioconductor
8 months ago
alia.sinqua
• 0
0
votes
0
replies
632
views
NAs in tabular output from DNAcopy
Bioconductor
DNAcopy
8 months ago
NewtoBioconductor
• 0
1
vote
4
replies
773
views
running Bioconductor Docker images only works with versions <= 3.15
Bioconductor
8 months ago
patrick.turko
• 0
0
votes
1
reply
397
views
Package "Netboost" is an Unix-only package, how can I install it in R?
Bioconductor
netboost
updated 8 months ago by
ATpoint
★ 4.1k • written 8 months ago by
laura1_z
• 0
50 results • Page
1 of 1
Recent ...
Replies
Comment: How to use bootRanges to bootstrap small RNA loci (nullranges package)
by
Poonam
• 0
That ll be helpful. Thank you.
Comment: Log-cpm values from limma
by
Shaimaa Gamal
• 0
I have performed RUVg correction and extracted W, factors of unwanted variation. According to limma guide, > In the limma approach to RNA…
Comment: DSS CpG coverage threshold
by
j.gilbert
• 0
Might be a bit late for the original poster :') but in case anyone else is wondering, the DSS user guide says: *Q: Do I need to filter out…
Comment: How to use bootRanges to bootstrap small RNA loci (nullranges package)
by
Michael Love
42k
Segmentation is of the whole genome, I'll write some code for doing this later today.
Comment: How to use bootRanges to bootstrap small RNA loci (nullranges package)
by
Michael Love
42k
I'll take a look later. For next time, I've edited your post by enclosing the code in triple backticks (on their own link). This properly …
Votes
Bioconductor 3.19 is Released!
A: Volcanoplot with limma - RAW P-values or Adj.P-Values
Answer: Mac ARM64 build report for BioC 3.19 from 'kjohnson3' reporting ERROR which it
Comment: Mac ARM64 build report for BioC 3.19 from 'kjohnson3' reporting ERROR which it
Answer: minfi latest update for EPIC V2 chip
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42k
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