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825
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updated 9 months ago by
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751
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4
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rama
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120
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2.1k
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340
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380
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40
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340
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20
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340
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280
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Comment: how many significant figures are there in DESeq2 output
by
Matthew McCormack
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Thank you for your reply. It is good to know that cutoff of 0.05 means less than 0.05.
My concerns are about consistency and reproducibili…
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No, normalization factors from edgeR rather than size factors from DESeq2 are not proportional, it's a different concept and implementation…
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ATpoint
★
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I strongly recommend to not concern yourself with these sorts of marginal problems because you're entering a realm in which you're entirely…
Comment: Problem using locateVariants() from the VariantAnnotation package
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Marco
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Ok, I think I found the problem. By looking at the `locateVariants()` source code, I was able to pinpoint that the problems is when trying …
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As described on the [github](https://github.com/hovestadtlab/conumee2) the way to do this is using array_type = c("EPIC", "EPICv2")
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