Bioconductor Matrix

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6.7k

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runUMAP scater Matrix

updated 9 weeks ago by Hervé Pagès 16k • written 5 months ago by inzirio ▴ 10

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3.2k

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matrix heatmap ComplexHeatmap missing values R

updated 4.6 years ago by Zuguang Gu ▴ 260 • written 4.6 years ago by mohammedtoufiq91 ▴ 10

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2.5k

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S4Vectors Matrix

7.3 years ago • updated 7.2 years ago peter.kharchenko ▴ 30

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2.4k

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geoquery summarizedexperiment GEO matrix

updated 6.4 years ago by Sean Davis 21k • written 6.4 years ago by rbronste ▴ 60

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2.3k

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diffbind bigmemory matrix dba.count

updated 8.7 years ago by Rory Stark ★ 5.2k • written 8.7 years ago by enricoferrero ▴ 660

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2.3k

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deseq2 bioconductor matrix

6.6 years ago victoria.carla.moris • 0

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2.0k

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flowcore fcs flow cytommetry matrix conversion

updated 4.9 years ago by Jake Wagner ▴ 310 • written 4.9 years ago by apurva • 0

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1.9k

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dexseq fit matrix warning

updated 2.5 years ago by koushik • 0 • written 7.3 years ago by Assa Yeroslaviz ★ 1.5k

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1.7k

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matrix text

8.8 years ago Angel ▴ 40

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1.4k

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matrix DESeq2 SmallRNA dimensions small

2.7 years ago andreia ▴ 10

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1.4k

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diffbind matrix summarizedexperiment rangedCounts

updated 4.6 years ago by Rory Stark ★ 5.2k • written 4.6 years ago by rbronste ▴ 60

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1.3k

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edger rna-seq matrix

updated 4.3 years ago by James W. MacDonald 65k • written 4.3 years ago by alihakimzadeh73 • 0

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1.3k

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edger design matrix de

updated 5.2 years ago by Aaron Lun ★ 28k • written 5.2 years ago by takumima ▴ 10

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1.3k

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DESeq2 design formula matrix

updated 5.9 years ago by Michael Love 42k • written 5.9 years ago by t.kuilman ▴ 170

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1.3k

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sva variable of ineterest matrix

updated 7.4 years ago by Jeff Leek ▴ 650 • written 7.4 years ago by reyhan.sonmez • 0

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1.2k

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design edgeR matrix RNA-seq MDplot

updated 2.9 years ago by Gordon Smyth 50k • written 3.0 years ago by Alex • 0

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1.1k

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R python normalization matrix

updated 4.7 years ago by shahryary ▴ 30 • written 4.7 years ago by mohammedtoufiq91 ▴ 10

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981

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RNAseq Design Matrix

2.5 years ago Barista • 0

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951

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matrix

updated 5.9 years ago by Axel Klenk ★ 1.0k • written 5.9 years ago by yueli7 ▴ 20

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886

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microarray dge matrix makecontrasts limma

updated 3.8 years ago by Gordon Smyth 50k • written 3.8 years ago by June. ▴ 10

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862

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matrix

updated 8.6 years ago by andrew.j.skelton73 ▴ 370 • written 8.6 years ago by BenAbflack • 0

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792

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matrix

updated 6.0 years ago by Martin Morgan 25k • written 6.0 years ago by ahmad.iut • 0

22 results • Page 1 of 1

Recent ...

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Comment: Can't post a question containing code? by NATASHA • 0

did you find a solution? I´m having the same problem

Comment: error by NATASHA • 0

Please ignore, i didnt copy all the scrip

Comment: Extremely small p-values using Limma for proteomic data by James W. MacDonald 65k

If you ever find yourself using the `@` function, you should reconsider what you are doing. There are vanishingly small instances when an e…

Comment: How to use bootRanges to bootstrap small RNA loci (nullranges package) by Michael Love 42k

Here is some example code <https://gist.github.com/mikelove/cbbc84634b6854c865cb5eb08ad9b245>

Comment: How to use spike-in information (sequences from another species) with DESeq2::DE by maria.soler • 0

Hi, I have a question barely related to this topic. Do you use a custom reference genome combining your organism and the one used as a spik…