Bioconductor DMR

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4.2k

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bumphunter DMR DMR analysis minfi bioconductor

updated 7.4 years ago by rafa ▴ 60 • written 7.4 years ago by chelsey.ju • 0

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3.6k

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bsseq dmr ttest pvalue

updated 8.3 years ago by James W. MacDonald 66k • written 8.3 years ago by enricoferrero ▴ 660

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2.5k

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dmr methylation deseq2 bsseq biseq

updated 8.6 years ago by Kasper Daniel Hansen ★ 6.5k • written 8.6 years ago by enricoferrero ▴ 660

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1.8k

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dmr MethylationArrayData DMRcatedata

updated 3.5 years ago by James W. MacDonald 66k • written 3.5 years ago by Julie • 0

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1.7k

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ChAMP DMR champ.DMR

5.6 years ago yuabrahamliu • 0

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1.7k

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methylation linear model dmr bsseq biseq

8.5 years ago enricoferrero ▴ 660

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1.5k

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dmrcate dmr analysis dmr

updated 7.3 years ago by Tim Peters ▴ 180 • written 7.3 years ago by alexandria.andrayas ▴ 10

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1.5k

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dmrseq dmr dmrs bisulfite methylation

updated 6.2 years ago by keegan ▴ 60 • written 6.3 years ago by l.kremer • 0

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1.4k

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bumphunter DMR doparallel multicore

updated 10 months ago by Alessandro • 0 • written 6.0 years ago by arce.domingo.1407 • 0

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1.4k

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DMR Methylation R Gviz

updated 6 months ago by Robert Ivanek ▴ 730 • written 3.0 years ago by ltzhou • 0

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1.3k

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ChAMP minfi DMR dmr analysis lasso

8.6 years ago AST ▴ 60

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1.2k

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illumina methylationepic 450k limma minfi dmr analysis dmr

updated 7.2 years ago by Aaron Lun ★ 28k • written 7.2 years ago by Ellen O • 0

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1.2k

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BiSeq DMR

updated 3.9 years ago by James W. MacDonald 66k • written 3.9 years ago by akhaira • 0

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926

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bumphunter DMR methylation minfi

4.3 years ago i.s.brorson • 0

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861

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DMR bumphunter EPIC chip

4.3 years ago i.s.brorson • 0

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812

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ChAMP DMR

updated 4.0 years ago by Yuan Tian ▴ 290 • written 4.0 years ago by olive8306 • 0

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759

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Biseq Methylation DMP DMR RRBS

3.8 years ago i.s.castanho • 0

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740

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BiSeq testClusters error dmr

3.9 years ago akhaira • 0

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721

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methylsig no replicates dmr

5.8 years ago nilaycan • 0

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549

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edgeR DMR

updated 16 months ago by Michael Love 42k • written 16 months ago by Fiona • 0

20 results • Page 1 of 1

Recent ...

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Comment: recount3 problem downloading data from source sra by PABLO ANTONIO • 0

Hello Leonardo, Thanks for jumping in and commenting on possible solutions. I noticed comparing your session info that I was using the pre…

Comment: seqlevelsStyle() not working by websterdelacruz2087055 • 0

Specify the new URL new_url <- "https://hgdownload2.cse.ucsc.edu/goldenPath/hg19/database/chromInfo.txt.gz" Use the new URL to download th…

Comment: SGSeq: moving toward diffex from SGSeq analysis by Sara • 0

Yes, thank you. I have another error now, may you please guide me. here is the code that I used till using vep: ```r # bam_path <- "~/pat…

Comment: slingshot: error with plot3d.SlingshotDataSet by Happiness • 0

Hi please i am encountering similar issue how did you fix it. Here is the code: ## Run Slingshot p3.neuron.sds <- slingshot(Embeddings(…

Answer: Identifying DEGs using limma - NanoString GeoMx-NGS RNA Expression Data by mohammedtoufiq91 ▴ 10

https://support.bioconductor.org/u/5106/ thank you very much.

Votes

Answer: Identifying DEGs using limma - NanoString GeoMx-NGS RNA Expression Data

Comment: Ensembl plants at annotationHub?

how to control age and gender effect in expression data using DESeq2

Answer: Error retrieving ensembl gene id using biomaRt...

Awards • All

Scholar to Mike Smith ★ 6.5k

Popular Question to mohammedtoufiq91 ▴ 10