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Showing :
subsetting
•
reset
1
vote
2
replies
1.4k
views
object of type 'externalptr' is not subsettable in R4.0 - with COM Object
r4.0
ComponentObjectModel
subsetting
18 months ago • updated 17 months ago
Duy Duc
• 0
0
votes
5
replies
2.6k
views
Grange object subsetting using seqnames
Seqnames
makeGRangesFromDataFrame
GRanges
Subsetting
GenomicRanges
2.8 years ago
rtrivedi1
▴ 10
0
votes
2
replies
1.2k
views
DataFrame matrix subsetting
DataFrame
subsetting
S4Vectors
updated 5.3 years ago by
Hervé Pagès
16k • written 5.3 years ago by
felix.ernst
• 0
4
votes
7
replies
4.5k
views
removing rows from SingleCellExperiment container
sce
singlecellexperiment
scRNAseq
subsetting
updated 5.3 years ago by
Aaron Lun
★ 28k • written 5.3 years ago by
TJ
• 0
1
vote
1
reply
971
views
Subsetting GRanges objext
GRanges
subsetting
updated 5.7 years ago by
James W. MacDonald
65k • written 5.7 years ago by
lalchungnungabt17
• 0
2
votes
5
replies
1.7k
views
rlog, lfcShrink and vst on gene subset
deseq2
subsetting
plot
updated 5.9 years ago by
Michael Love
41k • written 5.9 years ago by
giulia.pasquesi
▴ 10
1
vote
2
replies
1.3k
views
Subsetting GSE data with information from two different slots
GSE
subsetting
microarray
updated 6.5 years ago by
Axel Klenk
★ 1.0k • written 6.5 years ago by
A
▴ 40
3
votes
4
replies
6.1k
views
Subset GRanges object into new object
R
genomicranges
subsetting
6.5 years ago
jhanks1981
• 0
4
votes
3
replies
3.8k
views
subsetting GRanges object based on gene IDs
genomicranges
genomicfeatures
granges
subsetting
6.7 years ago
Assa Yeroslaviz
★ 1.5k
0
votes
1
reply
2.0k
views
Subsetting/subsequencing AAStringSet containing sequences of unequal length
biostrings
aastringset
subsetting
updated 7.0 years ago by
Hervé Pagès
16k • written 7.0 years ago by
bri.isabella
• 0
0
votes
1
reply
1.2k
views
HTqPCR: bug in subsetting qPCRset
HTqPCR
htqpcr
subsetting
updated 7.3 years ago by
henrik.seidel
▴ 40 • written 7.5 years ago by
Guido Hooiveld
★ 3.9k
0
votes
0
replies
937
views
Subsetting and Transforming
subsetting
gate
flowcore
updated 7.3 years ago by
Martin Morgan
25k • written 7.3 years ago by
smajor
• 0
1
vote
2
replies
963
views
VariantAnnotation CollapsedVCF trouble
variantannotation
subsetting
7.6 years ago
Fabian Grammes
▴ 20
1
vote
2
replies
2.0k
views
Subsetting GRanges based on metadata
GRanges
metadata
subsetting
updated 7.7 years ago by
Michael Lawrence
★ 11k • written 7.7 years ago by
mdeea123
▴ 10
3
votes
7
replies
6.6k
views
edgeR subsetting DGEList by column/sample
edger
subsetting
dgelist
updated 7.8 years ago by
Gordon Smyth
50k • written 7.8 years ago by
mnaymik
▴ 10
4
votes
4
replies
1.7k
views
Limma Elist subsetting
microarray
limma
subsetting
7.9 years ago
arfranco
▴ 130
4
votes
2
replies
1.5k
views
drop levels in eSet pData
subsetting
eSet
8.1 years ago
Shamim Sarhadi
▴ 20
0
votes
1
reply
1.3k
views
Inconsistent Subseting using norm2Filter in FlowCore
flowcore
gate
subsetting
filter
updated 8.6 years ago by
Jiang, Mike
★ 1.3k • written 8.6 years ago by
peterfoster
▴ 20
3
votes
2
replies
1.3k
views
Get a complete view of a long DNA sequence of a Biostrings object in R
biostrings
subsetting
View
dnastring
dnaseq
updated 8.7 years ago by
James W. MacDonald
65k • written 8.7 years ago by
arado1
• 0
2
votes
1
reply
1.2k
views
naiveRandRUV Error When k is 1
RUVNormalize
Subsetting
updated 8.8 years ago by
laurent.jacob
▴ 10 • written 8.9 years ago by
Dario Strbenac
★ 1.5k
20 results • Page
1 of 1
Recent ...
Replies
Comment: Deseq2 and Normalization of RNA sequencing data
by
kcarey
• 0
Noise in terms of expression...to make sure that the information reported is not due to artifacts and actually expression. When I had FPKM …
Answer: NEED FOR NESSASORY HELP
by
Gordon Smyth
50k
Is this quesion related to your earlier question? https://support.bioconductor.org/p/9157127/ If you've already done an edgeR analysis, yo…
Answer: Gene-by-sample covariates in limma
by
Gordon Smyth
50k
Your first method would be valid if, instead of taking ratios, you instead used the differences between the log-transformed 13C and 12C int…
Answer: Why does GSEA on edgeR results for randomized samples give highly significant p-
by
Gordon Smyth
50k
You have discovered something that I have pointed out many times on this forum. fgsea does not implement the classic GSEA method published …
Comment: Once again a "Model matrix not full rank"
by
James W. MacDonald
65k
In that case both time and treatment are identical things, so choose one and go with it.
Votes
Bioconductor 3.19 is Released!
A: Error in DESeqDataSet : some values in assay are not integers
Bioconductor 3.19 is Released!
Bioconductor 3.19 is Released!
Answer: DEseq2 coefficient
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