Bioconductor Igraph

Showing : igraph • reset

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2.0k

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igraph networkanalysis Phylogenetics phyloseq

updated 10 weeks ago by Stefano Mangiola ▴ 40 • written 5.1 years ago by Chantel • 0

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915

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igraph KEGGgraph RCy3 GraphNEL

16 months ago • updated 15 months ago Arindam ▴ 80

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1.1k

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GRanges igraph

updated 3.0 years ago by Lluís Revilla Sancho ▴ 760 • written 3.0 years ago by Bogdan ▴ 670

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830

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WGCNA igraph

3.2 years ago María José • 0

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3.8k

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R 3.6.2 update problems with igraph and phangorn update Phyloseq igraph phangorn Tutorial

updated 6.1 years ago by Martin Morgan 25k • written 6.1 years ago by crgarcia • 0

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2.3k

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igraph network gene corexpression rna-seq

updated 4.5 years ago by Gordon Smyth 53k • written 6.8 years ago by aiswaryabioinfo • 0

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2.2k

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STRINGdb igraph

6.8 years ago Samuel Lee • 0

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2.7k

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scater scran igraph scRNA-Seq rots

updated 6.9 years ago by Aaron Lun ★ 29k • written 6.9 years ago by hamza_karakurt ▴ 60

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1.4k

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igraph miR2Pathway Pathway page_rank

updated 7.8 years ago by Martin Morgan 25k • written 7.8 years ago by genomic8328 ▴ 10

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1.4k

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graph pathways igraph

7.9 years ago genomic8328 ▴ 10

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4.2k

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igraph

8.3 years ago Andrew Box ▴ 10

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1.8k

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QuACN igraph

8.5 years ago lljotall ▴ 10

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2.5k

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igraph spade

updated 8.7 years ago by johnheath346 • 0 • written 10.1 years ago by duncanjamesmurray01 • 0

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2.0k

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installation package installation topaseq igraph LD_LIBRARY_PATH

9.0 years ago jan.soderman • 0

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1.4k

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ppi network analysis igraph

9.7 years ago Abhishek Pratap ▴ 190

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1.7k

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igraph software error adjacency matrix

updated 9.7 years ago by Paul Shannon ▴ 470 • written 9.7 years ago by Angel ▴ 40

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1.4k

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RamiGO R gene ontology igraph

10.0 years ago bkellman • 0

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3.4k

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igraph

updated 10.1 years ago by Hervé Pagès 16k • written 10.1 years ago by Angel ▴ 40

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2.4k

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FEM igraph

updated 10.2 years ago by andrew • 0 • written 10.2 years ago by sirintra ▴ 10

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2.6k

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software error geNet igraph genetclassifier

updated 10.5 years ago by saibar ▴ 20 • written 10.5 years ago by alakatos ▴ 130

20 results • Page 1 of 1

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Comment: msmsTests, inconsistent sign between lFC.Av and LogFC by Ben • 0

Continued here due to posting difficulties: Extract from the results table: ``` Inhibitor Vehicle lFC.Av LogFC ... F1 0.0 27…

Answer: DESeq2 for 16S rRNA Analysis by James W. MacDonald 68k

The Wald test is only meant for comparison of two groups at a time, so it depends on what you mean by 'analyze across multiple groups at a …

Comment: MetaDE.pvalue: Error in xj[i]: invalid subscript type 'list' by varying.mastodon.isyn • 0

Oh, that error! I remember wrestling with that one for hours when I was first learning Python. Turns out I was trying to use a list itself …

Comment: Confirm that OpenStats will not be archived (pryr dependency) by Marina • 0

Thank you!

Comment: AnnotationForge makeOrgPackage rsqlite_send_query error by ansley.r.burtch • 0

Hi! I am sure you are well into your career now and haven't worked on this for a while, but I wanted to let you know this is still helping …

Votes

A: DESeq2 - VST eliminates zero values

Comment: Normalise to a housekeeping gene in DESEq2

Comment: limpa analysis advice

C: AnnotationForge makeOrgPackage rsqlite_send_query error

Answer: Limpa Pipeline Order

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Popular Question to James W. MacDonald 68k