Showing : FlowCore • reset
0
votes
0
replies
117
views
Macsquant FCS in read.FCS & opencyto
FlowCytometry flowWorkspace flowCore
7 weeks ago taylor.witte • 0
1
vote
1
reply
265
views
FCS3.2 reading
flowWorkspace flowCore CytoML
updated 6 weeks ago by ▴ 350 • written 11 weeks ago by ▴ 30
0
votes
0
replies
237
views
News: Online course - Flow cytometry data analysis with R/Bioconductor
flowDensity flowCore
4 months ago info ▴ 10
0
votes
6
replies
932
views
flowCore >2.0 read.FCS results in $SPILLOVER error when reading certain FCS files (could it be a warning?)
read.FCS flowCore
updated 4 months ago by ▴ 350 • written 5 months ago by • 0
1
vote
1
reply
390
views
How to read fcs3.2 files
flowCore
updated 5 months ago by 65k • written 5 months ago by ▴ 10
0
votes
2
replies
438
views
Cannot open Sysmex Partec CUbe 6 .fcs with read.FCS
Partec read.FCS flowCore
6 months ago mrescan • 0
0
votes
0
replies
391
views
Best method to manually add a cluster ID to a fcs or csv file
flowCore cytoMEM
9 months ago aguirre ▴ 20
0
votes
2
replies
512
views
Unable to access Git links.
Source flowCore Repository git
updated 12 months ago by 3.9k • written 12 months ago by • 0
0
votes
0
replies
362
views
Merging 2 staining panels
FlowCytometry flowCore
14 months ago michaela.gregorova13 • 0
0
votes
0
replies
498
views
write.FCS() produces files which cannot be opened by CytExpert software
flowCore
15 months ago pawel.malecki • 0
2
votes
1
reply
905
views
How to modify a compensation matrix in an fcs file
flowCore FlowCytometry
18 months ago aguirre ▴ 20
0
votes
0
replies
555
views
How to fix Flow-Data autoplot heat map
FlowCytometry flowCore openCyto ggcyto
18 months ago Dennis.hinkel • 0
2
votes
9
replies
1.5k
views
Error when plotting flow cytometry data
FlowCytometry flowCore ggcyto
updated 19 months ago by ▴ 350 • written 19 months ago by • 0
0
votes
0
replies
746
views
Error in the use of flowTrans: L-BFGS-B needs finite values of 'fn'
flowCore FlowCytometryData flowTrans flow
2.1 years ago hamiltond ▴ 10
0
votes
0
replies
918
views
FIXED: Using read.flowSet, getting a "no matching files found" error
flowCore FlowCytometryData
2.1 years ago hamiltond ▴ 10
0
votes
0
replies
722
views
Does flowCore::spillover() produce a spillover matrix or a compensation matrix?
flowCore
2.1 years ago nmchavez • 0
0
votes
0
replies
606
views
flowDensity Unable to find inherited method when given a flowFrame Object
flowCore flowDensity
2.1 years ago nmchavez • 0
0
votes
0
replies
557
views
Reducing/sampling number of FCS events
FlowCytometry flowCore
2.4 years ago markkelly1983 ▴ 20
2
votes
1
reply
873
views
Difference in output of logicle transform in different languages
flowCore
updated 2.1 years ago by • 0 • written 2.4 years ago by ▴ 20
0
votes
0
replies
700
views
Job: Bioconductor developer
FlowCytometry flowCore
2.4 years ago markkelly1983 ▴ 20
0
votes
1
reply
696
views
Error in flowCore::read.FCS(): Error in uint2double(splitted, endian == "big") : vector
read.FCS flowCore
2.5 years ago Rainer • 0
0
votes
1
reply
1.5k
views
how to get MFI stats from data
flowCore flowStats flowUtils flowWorkspace
updated 2.6 years ago by ★ 1.3k • written 3.0 years ago by • 0
0
votes
1
reply
868
views
Undefined columns error R cytometry analysis
flowCore ggcyto FlowCytometryData
updated 2.6 years ago by ★ 1.3k • written 3.0 years ago by • 0
0
votes
1
reply
1.2k
views
Re-naming $PnS parameters
flowCore
updated 3.2 years ago by ▴ 350 • written 3.2 years ago by • 0
2
votes
3
replies
1.0k
views
Getting number of datasets with flowCore
flowCore
updated 3.2 years ago by ▴ 350 • written 3.2 years ago by ▴ 10
1
vote
1
reply
1.4k
views
Error when using read.FCS
compensation flowCore FlowCore read.FCS
updated 3.3 years ago by ▴ 350 • written 3.3 years ago by • 0
0
votes
0
replies
665
views
flowCore - linear transformation
cytofWorkflow cytofworkflow flowCore
3.5 years ago GFM ▴ 20
1
vote
6
replies
1.4k
views
read.flowSet() raises " Argument 'phenoData' must be of type 'AnnotatedDataFrame'" error
flowCore
updated 3.5 years ago by ▴ 350 • written 3.5 years ago by • 0
0
votes
8
replies
1.7k
views
flowset/ncdfFlowset replace keywords doesn't work right
ncdfFlow flowCore
updated 7 months ago by • 0 • written 3.6 years ago by ▴ 30
3
votes
10
replies
2.4k
views
Reading multiple data segments from FCS 3.0 file
flowCore flow cytometry FCS 3.0 ncdfFlowSet
updated 24 months ago by ▴ 350 • written 4.0 years ago by ▴ 30
2
votes
2
replies
1.5k
views
Passing truncate_max_range=FALSE to read.ncdfFlowSet
ncdfFlow flowCore ncdfFlowSet read.FCS
updated 4.0 years ago by ▴ 310 • written 4.0 years ago by ▴ 30
4
votes
5
replies
1.1k
views
Calculate F measure to compare different gating approaches for a specific cell population
flowWorkspace flowCore openCyto flowFrame F-measure
updated 4.1 years ago by ▴ 310 • written 4.1 years ago by • 0
0
votes
1
reply
694
views
FlowCore openCyto: problem with summary(result)
flowCore openCyto Summary Result Filter
updated 4.0 years ago by ▴ 310 • written 4.1 years ago by • 0
0
votes
0
replies
586
views
Strange problem with parameter range when creating a flowFPModel
flowCore flowFP flowFPModel
4.2 years ago palffy.karoly • 0
0
votes
2
replies
929
views
flowCore not displaying FL gates
flowCore
updated 4.3 years ago by ★ 1.3k • written 4.3 years ago by • 0
2
votes
4
replies
1.1k
views
Mathematical operations in FCS file
flowCore flow cytometry
4.4 years ago chandra.swarnendu • 0
0
votes
1
reply
1.7k
views
Reproducing FlowJo Biexponential Transform in flowCore
flowCore
updated 4.5 years ago by ★ 1.3k • written 4.5 years ago by ▴ 10
1
vote
3
replies
1.2k
views
flowcore:::read.FCS does not read FCS3.1 correctly
flowcore
4.7 years ago cahyasu88 • 0
1
vote
0
replies
864
views
Cell cycle analysis subG1
flowploidy apoptosis cell cycle flowCore
4.8 years ago nina.hahn • 0
3
votes
2
replies
1.0k
views
flowWorkspace cannot load external data
flowWorkspace external data flowCore
4.8 years ago Brent.OCarrigan • 0
1
vote
2
replies
1.8k
views
flowCore issue: creating and applying new compensation matrix
compensate() flowCore
4.8 years ago rdlr • 0
0
votes
1
reply
749
views
Issue creating transformed filter in flowCore
flowCore
updated 4.9 years ago by ▴ 310 • written 4.9 years ago by • 0
4
votes
4
replies
1.3k
views
FCSTransTransform() implementation in flowCore
flowCore FCSTrans flow cytometry
updated 4.9 years ago by ▴ 310 • written 4.9 years ago by ▴ 80
3
votes
1
reply
2.0k
views
Convert Flowframe to matrix
flowcore fcs flow cytommetry matrix conversion
updated 4.9 years ago by ▴ 310 • written 4.9 years ago by • 0
2
votes
3
replies
1.7k
views
how to use the flowCore spillover function
flowCore spillover gatingset2FlowJO
updated 4.9 years ago by ▴ 310 • written 4.9 years ago by • 0
1
vote
4
replies
1.6k
views
flowCore install missing a dependency?
flowCore Installation dependency
updated 5.0 years ago by ▴ 310 • written 5.0 years ago by ▴ 70
0
votes
0
replies
739
views
flowPloidy: how to visualize data on logarythmic x axis
flowPloidy flowcore flow cytometry
5.1 years ago kovacik • 0
1
vote
5
replies
1.7k
views
Flow cytometry optimization of transformation parameters
flow Cytometry flowCore flowTrans
5.2 years ago carlos.x.martinez-fleites • 0
1
vote
6
replies
2.3k
views
flowCore: uneven number of tokens / The last keyword is dropped.
flowCore
updated 5.2 years ago by ▴ 350 • written 5.2 years ago by • 0
1
vote
2
replies
969
views
gatingML examples needed
flowCore flowUtils gatingML
updated 5.2 years ago by ★ 1.3k • written 5.2 years ago by ▴ 10
50 results • Page 1 of 1
Recent ...
Replies
Comment: deseq2 results by swbarnes2 ★ 1.4k
Ask the people who made the libraires if there was anything unusual in the QC of the outlier sample. Try to figure out what biologically …
Comment: Can't post a question containing code? by NATASHA • 0
did you find a solution? I´m having the same problem
Comment: error by NATASHA • 0
Please ignore, i didnt copy all the scrip
Comment: Extremely small p-values using Limma for proteomic data by James W. MacDonald 65k
If you ever find yourself using the `@` function, you should reconsider what you are doing. There are vanishingly small instances when an e…
Comment: How to use bootRanges to bootstrap small RNA loci (nullranges package) by Michael Love 42k
Here is some example code <https://gist.github.com/mikelove/cbbc84634b6854c865cb5eb08ad9b245>
Votes
A: AIC-like measure for DESeq2
Comment: Extremely small p-values using Limma for proteomic data
Comment: Log-cpm values from limma
Comment: Log-cpm values from limma
Comment: deseq2 results
Awards • All
Popular Question to maria.soler • 0
Popular Question to Pietro ▴ 40
Popular Question to neilzhao ▴ 30
Popular Question to ATpoint ★ 4.1k
Teacher to Michael Love 42k
Locations • All
France, 10 minutes ago
UPF, Barcelona, Spain, 1 hour ago
Canada, 2 hours ago
WEHI, Melbourne, Australia, 2 hours ago
San Diego, 3 hours ago
Traffic: 622 users visited in the last hour
Content Search
Users
Tags
Badges
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6