Bioconductor DNAMethylation

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DNA minfiData minfiDataEPIC DNAMethylation minfi

6 months ago user_bioinfo • 0

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228

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qsea MEDIPS MEDIPSData DNAMethylation

7 months ago User3088 • 0

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609

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Phd SingleCell DNAMethylation Shanghai JobPosting

12 months ago xiaolong • 0

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2.2k

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DNAMethylation limma methylationArrayAnalysis

16 months ago hortense96 • 0

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598

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DNAMethylation DMRcate

17 months ago Macsue • 0

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DNAMethylation AnnotationHub EPICv2manifest annotation

updated 17 months ago by Tim Peters ▴ 230 • written 17 months ago by s.malik • 0

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DNAMethylation GO MethylationArray missMethyl EPICv2

18 months ago • updated 11 months ago s.malik • 0

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DNAMethylation EPICv2 IlluminaHumanMethylationEPICmanifest

updated 18 months ago by James W. MacDonald 68k • written 18 months ago by rae.alshammari ▴ 20

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DNAMethylation limmaGUI biostatistics limma

updated 19 months ago by Gordon Smyth 53k • written 19 months ago by Jitendra ▴ 10

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675

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DNAMethylation cfMeDIP-seq cfDNA qsea

19 months ago • updated 7 months ago User3088 • 0

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1.5k

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DNAMethylation MethylationArray methylationArrayAnalysis illumina

19 months ago mikat • 0

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900

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DNAMethylation missMethyl Pathways

2.4 years ago Grace • 0

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DNAMethylation methylationArrayAnalysis DMRcate MethylationArrayData MethylationArray

updated 2.4 years ago by Tim Peters ▴ 230 • written 2.4 years ago by Grace • 0

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DNAMethylation missMethyl

updated 2.5 years ago by belinda.phipson ▴ 40 • written 2.5 years ago by Joana • 0

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DNAMethylation wateRmelon Computation minfi

3.1 years ago calen.p.ryan • 0

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DNAMethylation QSEA MEDIP

4.2 years ago rtrivedi1 ▴ 10

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DNAMethylation ChAMP

updated 18 months ago by sup0903 • 0 • written 4.7 years ago by Hongbii • 0

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Comment: Which of apeglm and ashr may be more appropriate for pseudobulked DESeq2 analysi by ATpoint ★ 4.9k

Not that this is a good way of doing it, but if I have single-cell data and the gut feeling that methods disagree a lot then I usually run …

Answer: A0A287BB68 not recognized as UNPROT key in org.Ss.eg.db using AnnotationDbi::sel by games • 0

The error occurs because accession A0A287BB68 is not in the org.Ss.eg.db database, so AnnotationDbi::select() cannot identify a valid key. …

Answer: A0A287BB68 not recognized as UNPROT key in org.Ss.eg.db using AnnotationDbi::sel by games • 0

The error occurs because accession A0A287BB68 is not in the org.Ss.eg.db database, so AnnotationDbi::select() cannot identify a valid key. …

Comment: org.Ss.eg.db MAMDC4 maps to incorrect UNIPROT key by thundernight • 0

I'm actually having the same problem. [Spanish dictionary][1] [1]: https://spanishdictionary.cc

Comment: voomLmFit fitted log-CPM values by Gordon Smyth 53k

The fitted values are on the log2CPM scale. I would have told you if they were not! I think you may be getting confused by the differences…

Votes

A: How barcode-plot enrichment is calculated?

Answer: ROAST compare results with complex design

How to account for solvent controls in DESeq2 when comparing follicular vs luteal phase?

Answer: How to account for solvent controls in DESeq2 when comparing follicular vs lutea

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