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Shiny
•
reset
0
votes
0
replies
748
views
Displaying large image stacks (e.g. from multiplexed immunohistochemistry) using shiny and EBImage
shiny
EBImage
2.5 years ago
Wolfgang Huber
★ 13k
0
votes
1
reply
1.1k
views
Error in ChAMP GUI
ChAMP
shiny
ChAMPdata
updated 2.9 years ago by
anna.stanislawska
• 0 • written 2.9 years ago by
Mari
• 0
0
votes
0
replies
970
views
Export Results from BatchQC Shiny App
BatchQC
RNA-seq
R
Shiny
batch-effect
4.8 years ago
manninm
• 0
0
votes
1
reply
1.2k
views
AnnotationHub display() gives JavaScript Alert and DataTables warning
AnnotationHub
Shiny
Rstudio
updated 4.9 years ago by
shepherl
4.1k • written 4.9 years ago by
bwiley4
• 0
6
votes
0
replies
1.5k
views
News:
Winners of the 1st Shiny Contest: iSEE
iSEE
shiny
summarizedExperiment
News
5.8 years ago
Aaron Lun
★ 28k
0
votes
7
replies
1.8k
views
Problems with DESeq2 'design' parameter using Shiny/rhandsontable
deseq2
shiny
design
rhandsontable
hot_to_r()
updated 5.9 years ago by
Michael Love
43k • written 5.9 years ago by
hinkel2
• 0
0
votes
1
reply
2.2k
views
DEBrowser shiny - Maximum upload size exceeded - error
DEBrowser
shiny
6.1 years ago
tomasfly
• 0
0
votes
3
replies
1.7k
views
browseGenome with Shiny
rtracklayer
browsegenome
shiny
updated 6.3 years ago by
Michael Lawrence
★ 11k • written 6.3 years ago by
vivek82
• 0
12
votes
3
replies
6.5k
views
Error while uploading Bioconductor packages - R Shiny
shiny
package
deploy
6.9 years ago
lloyd.izard
▴ 80
3
votes
3
replies
1.6k
views
Sharing SC3_interactive results
SC3
single-cell
shiny
updated 7.7 years ago by
Vladimir Kiselev
▴ 150 • written 7.7 years ago by
cfustero
▴ 20
0
votes
1
reply
1.9k
views
News:
Plotly uprading issue in ChAMP package
ChAMP
Epigenetics
plotly
Shiny
GUI
News
8.3 years ago • updated 8.1 years ago
Yuan Tian
▴ 90
0
votes
1
reply
1.4k
views
R packages developed using shiny
shiny
updated 8.2 years ago by
Martin Morgan
25k • written 8.2 years ago by
bhakti.dwivedi
• 0
1
vote
1
reply
1.5k
views
reactive CellCODE heatmap
cellcode
shiny
heatmap
updated 8.8 years ago by
Andrzej Oleś
▴ 750 • written 8.8 years ago by
christopher.clarskon15
▴ 20
0
votes
1
reply
1.8k
views
shiny account on mac not deploying server
limmagui
shiny
8.8 years ago
christopher.clarskon15
▴ 20
7
votes
0
replies
4.0k
views
Tutorial:
New edX "Data analysis for Life Sciences" module: High performance computing for reproducible genomics
annotation
genomicranges
visualization
docker
shiny
Tutorial
8.9 years ago
Vincent J. Carey, Jr.
6.7k
0
votes
0
replies
2.0k
views
Shiny - error messages with validate
R
validate
shiny
9.3 years ago
alptaciroglu
▴ 50
1
vote
7
replies
3.0k
views
Shiny app for RefNet, PSICQUIC: annotated protein/protein interactions
shiny
network
interactions
10.3 years ago
pshannon
▴ 100
17 results • Page
1 of 1
Recent ...
Replies
Answer: How to compare expression levels of genes between scRNAseq and bulkRNAseq?
by
jodan
• 0
Your approach sounds solid! You might also consider plotting a scatter plot comparing log2 fold changes from both datasets to identify gene…
Answer: Unused arguments error without used arguments in GSVA?
by
jodan
• 0
It looks like the ssgseaParam function might not be passing the correct parameters to GSVA::gsva(). The error suggests that minSize and max…
Answer: Using genomicRanges / plyranges to calculate score of peaks within intervals
by
Michael Love
43k
This should be possible with plyranges using `join_overlap` and `group_by` on the metadata from the tile. E.g. create `tile.id` as a variab…
Answer: Reducing and aggregating GRanges with gaps using plyranges
by
Michael Love
43k
I added `min.gapwidth` to `reduce_ranges()` in recent plyranges releases: https://github.com/tidyomics/plyranges/pull/105
Answer: Find exact GRanges match keeping metadata columns
by
Michael Love
43k
You could use `minoverlap` but that requires an integer, not a fraction: ``` gr1 |> join_overlap_left(gr2, minoverlap=6) ``` Plyranges do…
Votes
Answer: Unused arguments error without used arguments in GSVA?
Answer: Unused arguments error without used arguments in GSVA?
Answer: Unused arguments error without used arguments in GSVA?
Unused arguments error without used arguments in GSVA?
Answer: Is it always preferable to recount library sizes of DGEList object in edgeR afte
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Teacher
to
Axel Klenk
★ 1.1k
Popular Question
to
shepherl
4.1k
Popular Question
to
Gordon Smyth
52k
Popular Question
to
bastien_chassagnol
• 0
Popular Question
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Maria Doyle
▴ 100
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