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7 months ago
fernanda.backsouza
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3
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805
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written 7.0 years ago by
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8
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15
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790
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4
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written 12 months ago by
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13 months ago
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I haven't used nf-core but, from browsing through their documentation, they didn't seem to have any pipeline for differential transcript ex…
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The poster needs to run Salmon with `--numGibbsSamples=50`. I suspect that nf-core just won't do that, so Salmon needs to be run directly.
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Probably nf-core did not run with bootstrap/gibbs replicates. Check the code. See salmon docs on how to turn that on.
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