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Shiny
•
reset
0
votes
0
replies
580
views
Displaying large image stacks (e.g. from multiplexed immunohistochemistry) using shiny and EBImage
shiny
EBImage
23 months ago
Wolfgang Huber
★ 13k
0
votes
1
reply
841
views
Error in ChAMP GUI
ChAMP
shiny
ChAMPdata
updated 2.2 years ago by
anna.stanislawska
• 0 • written 2.3 years ago by
Mari
• 0
0
votes
0
replies
793
views
Export Results from BatchQC Shiny App
BatchQC
RNA-seq
R
Shiny
batch-effect
4.2 years ago
manninm
• 0
0
votes
1
reply
966
views
AnnotationHub display() gives JavaScript Alert and DataTables warning
AnnotationHub
Shiny
Rstudio
updated 4.3 years ago by
shepherl
3.9k • written 4.3 years ago by
bwiley4
• 0
6
votes
0
replies
1.3k
views
News:
Winners of the 1st Shiny Contest: iSEE
iSEE
shiny
summarizedExperiment
News
5.2 years ago
Aaron Lun
★ 28k
0
votes
7
replies
1.5k
views
Problems with DESeq2 'design' parameter using Shiny/rhandsontable
deseq2
shiny
design
rhandsontable
hot_to_r()
updated 5.3 years ago by
Michael Love
42k • written 5.3 years ago by
hinkel2
• 0
0
votes
1
reply
1.9k
views
DEBrowser shiny - Maximum upload size exceeded - error
DEBrowser
shiny
5.4 years ago
tomasfly
• 0
0
votes
3
replies
1.4k
views
browseGenome with Shiny
rtracklayer
browsegenome
shiny
updated 5.7 years ago by
Michael Lawrence
★ 11k • written 5.7 years ago by
vivek82
• 0
12
votes
3
replies
6.1k
views
Error while uploading Bioconductor packages - R Shiny
shiny
package
deploy
6.2 years ago
lloyd.izard
▴ 80
3
votes
3
replies
1.4k
views
Sharing SC3_interactive results
SC3
single-cell
shiny
updated 7.1 years ago by
Vladimir Kiselev
▴ 150 • written 7.1 years ago by
cfustero
▴ 20
0
votes
1
reply
1.7k
views
News:
Plotly uprading issue in ChAMP package
ChAMP
Epigenetics
plotly
Shiny
GUI
News
7.6 years ago • updated 7.4 years ago
Yuan Tian
▴ 90
0
votes
1
reply
1.2k
views
R packages developed using shiny
shiny
updated 7.6 years ago by
Martin Morgan
25k • written 7.6 years ago by
bhakti.dwivedi
• 0
1
vote
1
reply
1.3k
views
reactive CellCODE heatmap
cellcode
shiny
heatmap
updated 8.1 years ago by
Andrzej Oleś
▴ 750 • written 8.1 years ago by
christopher.clarskon15
▴ 20
0
votes
1
reply
1.6k
views
shiny account on mac not deploying server
limmagui
shiny
8.2 years ago
christopher.clarskon15
▴ 20
7
votes
0
replies
3.7k
views
Tutorial:
New edX "Data analysis for Life Sciences" module: High performance computing for reproducible genomics
annotation
genomicranges
visualization
docker
shiny
Tutorial
8.3 years ago
Vincent J. Carey, Jr.
6.7k
0
votes
0
replies
1.8k
views
Shiny - error messages with validate
R
validate
shiny
8.7 years ago
alptaciroglu
▴ 50
1
vote
7
replies
2.8k
views
Shiny app for RefNet, PSICQUIC: annotated protein/protein interactions
shiny
network
interactions
9.6 years ago
pshannon
▴ 100
17 results • Page
1 of 1
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Replies
Answer: Trouble reading samplesheet in with diffbind to create dba
by
Anthony
• 0
I was struggling with this today too. For me it happened because my peak files were not in the correct format. The "10 elements" refers to …
Comment: gds in GEOmetadb 2023-06-26 version is empty
by
Frederico Moraes Ferreira
▴ 100
Try axel -n 20 https://gbnci.cancer.gov/geo/GEOmetadb.sqlite.gz
Comment: Most enriched pathway is not expressed when modifying universe parameter
by
James W. MacDonald
66k
The default for `enrichGO` is to subset to those with a p-value<0.05. You don't adjust that default argument, so you shouldn't have any GO …
Answer: In a 3 group DEG analysis with three batches, can I use 1 group in all three bat
by
Michael Love
42k
You can compare A and C thanks to the sharing of samples from B across 1, 2 and 3.
Comment: Most enriched pathway is not expressed when modifying universe parameter
by
adripel
• 0
In the enrichGO results we have significant and non-significant enriched terms that are displayed. So why would an enriched term (significa…
Votes
Answer: How to do DESeq2 on Kallisto Data
Comment: Most enriched pathway is not expressed when modifying universe parameter
Time-course, comparison of two groups
Answer: Behaviour of featureCounts when quantifying multi-mapping reads
Answer: GESA with certain gene list returns no result with human genom, but many result
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