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Showing :
Biomart
•
reset
2
votes
2
replies
1.3k
views
mmusculus GO terms with Biomart
biomaRt
GOTerms
4.7 years ago
salvin
• 0
1
vote
2
replies
1.4k
views
Extract flanking sequence for a list of genes with biomaRt
biomaRt
4.7 years ago
lessismore
▴ 20
1
vote
2
replies
1.2k
views
Error running ensembl via Biomart disk I/O error
biomaRt
conicsmat
updated 4.7 years ago by
Mike Smith
★ 6.6k • written 4.7 years ago by
saadmurtazakhan
▴ 10
0
votes
2
replies
1.9k
views
News:
Ensembl 103 has been released
biomaRt
ensembldb
Ensembl
ensemblVEP
Biomart
4.7 years ago • updated 4.5 years ago
mchakiachvili
▴ 20
0
votes
2
replies
1.6k
views
Error log when I use biomaRt getBM
biomaRt
annotationTools
updated 4.7 years ago by
Mike Smith
★ 6.6k • written 4.7 years ago by
niyamurry
• 0
1
vote
2
replies
1.1k
views
Problem with biomaRt::select
biomaRt
4.8 years ago
analeonpalacio
▴ 10
1
vote
2
replies
1.3k
views
How to get both hgnc_symbol and all cdna_coding_start values associated?
biomaRt
cdna
keys
gene_start
4.8 years ago
bastien_chassagnol
• 0
2
votes
2
replies
4.8k
views
mapping gene type or biotype to ENSEMBL ID
ensembldb
biomaRt
org.Hs.eg.db
Annotation
updated 4.8 years ago by
Johannes Rainer
★ 2.1k • written 4.8 years ago by
Anubhav
• 0
4
votes
6
replies
3.0k
views
Extract canonical coding sequence with getBM
Bioconductor
biomaRt
4.8 years ago
heiko_kin
▴ 60
0
votes
7
replies
2.5k
views
Cannot call biomaRt library.
installationofbioconductor
biomaRt
4.8 years ago
dolivenca3
• 0
0
votes
4
replies
5.9k
views
Problems Installing biomaRt
biomart
linux
updated 4.9 years ago by
Martin Morgan
25k • written 7.5 years ago by
christopher.mcfall
• 0
0
votes
1
reply
1.7k
views
Accessing local installation of biomart results in "Unexpected format to the list of available marts"
mart
martconfigurator
biomaRt
xml
updated 4.9 years ago by
Mike Smith
★ 6.6k • written 4.9 years ago by
anhvo711
• 0
1
vote
2
replies
11k
views
Error in UseMethod("filter_") : no applicable method for 'filter_' applied to an object of class "c('tbl_SQLiteConnection', 'tbl_dbi', 'tbl_sql', …
ErrorinUseMethod("filter_")
biomaRt
updated 4.9 years ago by
Angela
• 0 • written 4.9 years ago by
antara
▴ 10
0
votes
1
reply
3.2k
views
biomart - Human Transcriptome Array 2.0 - Affymetrix - ID to Symbol Problem
biomaRt
updated 4.9 years ago by
Mike Smith
★ 6.6k • written 4.9 years ago by
Sergio
• 0
0
votes
0
replies
1.1k
views
News:
Ensembl 102 has been released
Ensembl
biomaRt
BioMar
ensembldb
4.9 years ago
mchakiachvili
▴ 20
4
votes
6
replies
2.2k
views
biomaRt "longer object length is not a multiple of shorter object length"
biomaRt
4.9 years ago
Linda
• 0
1
vote
9
replies
4.0k
views
How can I retrieve a protein's coding sequence using getSequence
biomaRt
4.9 years ago
heiko_kin
▴ 60
1
vote
2
replies
1.7k
views
How to mimic biomaRt results with AnnotationHub?
biomaRt
AnnotationHub
5.0 years ago
Ezgi
▴ 60
3
votes
3
replies
9.4k
views
BiomaRt::getBM Error in UseMethod(filter_)
biomaRt
5.0 years ago
suyang
• 0
4
votes
3
replies
2.3k
views
OrganismDbi throws error for Oryza Sativa indica org.db preparation
GenomeInfoDb
OrganismDbi
biomaRt
updated 5.0 years ago by
James W. MacDonald
68k • written 5.0 years ago by
rohitsatyam102
▴ 20
0
votes
4
replies
3.0k
views
Cannot properly finish biomaRt query
software error
annotation
biomart
updated 5.0 years ago by
anhvo711
• 0 • written 5.4 years ago by
bas_work
▴ 30
0
votes
3
replies
3.0k
views
biomart archive version
annotation
biomart
5.0 years ago
raakesh_7111
• 0
2
votes
6
replies
2.3k
views
getLDS error in scan
biomaRt
getLDS
convert
gene symbols
updated 5.0 years ago by
Mike Smith
★ 6.6k • written 5.0 years ago by
mvis1231
• 0
5
votes
8
replies
19k
views
Ensembl site unresponsive
ensembl
biomart
updated 4.5 years ago by
tommaso.gastaldi
• 0 • written 5.0 years ago by
lirongrossmann
▴ 50
4
votes
4
replies
4.0k
views
biomaRt error Error in scan.... Line 1 did not have 3 elements.
biomaRt
updated 5.0 years ago by
Mike Smith
★ 6.6k • written 5.0 years ago by
amp221
▴ 20
21
votes
34
replies
11k
views
Biomart error when updating to R 4.0.2
Biomart
updated 5.0 years ago by
Mike Smith
★ 6.6k • written 5.0 years ago by
landenshanie
▴ 40
0
votes
4
replies
2.1k
views
Question: error in Bioconductor getBM
biomaRt
getBM
updated 5.1 years ago by
James W. MacDonald
68k • written 5.1 years ago by
nitandressa
• 0
2
votes
11
replies
8.0k
views
biomaRT connexion problem make failed my unit tests
biomaRt
Peer's Certificate
Ensembl
updated 4.7 years ago by
Mike Smith
★ 6.6k • written 5.1 years ago by
ilysR
• 0
4
votes
17
replies
3.7k
views
annotation conversion from old microarray to latest Entrez and Ensembl ID
biomaRt
annotation
Ensembl
annotationHub
updated 5.2 years ago by
Kevin Blighe
★ 4.0k • written 5.2 years ago by
Didi
▴ 10
0
votes
1
reply
1.3k
views
News:
Ensembl 101 hase been released
Ensembl
BioMart
News
5.2 years ago
mchakiachvili
▴ 20
5
votes
4
replies
16k
views
Getting rs ids using chr coordinates | Biomart
SNP
rs id
Biomart
Chromosome
coordinates
updated 2.3 years ago by
James W. MacDonald
68k • written 5.2 years ago by
Mahan
• 0
2
votes
1
reply
3.2k
views
ensembl to hgnc symbols creates duplicates
r
biomart
genemap
TPM
updated 5.2 years ago by
Kevin Blighe
★ 4.0k • written 5.2 years ago by
Matan G.
▴ 60
6
votes
11
replies
2.8k
views
"associated_gene" attribute from biomaRt returns too few values - SNP(rsID dataset)
r
biomart
SNP
annotation
HUGO
updated 5.2 years ago by
Mike Smith
★ 6.6k • written 5.2 years ago by
aroso491
• 0
0
votes
6
replies
2.0k
views
Error when trying to access BiomaRt from a cluster
biomaRt
R
cluster
updated 5.3 years ago by
Martin Morgan
25k • written 5.3 years ago by
camerond
• 0
2
votes
2
replies
1.5k
views
How to retrieve attributes from a certain feature page using biomaRt
biomaRt
getBM
updated 5.3 years ago by
James W. MacDonald
68k • written 5.3 years ago by
georgewwp
• 0
0
votes
2
replies
1.7k
views
TCGAbiolinks BioMart error
TCGAbiolinks
BioMart
updated 5.3 years ago by
James W. MacDonald
68k • written 5.3 years ago by
Talip
▴ 10
1
vote
3
replies
3.5k
views
Convert mouse gene ids to hamster gene ids
biomart
R
ensembl
updated 2.7 years ago by
Kevin Blighe
★ 4.0k • written 5.3 years ago by
rykerklie7
• 0
0
votes
0
replies
1.1k
views
RDAVIDWebService Package Official Gene Symbol IDs in GO Term Tables
RDAVIDWebService
Gene Ontology
GOTerm
biomaRt
5.3 years ago
ra711
• 0
0
votes
2
replies
1.1k
views
biomaRt asked to report: The number of columns in the result table does not equal the number of attributes in the query.
biomart
updated 5.4 years ago by
James W. MacDonald
68k • written 5.4 years ago by
daniil.sarkisyan
▴ 10
0
votes
5
replies
2.0k
views
Error with using getBM function in biomaRt
go
r
software error
R
biomaRt
5.4 years ago
morteza.aslanzadeh
▴ 30
1
vote
5
replies
1.9k
views
Invalid result error in biomaRt::getBM with archive Ensembl versions
biomart
updated 5.4 years ago by
James W. MacDonald
68k • written 5.4 years ago by
Ryan C. Thompson
★ 7.9k
1
vote
5
replies
3.4k
views
Peer's Certificate issuer is not recognized
BioMart
updated 5.5 years ago by
Mike Smith
★ 6.6k • written 5.5 years ago by
ilysR
• 0
1
vote
0
replies
1.1k
views
News:
Ensembl 100 has been released
biomart
ensembl
e100
mart
news
News
5.5 years ago
Thomas Maurel
▴ 800
1
vote
2
replies
681
views
The query to the BioMart webservice returned an invalid result: biomaRt expected a character string of length 1
biomart
5.5 years ago
xiaolei.zhou
• 0
1
vote
4
replies
3.5k
views
Issue with Biomart- cannot access ensembl
biomaRT
updated 13 months ago by
Abiologist
• 0 • written 5.5 years ago by
RJW63
• 0
1
vote
2
replies
1.9k
views
getBM biomart ensembl Error report
biomaRt
ensembl
updated 5.5 years ago by
Mike Smith
★ 6.6k • written 5.5 years ago by
nina.hahn
▴ 10
0
votes
1
reply
757
views
biomaRt: The query to the BioMart webservice returned an invalid result: biomaRt expected a character string of length 1.
biomart
updated 5.5 years ago by
swbarnes2
★ 1.4k • written 5.5 years ago by
bak16
• 0
2
votes
1
reply
902
views
GO term "GO:1904936 interneuron migration" not found using biomart
biomart
goterm
updated 5.5 years ago by
Mike Smith
★ 6.6k • written 5.5 years ago by
A
• 0
2
votes
2
replies
817
views
BioMart Error 28
software error
biomart
error28
updated 5.6 years ago by
Kevin Blighe
★ 4.0k • written 5.6 years ago by
heiko_kin
▴ 60
2
votes
2
replies
963
views
BiomaRt, getBM error
biomaRt
updated 5.6 years ago by
Mike Smith
★ 6.6k • written 5.6 years ago by
ysaboss
• 0
1,081 results • Page
4 of 22
Recent ...
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The package has no such inbuilt function but you are free to use the vst (or any normalized) counts to train a regression model or classifi…
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thank you so much for answering Dr. Love!
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