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Shiny
•
reset
0
votes
0
replies
756
views
Displaying large image stacks (e.g. from multiplexed immunohistochemistry) using shiny and EBImage
shiny
EBImage
2.6 years ago
Wolfgang Huber
★ 13k
0
votes
1
reply
1.1k
views
Error in ChAMP GUI
ChAMP
shiny
ChAMPdata
updated 2.9 years ago by
anna.stanislawska
• 0 • written 2.9 years ago by
Mari
• 0
0
votes
0
replies
974
views
Export Results from BatchQC Shiny App
BatchQC
RNA-seq
R
Shiny
batch-effect
4.8 years ago
manninm
• 0
0
votes
1
reply
1.2k
views
AnnotationHub display() gives JavaScript Alert and DataTables warning
AnnotationHub
Shiny
Rstudio
updated 5.0 years ago by
shepherl
4.1k • written 5.0 years ago by
bwiley4
• 0
6
votes
0
replies
1.5k
views
News:
Winners of the 1st Shiny Contest: iSEE
iSEE
shiny
summarizedExperiment
News
5.9 years ago
Aaron Lun
★ 28k
0
votes
7
replies
1.8k
views
Problems with DESeq2 'design' parameter using Shiny/rhandsontable
deseq2
shiny
design
rhandsontable
hot_to_r()
updated 6.0 years ago by
Michael Love
43k • written 6.0 years ago by
hinkel2
• 0
0
votes
1
reply
2.2k
views
DEBrowser shiny - Maximum upload size exceeded - error
DEBrowser
shiny
6.1 years ago
tomasfly
• 0
0
votes
3
replies
1.7k
views
browseGenome with Shiny
rtracklayer
browsegenome
shiny
updated 6.3 years ago by
Michael Lawrence
★ 11k • written 6.3 years ago by
vivek82
• 0
12
votes
3
replies
6.5k
views
Error while uploading Bioconductor packages - R Shiny
shiny
package
deploy
6.9 years ago
lloyd.izard
▴ 80
3
votes
3
replies
1.6k
views
Sharing SC3_interactive results
SC3
single-cell
shiny
updated 7.8 years ago by
Vladimir Kiselev
▴ 150 • written 7.8 years ago by
cfustero
▴ 20
0
votes
1
reply
1.9k
views
News:
Plotly uprading issue in ChAMP package
ChAMP
Epigenetics
plotly
Shiny
GUI
News
8.3 years ago • updated 8.1 years ago
Yuan Tian
▴ 90
0
votes
1
reply
1.4k
views
R packages developed using shiny
shiny
updated 8.3 years ago by
Martin Morgan
25k • written 8.3 years ago by
bhakti.dwivedi
• 0
1
vote
1
reply
1.5k
views
reactive CellCODE heatmap
cellcode
shiny
heatmap
updated 8.8 years ago by
Andrzej Oleś
▴ 750 • written 8.8 years ago by
christopher.clarskon15
▴ 20
0
votes
1
reply
1.8k
views
shiny account on mac not deploying server
limmagui
shiny
8.9 years ago
christopher.clarskon15
▴ 20
7
votes
0
replies
4.1k
views
Tutorial:
New edX "Data analysis for Life Sciences" module: High performance computing for reproducible genomics
annotation
genomicranges
visualization
docker
shiny
Tutorial
8.9 years ago
Vincent J. Carey, Jr.
6.7k
0
votes
0
replies
2.0k
views
Shiny - error messages with validate
R
validate
shiny
9.3 years ago
alptaciroglu
▴ 50
1
vote
7
replies
3.0k
views
Shiny app for RefNet, PSICQUIC: annotated protein/protein interactions
shiny
network
interactions
10.3 years ago
pshannon
▴ 100
17 results • Page
1 of 1
Recent ...
Replies
Comment: Overcoming confounding in batch effect correction
by
ATpoint
★ 4.7k
biostars.org and the [bioinformatics reddit][1] are suitable and have much larger audience than this forum here. [1]: https://www.reddi…
Comment: Overcoming confounding in batch effect correction
by
bbao
▴ 10
Thank you! And apologies for posting here. Do you know which forum I should go to in the future for questions like these?
Comment: For some reason I can't update BiocManager to 3.20
by
shepherl
4.1k
interesting. it could be since this is not your installation that it was installed by an admin that you do not have access to perform this…
Comment: Overcoming confounding in batch effect correction
by
ATpoint
★ 4.7k
Hi, this is not related to Bioconductor directly. And no, you cannot correct anything because in your own batch you only have a single samp…
Comment: MEDIPS - error using MEDIPS.CpGenrich
by
sg
• 0
I have the same error when I use 22 chrs with the paramenters chr.select: Error in h(simpleError(msg, call)) : error in evaluating the …
Votes
Answer: enrichGOgradient color change
Comment: Overcoming confounding in batch effect correction
Overcoming confounding in batch effect correction
Answer: Standardization of rlog transformed counts before PCA
Answer: Standardization of rlog transformed counts before PCA
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