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DNAMethylation
•
reset
1
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2
replies
802
views
normalizatino of dna methylation EPIC data
DNA
minfiData
minfiDataEPIC
DNAMethylation
minfi
9 months ago
user_bioinfo
• 0
0
votes
0
replies
276
views
Batch Correction while implementing QSEA package
qsea
MEDIPS
MEDIPSData
DNAMethylation
9 months ago
User3088
• 0
0
votes
0
replies
722
views
Job:
Postdoctoral Research Associate in Computational Epigenomics
Phd
SingleCell
DNAMethylation
Shanghai
JobPosting
14 months ago
xiaolong
• 0
0
votes
7
replies
2.4k
views
Methylation Analysis experiment design using Limma
DNAMethylation
limma
methylationArrayAnalysis
19 months ago
hortense96
• 0
0
votes
0
replies
659
views
DMRcate error need at least two non-NA values to interpolate
DNAMethylation
DMRcate
19 months ago
Macsue
• 0
1
vote
6
replies
1.7k
views
unable to access Annotationhub latest record
DNAMethylation
AnnotationHub
EPICv2manifest
annotation
updated 19 months ago by
Tim Peters
▴ 230 • written 19 months ago by
s.malik
• 0
1
vote
3
replies
2.2k
views
Error in GOmeth function of missMethyl when EPICv2 annotation is used
DNAMethylation
GO
MethylationArray
missMethyl
EPICv2
20 months ago • updated 14 months ago
s.malik
• 0
0
votes
4
replies
2.4k
views
Seeking Strategies for Managing Duplicate CpG Entries in EPIC v2 Manifest
DNAMethylation
EPICv2
IlluminaHumanMethylationEPICmanifest
updated 21 months ago by
James W. MacDonald
68k • written 21 months ago by
rae.alshammari
▴ 20
1
vote
4
replies
1.4k
views
limma design model for categorical variable
DNAMethylation
limmaGUI
biostatistics
limma
updated 21 months ago by
Gordon Smyth
53k • written 21 months ago by
Jitendra
▴ 10
0
votes
2
replies
743
views
Sample-specific methylation values using QSEA
DNAMethylation
cfMeDIP-seq
cfDNA
qsea
21 months ago • updated 9 months ago
User3088
• 0
1
vote
4
replies
1.6k
views
EPIC or EPICv2 demo data of brain samples. FlowSorted.DLPFC.EPIC Availability?
DNAMethylation
MethylationArray
methylationArrayAnalysis
illumina
21 months ago
mikat
• 0
0
votes
1
reply
956
views
topGO() analysis of DMPs in missMethyl methylation analysis
DNAMethylation
missMethyl
Pathways
2.6 years ago
Grace
• 0
2
votes
6
replies
1.9k
views
cpg.annotate() in DMRcate error
DNAMethylation
methylationArrayAnalysis
DMRcate
MethylationArrayData
MethylationArray
updated 2.6 years ago by
Tim Peters
▴ 230 • written 2.6 years ago by
Grace
• 0
2
votes
6
replies
1.7k
views
No enriched GO terms CpGs
DNAMethylation
missMethyl
updated 2.7 years ago by
belinda.phipson
▴ 40 • written 2.7 years ago by
Joana
• 0
0
votes
0
replies
991
views
A survey of computational setups for Illumina Infinium DNA methylation EPIC array pipeline
DNAMethylation
wateRmelon
Computation
minfi
3.3 years ago
calen.p.ryan
• 0
3
votes
8
replies
2.1k
views
Annotation using QSEA package
DNAMethylation
QSEA
MEDIP
4.4 years ago
rtrivedi1
▴ 10
3
votes
5
replies
3.4k
views
Why the LogFC and delta-beta value are different in ChAMP
DNAMethylation
ChAMP
updated 21 months ago by
sup0903
• 0 • written 4.9 years ago by
Hongbii
• 0
17 results • Page
1 of 1
Recent ...
Replies
Comment: Alternative to BrainArray custom CDF packages for Affymetrix chips?
by
insuraasanaa3scetaxrealty
• 0
Lamento que el acceso a los paquetes BrainArray esté fallando; cuando ocurren estos problemas, es util contar con recursos alternativos bie…
Comment: Getting a large intercept with DESeq2
by
Denise
• 0
Hi, Thank you very much, James and Michael, for getting back to me! I noticed the large intercept when plotting the coefficients returned …
Comment: Error installing Seqinfo
by
shepherl
4.2k
Yes and we are working on getting the updated windows binaries distributed asap! We are hopeful by the end of this week
Comment: APAlyzer
by
shepherl
4.2k
We apologize for their unresponsiveness; you could try posting your question here to see if anyone in the community could assist in the me…
Answer: Error installing Seqinfo
by
fabio.marroni
• 0
I am answering my own question. I found the solution thanks to [this post][1], and I am writing here the very simple procedure: 1) Instal…
Votes
Answer: replace cat with message in glmTreat when lfc = 0
Answer: replace cat with message in glmTreat when lfc = 0
Comment: Issues with downloading biomaRt - SeqInfo and S4 Vectors
Answer: Issues with downloading biomaRt - SeqInfo and S4 Vectors
Answer: Issues with downloading biomaRt - SeqInfo and S4 Vectors
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Gordon Smyth
53k
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James W. MacDonald
68k
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anjanaram1
▴ 10
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Stephen Piccolo
▴ 600
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Maria Doyle
▴ 100
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