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developers bioc-devel

7.2 years ago Casper van Mourik • 0

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developers bioc-devel package development circular dependencies

updated 7.3 years ago by shepherl 4.3k • written 7.3 years ago by Tim Triche ★ 4.2k

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bioconductor developers bioc-devel News

7.8 years ago Alejandro Reyes ★ 1.9k

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git github developers

updated 8.0 years ago by nitesh.turaga ▴ 140 • written 8.0 years ago by wirth • 0

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github package updates developers package development

8.3 years ago rtraborn • 0

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flowDensity developers

updated 8.5 years ago by Martin Morgan 25k • written 8.5 years ago by mmalek • 0

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github vignette test developers

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updated 10.2 years ago by Martin Morgan 25k • written 10.2 years ago by MarcinKosiński • 0

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software bioc-devel developers R

updated 10.2 years ago by Dan Tenenbaum ★ 8.2k • written 10.2 years ago by MarcinKosiński • 0

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developers conference workshop News

updated 10.2 years ago by Laurent Gatto 1.6k • written 10.4 years ago by Mark Dunning ★ 1.1k

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bioconductor devel developers

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package bioconductor bioc-devel developers

10.7 years ago flying-sheep ▴ 10

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developers workshop conference meeting News

11.3 years ago Wolfgang Huber ★ 13k

14 results • Page 1 of 1

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Comment: DESeq2 - how many surrogate variables from svaseq, use of lfcshrink by ja569116 • 0

Hi @atpoint Thanks for the information. Could you please expand on when to use adjusted p-values vs nominal p-values. My understanding was …

Answer: limpa analysis advice by Gordon Smyth 53k

It is actually very hard to estimate the DPC from observed data, because the curve is function of unobserved intensities rather than a func…

Answer: When to use edgeR or limma by Gordon Smyth 53k

The short answer is that we generally prefer edgeR for applications with lots of small counts and limma for complex designs with random eff…

Comment: limpa-blank normalization and Spectronaut's PTM stoichiometry by Gordon Smyth 53k

I updated the above answer today.

Answer: When to use edgeR or limma by James W. MacDonald 68k

I would use edgeR's quasi-likelihood model for any analysis with a smaller number of observations (like 3 vs 3 or similar), but if you have…

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Answer: When to use edgeR or limma

A: deseq2 - paired samples in 2 sequencing types with very different library sizes

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Popular Question to Lluís Revilla Sancho ▴ 760