Bioconductor Design and contrast matrix

12

votes

20

replies

2.0k

views

limma multifactorial design design and contrast matrix affymetrix microarrays

updated 8.7 years ago by Aaron Lun ★ 28k • written 8.7 years ago by svlachavas ▴ 830

3

votes

16

replies

4.1k

views

limma contrast design and contrast matrix

9.5 years ago Smith H. ▴ 20

1

vote

12

replies

1.4k

views

edgeR design and contrast matrix

updated 7.7 years ago by Aaron Lun ★ 28k • written 7.7 years ago by Jane Merlevede ▴ 90

8

votes

9

replies

4.4k

views

deseq2 heterosis contrast design and contrast matrix

updated 8.9 years ago by Michael Love 42k • written 8.9 years ago by johntlovell ▴ 10

10

votes

9

replies

3.9k

views

edger design and contrast matrix multiple factor design multiple comparisons

updated 8.9 years ago by James W. MacDonald 65k • written 8.9 years ago by mouchkam ▴ 20

1

vote

8

replies

1.6k

views

deseq2 design and contrast matrix

updated 8.0 years ago by Michael Love 42k • written 8.0 years ago by Nitesh Kumar Singh ▴ 30

1

vote

8

replies

2.1k

views

deseq2 DESeq design and contrast matrix deseq

6.2 years ago • updated 6.1 years ago SPbeginner • 0

4

votes

8

replies

1.9k

views

edger glmlrt() differential expression design and contrast matrix

updated 8.9 years ago by Gordon Smyth 50k • written 8.9 years ago by carlgdeboer • 0

4

votes

8

replies

6.8k

views

deseq2 design and contrast matrix

updated 6.8 years ago by Peter Langfelder ★ 3.0k • written 6.8 years ago by pokharel.kisun • 0

6

votes

7

replies

2.1k

views

limma design and contrast matrix differential gene expression regression

updated 6.8 years ago by Aaron Lun ★ 28k • written 6.8 years ago by Luca • 0

9

votes

7

replies

5.2k

views

limma spline design and contrast matrix covariate

updated 8.7 years ago by Aaron Lun ★ 28k • written 8.7 years ago by Hilary ▴ 30

2

votes

6

replies

1.8k

views

deseq2 multiple factor design interactions design and contrast matrix contrast

updated 8.0 years ago by Michael Love 42k • written 8.0 years ago by piensaglobalmente ▴ 10

2

votes

6

replies

1.4k

views

limma design and contrast matrix

8.6 years ago John ▴ 10

3

votes

6

replies

1.4k

views

microarray limma design and contrast matrix

updated 6.1 years ago by Gordon Smyth 50k • written 6.1 years ago by 1234anjalianjali1234 ▴ 30

2

votes

6

replies

2.5k

views

limma deseq2 normalization degenes design and contrast matrix

written 6.8 years ago by mrigaya.mehra ▴ 10

1

vote

6

replies

6.0k

views

deseq2 design and contrast matrix

9.4 years ago newmanss • 0

0

votes

6

replies

1.8k

views

model.matrix multiple factor design design and contrast matrix deseq2

updated 8.7 years ago by Michael Love 42k • written 8.7 years ago by newmanss • 0

3

votes

6

replies

27k

views

deseq2 design and contrast matrix model matrix

7.2 years ago mrigaya.mehra ▴ 10

2

votes

6

replies

1.4k

views

r edger de contrast design and contrast matrix

updated 7.9 years ago by Aaron Lun ★ 28k • written 7.9 years ago by nooshin ▴ 300

3

votes

6

replies

1.7k

views

limma design and contrast matrix design matrix limma design matrix

updated 8.9 years ago by James W. MacDonald 65k • written 8.9 years ago by Moritz E. Beber ▴ 10

3

votes

5

replies

1.8k

views

limma block design and contrast matrix

8.9 years ago choofd • 0

5

votes

5

replies

9.2k

views

limma design and contrast matrix

updated 8.8 years ago by Aaron Lun ★ 28k • written 8.8 years ago by xyliu00 ▴ 20

5

votes

5

replies

1.4k

views

limma design and contrast matrix design matrix contrast matrix

updated 5.6 years ago by James W. MacDonald 65k • written 5.6 years ago by mikhael.manurung ▴ 270

1

vote

5

replies

2.0k

views

limma paired design and contrast matrix

9.5 years ago wim.trypsteen • 0

2

votes

5

replies

1.5k

views

deseq2 results design and contrast matrix

updated 6.5 years ago by Michael Love 42k • written 7.1 years ago by tarun2 • 0

0

votes

5

replies

3.3k

views

deseq2 timecourse time course design and contrast matrix coefficient of variation

updated 8.5 years ago by Michael Love 42k • written 8.5 years ago by Assa Yeroslaviz ★ 1.5k

9

votes

4

replies

6.3k

views

microarray limma design and contrast matrix

7.1 years ago Anna ▴ 50

3

votes

4

replies

3.0k

views

edger design and contrast matrix rnaseq

updated 9.5 years ago by Aaron Lun ★ 28k • written 9.5 years ago by Marco ▴ 20

3

votes

4

replies

1.3k

views

limma design and contrast matrix limma design matrix

updated 8.6 years ago by Aaron Lun ★ 28k • written 8.6 years ago by akridgerunner ▴ 30

7

votes

4

replies

2.9k

views

limma deseq2 design and contrast matrix

updated 6.8 years ago by alexis.maizel • 0 • written 8.5 years ago by Jake ▴ 90

4

votes

4

replies

1.5k

views

differential gene expression limma rnaseq design and contrast matrix limma voom

8.3 years ago stuart ▴ 10

2

votes

4

replies

5.4k

views

deseq2 interactions design and contrast matrix contrast

8.1 years ago dwzhang.wisc ▴ 20

4

votes

4

replies

2.7k

views

bioconductor edgeR design and contrast matrix rnaseq differential gene expression

updated 7.7 years ago by Aaron Lun ★ 28k • written 7.7 years ago by lidixu.se • 0

3

votes

4

replies

2.1k

views

deseq2 multiple factor design design and contrast matrix design multifactorial design

7.6 years ago shimbalama • 0

3

votes

4

replies

1.5k

views

limma multiple factor design NA values design and contrast matrix

updated 7.2 years ago by Gordon Smyth 50k • written 7.2 years ago by svlachavas ▴ 830

0

votes

4

replies

2.4k

views

design and contrast matrix

updated 6.3 years ago by Gordon Smyth 50k • written 6.3 years ago by prathap1708 • 0

1

vote

4

replies

1.4k

views

deseq2 design and contrast matrix

updated 6.0 years ago by Michael Love 42k • written 6.0 years ago by chitsazanalex ▴ 10

4

votes

4

replies

8.1k

views

edger design and contrast matrix contrast limma contrast matrix limma

updated 6.3 years ago by Gordon Smyth 50k • written 6.3 years ago by cafelumiere12 ▴ 20

0

votes

4

replies

1.6k

views

edgeR design and contrast matrix design matrix

updated 6.1 years ago by Gordon Smyth 50k • written 6.1 years ago by cafelumiere12 ▴ 20

3

votes

4

replies

1.2k

views

edger design and contrast matrix

updated 6.0 years ago by Aaron Lun ★ 28k • written 6.0 years ago by mart1139 • 0

2

votes

4

replies

2.1k

views

edger rnaseq design and contrast matrix

updated 4.3 years ago by Gordon Smyth 50k • written 4.3 years ago by rebecca.lea.johnston • 0

0

votes

3

replies

2.0k

views

minfi bumphunter design and contrast matrix paired samples limma

8.3 years ago david.watson ▴ 30

6

votes

3

replies

5.5k

views

limma design matrix design and contrast matrix continuous interactions

updated 8.6 years ago by Aaron Lun ★ 28k • written 8.6 years ago by jaison75 ▴ 20

4

votes

3

replies

3.3k

views

limma multifactorial design design and contrast matrix limma design matrix limma contrast matrix

updated 8.1 years ago by Gordon Smyth 50k • written 8.1 years ago by ckeeling • 0

3

votes

3

replies

1.1k

views

rnaseq edger design and contrast matrix

7.6 years ago jjh • 0

4

votes

3

replies

1.4k

views

edgeR design and contrast matrix

updated 6.7 years ago by Aaron Lun ★ 28k • written 6.7 years ago by b.nota ▴ 360

1

vote

3

replies

1.1k

views

bioconductor affymetrix microarrays differential gene expression design and contrast matrix

updated 6.8 years ago by Aaron Lun ★ 28k • written 6.9 years ago by raju.prasad.phe12 • 0

2

votes

3

replies

2.2k

views

edger design and contrast matrix

updated 9.4 years ago by Gordon Smyth 50k • written 9.4 years ago by Son Pham ▴ 60

13

votes

3

replies

12k

views

limma design and contrast matrix

updated 8.6 years ago by Aaron Lun ★ 28k • written 8.6 years ago by Andy91 ▴ 60

1

vote

2

replies

1.7k

views

limma affy probe qualitycontrol design and contrast matrix

updated 9.3 years ago by Gordon Smyth 50k • written 9.3 years ago by alakatos ▴ 130