Bioconductor Genome

Showing : genome • reset

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460

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ensembldb transcriptome genome coordinateconversion

updated 8 months ago by Michael Love 43k • written 8 months ago by saadmurtazakhan ▴ 10

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847

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build genome

21 months ago Dmitry • 0

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3.2k

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Genome bwamem ChIPSeqData index

updated 21 months ago by ATpoint ★ 4.6k • written 22 months ago by Maka • 0

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1.3k

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Alignment Genome

3.2 years ago • updated 3.1 years ago Charles Plessy ▴ 180

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1.6k

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Genome readVcf VariantAnnotation

3.8 years ago naive • 0

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1.3k

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Genome GWASdata

3.8 years ago Jocelyn • 0

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1.2k

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annotation genome hg38 TxDb.Hsapiens.UCSC.hg38.knownGene BSgenome.Hsapiens.UCSC.hg38

updated 4.8 years ago by kayla.interdonato ▴ 160 • written 4.8 years ago by jam526 • 0

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1.3k

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Gviz R UCSC Tracks genome locusplot

updated 5.1 years ago by Robert Ivanek ▴ 750 • written 5.2 years ago by s.koturan • 0

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1.1k

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single cell bioinformatics genome sequencing Job

5.2 years ago jmaanaki • 0

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2.3k

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annotation gff3 gff genome

updated 5.3 years ago by Michael Lawrence ★ 11k • written 5.3 years ago by mictadlo ▴ 10

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3.0k

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txdb genome exons

updated 5.4 years ago by Martin Morgan 25k • written 5.4 years ago by Bogdan ▴ 670

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1.0k

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single cell genome cancer Job

5.5 years ago jmaanaki • 0

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1.0k

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genome novel package release

updated 5.9 years ago by James W. MacDonald 67k • written 5.9 years ago by pertille • 0

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1.4k

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multiplealignment genome

6.2 years ago Giuseppe ▴ 20

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1.4k

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r build genome chicken-sheme

9.1 years ago pertille • 0

15 results • Page 1 of 1

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Answer: Limma - using both array and spot weights in lmFit by Gordon Smyth 52k

Was answered here: https://support.bioconductor.org/p/17028/

Comment: Easiest way to convert read10xMolInfo data into a dataframe in R with gene label by daldabrown9 • 0

For more info visit us on [R350 status check][1] [1]: https://sassagrantstatuscheck.co.za/

Answer: Margins for gene_set_enrichment_plot by Leonardo Collado Torres ★ 1.1k

Hi, In version 1.19.4 of `spatialLIBD` @lahuuki re-implemented the `gene_set_enrichment_plot()` function using `ComplexHeatmap::Heatmap(…

Comment: miRTarRnaseq library by mercedeh.movassagh ▴ 20

Maria please read the mirTarRnaSeq paper. In particular, Supplemental Table 2, clarifies all the statistical models, inputs and outputs. If…

Comment: Help using rtracklayer for gene ID extraction by James W. MacDonald 67k

Telling me you can't do something without showing what you tried is not helpful. When posting here, try to put yourself in the shoes of peo…

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FeatureCounts Output Counts at Exon Level Using Default Settings, want gene level

Answer: FeatureCounts Output Counts at Exon Level Using Default Settings, want gene leve

Whether to build DESeq2 model with all data and then contrast groups or subset groups first, build model and then contrast?

Answer: Feature Counts - potential bug with outfile.jcounts

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