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0
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425
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News: Mass Spectrometry and Proteomics with R/Bioconductor course
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11 months ago info ▴ 10
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451
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Restricting differential binding analysis to only TSS-proximal regions
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updated 11 months ago by ★ 29k • written 11 months ago by • 0
0
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Batch Correction while implementing QSEA package
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11 months ago User3088 • 0
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11 months ago Maria Doyle ▴ 110
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building samplesheet and plot profile
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11 months ago yf • 0
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0
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11 months ago Manisha • 0
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445
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I am having issues with bowtie2_build
genomes bowtiew Index
updated 11 months ago by 68k • written 11 months ago by • 0
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1
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698
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DEG analysis across multiple timepoints, treatments and tissues
DifferentialExpression RNASeq DESeq2
updated 11 months ago by 43k • written 11 months ago by • 0
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382
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My DEXSeqDataSetFromSE is returning an Error, but all of my checks to seem to indicate that this error is not present
DifferentialSplicing RNASeqData DEXSeq
11 months ago cftattersfield • 0
1
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0
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11 months ago Maria Doyle ▴ 110
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2
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How to visualize these pathways using pathview
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11 months ago • updated 10 months ago ingrid.h • 0
2
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2
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updated 11 months ago by ★ 1.4k • written 11 months ago by • 0
9
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3
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4
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Why select top highly expressed genes based on normalized counts, but then plot VST-transformed values in DESeq2 pheatmap?
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11 months ago Quang NN ▴ 10
1
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3
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updated 11 months ago by • 0 • written 11 months ago by • 0
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9
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updated 11 months ago by ★ 3.4k • written 12 months ago by ▴ 20
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1
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649
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WGCNA sample-data preprocessing order
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updated 11 months ago by ★ 5.0k • written 11 months ago by • 0
0
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2
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WGCNA: Can we use high power (26) for signed network?
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11 months ago Vinesh • 0
0
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1
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Ph.D. scholar
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updated 11 months ago by ★ 5.0k • written 11 months ago by • 0
0
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1
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402
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Unable to find sample sheet file for ChAMP methylation data analysis
MethylationArray MethylationArrayData methylationArrayAnalysis
updated 11 months ago by 68k • written 11 months ago by • 0
0
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2
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How to generate circular cnetplot and color nodes and edges in the same plot ?
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11 months ago Blandine • 0
0
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5
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786
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Is there a way to do DEG analysis across two batches sharing one sample only?
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written 11 months ago by • 0
0
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1
reply
482
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affymetrix
genomes Annotation
updated 11 months ago by 68k • written 11 months ago by • 0
0
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1
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2.2k
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Problems with GSEA
GSEABase
updated 11 months ago by ★ 4.1k • written 11 months ago by • 0
0
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1
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550
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11 months ago ja.garcia • 0
0
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4
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11 months ago Quang NN ▴ 10
2
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4
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EdgeR Biological CVs
edgeR
written 11 months ago by • 0
0
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1
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541
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Curiously shaped volcano plot with using oarfish + swish to do differential gene expression on long-read RNA-seq
fishpond fish
updated 11 months ago by 43k • written 11 months ago by • 0
0
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0
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Problem with PCAtool as dependencie
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11 months ago Silvia • 0
1
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2
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485
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Detecting genomic signatures of drug resistance breast cancer in transcriptomic data
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0
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0
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327
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cnvEQTL : Error in cpm.default(y, lib.size = lib.size) : NA counts not allowed
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11 months ago xiaofeiwang18266 ▴ 60
3
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5
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Differential expression of protein coding ENSGs (Ensembl IDs) | When to biomaRt?
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updated 11 months ago by 68k • written 11 months ago by ▴ 10
0
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1
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426
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XCMS Data Processing
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2
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802
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updated 11 months ago by 68k • written 11 months ago by ▴ 60
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Problems with oarfish + tximport + swish
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updated 11 months ago by • 0 • written 11 months ago by • 0
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DESeq2 Heatmap
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updated 11 months ago by ★ 1.4k • written 11 months ago by • 0
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4
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Biomart and ensembl not working?
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updated 11 months ago by 68k • written 11 months ago by • 0
0
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1
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344
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Unknown gene transcripts after annotatr
annotatr
updated 11 months ago by 68k • written 11 months ago by • 0
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1
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357
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Improve performance of qusage aggregateGeneSet
qusage
updated 11 months ago by 68k • written 11 months ago by • 0
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0
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gsameth GSA: probe annotation to multiple genes
missMethyl gsameth
12 months ago • updated 11 months ago nurkenber • 0
0
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0
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403
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Testing Differential Expression with Interaction Effect Between Categorical and Continuous Variable with Repeated (Paired) Measures using variancePar…
limma variancePartition
12 months ago GJ • 0
0
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1
reply
432
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promoters_txdb <- promoters(txdb, upstream = 2000) is not 2000
TxDb.Hsapiens.UCSC.hg38.knownGene
updated 12 months ago by 68k • written 12 months ago by ▴ 20
0
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0
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556
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12 months ago info ▴ 10
0
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2
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written 12 months ago by ▴ 840
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iam not able to do retrive data using GEOquery R package
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2
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5
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Differential variability modelling with vst() expression
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written 12 months ago by • 0
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updated 12 months ago by ★ 5.0k • written 12 months ago by • 0
3
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updated 11 months ago by • 0 • written 12 months ago by • 0
0
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3
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DESeq2 analysis with transcript counts
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written 12 months ago by • 0
46,710 results • Page 10 of 935
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Itcapybara clicker is Slice Masternot o1v1 lolnlplanet clicker y level-devileasy to read bu Build Now GG|||| also make the conten more rich…
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[https://play-slice-master.com/][1][https://1v1-lol.cc/][2][https://planet-clicker.co/][3][https://play-level-devil.com/][4][https://buildn…
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Nope I don't mind haha! Anyway thanks so much! Thats super kind of you!
Answer: Combining two proteomics datasets with limpa by Gordon Smyth 53k
Hi Andrew, We don't have that much experience combining different datasets with limpa yet, but my feeling is that the same DPC should be u…
Comment: Guitar R package requires update due to dependency GenomicFeatures by ferran.llobet.cabau ▴ 10
Thank you @seandavi for your feedback. I followed your recommendations and generated a [pull request][1] including the fix for this issue…
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