Showing : Bioconductor • reset
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2
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1.1k
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Bioconductor API or dataset
Bioconductor Packages Dataset API
updated 3.0 years ago by 700 • written 3.0 years ago by • 0
2
votes
9
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2.3k
views
mas5calls function doesn't work; mirna40cdf problem
R Bioconductor mas5calls
updated 3.0 years ago by 68k • written 3.0 years ago by • 0
0
votes
1
reply
1.1k
views
msPurity::spectralMatching Error in getSmeta(con, pids) : No meta data for spectra available
msPurity Metabolomics Bioconductor xcms spectralMatching
updated 3.0 years ago by • 0 • written 3.3 years ago by ▴ 10
1
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1
reply
1.2k
views
News: Join the Community Advisory Board -- upcoming elections -- deadline Today
Bioconductor CAB bioconductoroversight community
written 3.1 years ago by 4.3k
0
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0
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965
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News: Seeking members for BioC2023 organizing committee
BioC2023 Bioconductor community
3.0 years ago Maria Doyle ▴ 110
0
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0
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1.0k
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News: Seeking Outreachy interns and project proposals
Bioconductor Outreachy community
3.0 years ago Maria Doyle ▴ 110
0
votes
2
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7.0k
views
Cannot install packages in R/BiocManager_Warning message: package(s) not installed when version(s) same as or greater than current; use `force = TR…
Bioconductor BioCManager ChIPseeker
updated 3.1 years ago by 68k • written 3.1 years ago by • 0
2
votes
2
replies
1.1k
views
Inccorect group number in DGEList
edgeR Bioconductor Dseq2 dgelist
updated 3.1 years ago by 53k • written 3.1 years ago by • 0
0
votes
1
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1.5k
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DeSeq2 and GenomicRange installation possible conflict with bioconductor version 3.16?
DESeq2 version3.16 installation bioconductor GenomicRange
updated 3.1 years ago by 68k • written 3.1 years ago by • 0
0
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2
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1.4k
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abs() error in rstudio
Bioconductor BiocManager abs() Bioinformatics
written 3.2 years ago by • 0
0
votes
3
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3.0k
views
Cannot download flowUtils package from Bioconductor 3.16
Bioconductor flowUtils
updated 3.2 years ago by ★ 6.6k • written 3.2 years ago by • 0
1
vote
7
replies
2.5k
views
query regarding error in installation of "goseq" R bioconductor package
R Bioconductor Install
updated 3.2 years ago by 4.3k • written 3.2 years ago by • 0
2
votes
8
replies
3.0k
views
error in getting entrez ids for gene names
Bioconductor
updated 3.2 years ago by 68k • written 3.2 years ago by • 0
3
votes
0
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1.6k
views
News: Save the Date Bioc2023!
Bioc2023 Conference Bioconductor
3.2 years ago shepherl 4.3k
0
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1
reply
1.1k
views
News: Bioconductor Scientific or Informatic Technology Advancement Award!
Recognition Awards Bioc2022 Bioconductor
written 3.8 years ago by 4.3k
5
votes
18
replies
9.9k
views
Install DESeq2 problem for macbook pro M1 Max
Bioconductor Install DESeq2
updated 2.1 years ago by • 0 • written 4.0 years ago by • 0
1
vote
0
replies
1.5k
views
News: Bioconductor 3.16 is Released!
Release Packages Bioconductor Software
3.3 years ago shepherl 4.3k
0
votes
0
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984
views
News: Last day to make commits before Release 3.16
Release Devel Bioconductor release devel
3.3 years ago shepherl 4.3k
0
votes
4
replies
1.5k
views
Error installing Bioc
clusterProfiler Bioconductor BiocManager
updated 3.3 years ago by ★ 4.1k • written 3.3 years ago by • 0
0
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2
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1.3k
views
News: List of Deprecated Packages for Bioc3.16
Release Deprecation Devel Bioconductor
3.3 years ago shepherl 4.3k
0
votes
4
replies
3.2k
views
how do i read a .seq file?
Bioconductor
3.3 years ago Luis • 0
1
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1
reply
3.6k
views
installation of BioC packages on Mac M1 Monterrey OS
limma Bioconductor edgeR
3.3 years ago Bogdan ▴ 670
0
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0
replies
1.2k
views
News: New Package Submission Deadline Tomorrow for Bioconductor 3.16
Release Devel Bioconductor Software
3.3 years ago shepherl 4.3k
2
votes
2
replies
3.5k
views
getSeq failing with DNAStringSet and GRanges
ORFik Bioconductor GenomicRanges Biostrings BSgenome
3.4 years ago • updated 3.3 years ago Mog • 0
1
vote
1
reply
1.2k
views
DESeq 2 failes to load
Bioconductor DESeq2
3.5 years ago Ruggero ▴ 10
0
votes
1
reply
1.4k
views
Problem related to `biomaRt::getBM()` during `R CMD check` execution
biomaRt Bioconductor
updated 3.5 years ago by 68k • written 3.5 years ago by • 0
0
votes
1
reply
1.4k
views
Attempt to install bioconductor 3.15, PCAtools
PCAtools bioconductor
updated 3.5 years ago by 68k • written 3.5 years ago by • 0
0
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1
reply
2.3k
views
Unable to access index for Bioconductor repository
Monterey macOS Bioconductor
updated 3.6 years ago by ▴ 90 • written 3.6 years ago by • 0
0
votes
1
reply
5.0k
views
Cannot Install WGCNA
Bioconductor
updated 3.6 years ago by 4.3k • written 3.6 years ago by • 0
0
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3
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4.7k
views
Can't Install ensembldb and EnsDb.Hsapiens.v86
installation EnsDb.Hsapiens.v86 Bioconductor package ensembldb
3.6 years ago elmfinds • 0
0
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1
reply
1.6k
views
Bioconducter can not be installed on latest RStudio
AnnotationDbi biomaRt Bioconductor
updated 3.6 years ago by ★ 6.6k • written 3.6 years ago by • 0
0
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2
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1.3k
views
R Bioconductor package Affxparser keeps crashing
affxparser r Bioconductor
updated 3.7 years ago by 68k • written 3.7 years ago by • 0
0
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0
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1.4k
views
Job: Bioconductor Community Manager
Community Teaching Bioconductor
3.7 years ago Matthew Ritchie ▴ 1000
0
votes
2
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1.2k
views
Package name already exists due to previous issue
Bioconductor
updated 3.7 years ago by 4.3k • written 3.7 years ago by • 0
3
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2
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2.3k
views
toGRanges help!
GenomicRanges toGRanges Bioconductor
3.7 years ago samantha.haque • 0
1
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2
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1.5k
views
News: Nominations for Bioconductor 2022 Awards!
Bioc2022 Awards Bioconductor Recognition
written 3.9 years ago by 4.3k
0
votes
0
replies
1.0k
views
News: Nominations for Bioconductor Technical Advisory Board is open
Board Organization Bioc2022 Bioconductor
3.7 years ago shepherl 4.3k
0
votes
0
replies
947
views
News: Junior Developer or New Package Developer Award
Recognition Awards Bioc2022 Bioconductor
3.8 years ago shepherl 4.3k
8
votes
0
replies
1.4k
views
News: Bioconductor 3.15 is Released!
Software Release Packages Bioconductor
3.8 years ago shepherl 4.3k
0
votes
0
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813
views
News: Search on bioconductor.org unavailable
Website bioconductor.org Bioconductor
3.8 years ago shepherl 4.3k
0
votes
3
replies
5.4k
views
Problem with gcc/fortran compilers in new version of Bioconductor (Mac M1)
biocmanager R gofortran Bioconductor
3.8 years ago Olivia • 0
2
votes
6
replies
2.8k
views
How to get around the warning message: mzR has been built against a different Rcpp version
mzR Bioconductor
updated 13 months ago by • 0 • written 3.8 years ago by • 0
0
votes
0
replies
969
views
News: Bioconductor Long-term Contribution Award
Recognition Awards Bioc2022 Bioconductor
3.8 years ago shepherl 4.3k
0
votes
4
replies
1.9k
views
News: List of Deprecated Packages for Bioc3.15
Devel Deprecation Release Bioconductor
3.9 years ago • updated 3.3 years ago shepherl 4.3k
0
votes
0
replies
903
views
News: Support Site Bioconductor Award
Recognition Awards Bioc2022 Bioconductor
3.8 years ago shepherl 4.3k
0
votes
0
replies
1.0k
views
News: Bioconductor Community Engagement, Outreach, and Diversity Award
Bioc2022 Awards Bioconductor Recognition
3.8 years ago shepherl 4.3k
0
votes
0
replies
1.1k
views
News: New Package Submission Deadline Tomorrow for Bioconductor 3.15
Release Software Bioconductor Devel
3.9 years ago shepherl 4.3k
0
votes
0
replies
1.0k
views
News: Bioconductor Award for Outstanding Documentation
Bioc2022 Awards Bioconductor Recognition
3.9 years ago shepherl 4.3k
0
votes
5
replies
2.9k
views
DESeqDataSetFromMatrix Function Error
DESeq2 Bioconductor
updated 3.9 years ago by 43k • written 3.9 years ago by • 0
1
vote
6
replies
5.9k
views
Bioconductor installation problems
packages installation Bioconductor updating
updated 3.9 years ago by 700 • written 3.9 years ago by ▴ 10
919 results • Page 5 of 19
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Comment: The Call for Abstracts for BioC2026 is open! by antoniodaniels990 • 0
All submitters must register for an account on the OpenReview submission system at least two weeks prior to the abstract deadline. To avoid…
Comment: using limma trend workflow in CAMERA by Gordon Smyth 53k
No, `trend.var=TRUE` and `trend=TRUE` are not needed in any voom pipeline, because the trend is already incorporated into the voom weights.
Comment: Questions about bacon QC and correction on EWAS results by Tikaaa2sahaaaq2c • 0
In the world of mobile games, the 88ef game download has gained traction for its performance driven design [free download][1], similar to …
Comment: using limma trend workflow in CAMERA by A.Barden ▴ 20
Do you need to set trend.var=TRUE when using camera in the limma-voom pipeline with RNA-Seq data (as apposed to limma-trend pipeline)?
Comment: Upcoming Ensembl API and data access changes - new blog post available by Tikaaa2sahaaaq2c • 0
Just as the Ensembl team transitions to a new platform for streamlined data access, diners can benefit from a digital newks menu prices con…
Votes
Answer: What happens to genes with low dispersion during dispersion shrinkage in DESeq2
Comment: Are transformed values from rlog /vst log2 normalized counts?
Answer: Are transformed values from rlog /vst log2 normalized counts?
A: DESeq2 normalization vs VST vs rlog
Answer: How to directly decet the outlier samples (libraries) in EdgeR pipeline
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