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Showing :
workflows
•
reset
2
votes
5
replies
2.1k
views
Workflow highthroughputassays can't install properly
workflows
flowcore
flowstats
flowworkspace
7.2 years ago
kristoffer.haurum
• 0
2
votes
5
replies
3.0k
views
Programs used in RNA-seq workflow
deseq2
bioconductor
workflows
differential gene expression
rnaseqgene
8.1 years ago
cirisarri95
• 0
3
votes
7
replies
2.5k
views
Workflows in BioC 3.2
workflows
installation
biocinstaller
updated 8.3 years ago by
angela.oliveira.pisco
• 0 • written 8.5 years ago by
davide risso
▴ 950
1
vote
4
replies
1.5k
views
Does BiocWorkflowTools package generate F1000Reseach/Bioconductor-stype PDF at once?
workflows
biocworkflowtools
bioconductor
5.9 years ago
Koki
▴ 10
1
vote
2
replies
1.7k
views
Installing workflows with bioconductor v3.0
software error
workflows
updated 9.4 years ago by
Dan Tenenbaum
★ 8.2k • written 9.4 years ago by
tiffanie.moss
• 0
0
votes
2
replies
1.3k
views
Problem with Annotating Genomic Variant
workflows
vcf
8.9 years ago
merella.stefania
• 0
5
votes
1
reply
3.3k
views
News:
Bioconductor-related papers -- special F1000Research collection for Bioc2016
publication
workflows
benchmark
teaching
News
updated 8.1 years ago by
thomas.ingraham
▴ 10 • written 8.1 years ago by
Wolfgang Huber
★ 13k
0
votes
4
replies
1.8k
views
workflow.R in BioC 3.3
workflows
rnaseqgene
updated 7.9 years ago by
j.baldauf
• 0 • written 7.9 years ago by
yasmin.friedmann
• 0
1
vote
2
replies
2.8k
views
Tutorial for RNA-Seq Data Analysis
rnaseq
data analysis
tutorial
workflows
differential gene expression
updated 7.1 years ago by
Aaron Lun
★ 28k • written 7.1 years ago by
Pranavathiyani G
• 0
3
votes
2
replies
3.1k
views
Sparse matrices in Bioconductor objects for single-cell analyses
scater
simpleSingleCell
workflows
updated 6.9 years ago by
Aaron Lun
★ 28k • written 6.9 years ago by
sandmann.t
▴ 70
0
votes
1
reply
851
views
Unusual graph for Identifying HVGs from the normalized log-expression
workflows
simplesinglecell
updated 5.6 years ago by
Aaron Lun
★ 28k • written 5.6 years ago by
es.azadian
• 0
0
votes
1
reply
2.7k
views
workflowInstall is not working
workflowinstall
workflows
6.4 years ago
mckf11111
• 0
0
votes
1
reply
1.0k
views
Problem installing Bioc Workflows
rnaseq
workflows
bioconductor
7.9 years ago
Hadi Gharibi
• 0
6
votes
1
reply
3.9k
views
Tutorial:
Orchestrating a small, parallel, RNA-seq pre-processing workflow using R
rnaseq
biocparallel
workflows
sra
Tutorial
8.8 years ago
Sean Davis
21k
0
votes
0
replies
1.1k
views
News:
DEADLINE: All packages to pass R CMD build and R CMD check
release
software
experimentdata
workflows
News
6.0 years ago
shepherl
3.8k
0
votes
0
replies
1.6k
views
Job:
Services/Outreach orientend bioinformatics positions at EMBL - Heidelberg
EMBL
services
workflows
training
Job
9.2 years ago
Wolfgang Huber
★ 13k
3
votes
0
replies
2.2k
views
News:
BMC Source Code for Biology and Medicine: R/Bioconductor Workflows Section is calling for papers
workflows
publish
News
8.6 years ago
Levi Waldron
★ 1.1k
0
votes
0
replies
838
views
News:
Workflows now building on Bioc3.6
workflows
News
6.6 years ago
shepherl
3.8k
0
votes
0
replies
2.0k
views
Job:
Computational biologist / Bioinformatician – High-throughput screening
rnai
high-throughput screening
workflows
Job
8.8 years ago
e.schmidt
▴ 10
0
votes
1
reply
1.2k
views
help installing bioconductor workflows
workflows
biocinstaller
error
8.0 years ago
rocknrollscience
• 0
1
vote
2
replies
1.3k
views
Workflows in BioC 3.3
workflows
workflowinstall
3.3
8.0 years ago
Axel Klenk
★ 1.0k
21 results • Page
1 of 1
Recent ...
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Comment: Math expression in shapeCustom legend in EnhancedVolcano
by
pl23
• 0
Thank you very much - that worked perfectly! Word of warning to those who try this: it screws up the other legends because of the markdown …
Answer: PCA plot suggestions
by
Michael Love
41k
For help with interpretation and design of analysis, I recommend working with a local statistician. Due to time restrictions, I can only…
Comment: DESeq2 Error in `.rowNamesDF<-`(x, value = value): Invalid 'row.names' length
by
ussarizona
▴ 10
Hi Michael, Yes, I could figure it out what does the error mean. In my matrix I had the first colum GeneID while in my condition I only h…
Answer: Deseq2. decontXcounts not integers. Useful alternative?
by
Michael Love
41k
Another option would be to put the per sample estimated contamination in the design. This is for example how RUV etc help remove spurious D…
Answer: ATACseq merge peaks
by
ATpoint
★ 4.0k
That depends on your analysis. Typically, for differential analysis (and convenience) you would produce a single set of peaks (e.g. by merg…
Votes
Answer: Math expression in shapeCustom legend in EnhancedVolcano
Comment: DESeq2 Error in `.rowNamesDF<-`(x, value = value): Invalid 'row.names' length
Comment: Deseq2. decontXcounts not integers. Useful alternative?
Comment: Opposite sign of LFC in count plots of DEGs (DESeq2)
biomaRt error: database disk image is malformed
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