Bioconductor DOSE

Showing : DOSE • reset

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1.3k

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DOSE DOSE

updated 21.2 years ago by "Hüsing, Johannes" ▴ 60 • written 21.2 years ago by Lang Chen ▴ 100

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3.1k

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clusterprofiler DOSE GSEA_internal USER_DATA leading edge Analysis

7.6 years ago Riba Michela ▴ 90

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1.2k

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DOSE DOSE

20.2 years ago Arne.Muller@aventis.com ▴ 620

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3.0k

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Microarray Regression Cancer limma DOSE Microarray Regression Cancer limma DOSE

updated 16.0 years ago by Ana Conesa ▴ 340 • written 16.0 years ago by Daniel Brewer ★ 1.9k

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2.5k

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affy limma DOSE affy limma DOSE

updated 13.5 years ago by Naomi Altman ★ 6.0k • written 13.5 years ago by fire1976 wyoming ▴ 380

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2.0k

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software error reactomePA DOSE DO.db there is no package called ‘DO.db’

updated 4.4 years ago by Martin Morgan 25k • written 4.4 years ago by goodwinjinesh • 0

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1.5k

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Annotation cdf probe affy oligo xps DOSE Annotation cdf probe affy oligo xps DOSE

updated 13.4 years ago by branislav misovic ▴ 120 • written 13.4 years ago by Ramil Nurtdinov ▴ 10

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1.8k

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Microarray DOSE Microarray DOSE

updated 10.5 years ago by Pekka Kohonen ▴ 190 • written 10.5 years ago by Guest User ★ 13k

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1.8k

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Annotation cdf probe affy oligo xps DOSE Annotation cdf probe affy oligo xps DOSE

updated 13.4 years ago by Benilton Carvalho ★ 4.3k • written 13.4 years ago by branislav misovic ▴ 120

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4.2k

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clusterProfiler reactomepa dose

updated 18 months ago by 12133067 • 0 • written 7.7 years ago by enricoferrero ▴ 660

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4.5k

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DOSE DOSE

14.8 years ago zhihua zhang ▴ 50

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1.6k

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Annotation DOSE Annotation DOSE

updated 15.9 years ago by Marc Carlson ★ 7.2k • written 15.9 years ago by Roumyana Yordanova ▴ 110

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1.9k

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BiocParallel DOSE

updated 7.5 years ago by Martin Morgan 25k • written 7.5 years ago by Guido Hooiveld ★ 3.9k

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2.1k

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Microarray Normalization GO limma DOSE Microarray Normalization GO limma DOSE

updated 11.1 years ago by Ryan C. Thompson ★ 7.9k • written 11.1 years ago by Sandhya Pemmasani Kiran ▴ 40

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989

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DOSE DOSE

updated 21.1 years ago by Eric Blalock ▴ 250 • written 21.1 years ago by Phguardiol@aol.com ▴ 720

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686

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DOSE DOSE

updated 21.0 years ago by A.J. Rossini ▴ 810 • written 21.0 years ago by Lang Chen ▴ 100

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993

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DOSE DOSE

updated 20.1 years ago by Francois Collin ▴ 130 • written 20.1 years ago by Arne.Muller@aventis.com ▴ 620

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1.3k

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limma DOSE limma DOSE

updated 19.4 years ago by Gordon Smyth 50k • written 19.4 years ago by Arne.Muller@aventis.com ▴ 620

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1.2k

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Normalization vsn DOSE Normalization vsn DOSE

updated 19.4 years ago by Anja.von.Heydebreck@merck.de ▴ 10 • written 19.4 years ago by Arne.Muller@aventis.com ▴ 620

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2.1k

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Regression DOSE Regression DOSE

updated 19.3 years ago by Liaw, Andy ▴ 360 • written 19.3 years ago by Arne.Muller@aventis.com ▴ 620

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1.5k

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limma DOSE limma DOSE

updated 19.2 years ago by Hua Weng ▴ 60 • written 19.2 years ago by Gordon Smyth 50k

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1.5k

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affy DOSE BRAIN affy DOSE BRAIN

updated 17.5 years ago by Sean Davis 21k • written 17.5 years ago by Kimpel, Mark W ▴ 890

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1.3k

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Microarray DOSE Microarray DOSE

14.2 years ago Massimo Pinto ▴ 390

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1.5k

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Microarray limma DOSE Microarray limma DOSE

updated 13.0 years ago by fire1976 wyoming ▴ 380 • written 13.0 years ago by Gordon Smyth 50k

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1.3k

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Microarray limma DOSE Microarray limma DOSE

updated 13.0 years ago by sense_0109 ▴ 40 • written 13.0 years ago by Gordon Smyth 50k

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1.8k

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GO clusterProfiler DOSE GO clusterProfiler DOSE

updated 10.8 years ago by Dan Tenenbaum ★ 8.2k • written 10.8 years ago by Guest User ★ 13k

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1.4k

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RNASeq DOSE DESeq2 RNASeq DOSE DESeq2

9.7 years ago Shi, Tao ▴ 720

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1.6k

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deseq2 edger dose rna-seq

updated 8.5 years ago by Aaron Lun ★ 28k • written 8.5 years ago by JacobK • 0

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1.8k

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deseq2 multiple time points dose

updated 7.2 years ago by Michael Love 41k • written 7.2 years ago by stwestreich • 0

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biomart dose

updated 6.9 years ago by James W. MacDonald 65k • written 6.9 years ago by ankita.mandal28529 • 0

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DOSE package installation windows10

6.8 years ago Yisong Zhen ▴ 200

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3.1k

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DOSE clusterprofiler

updated 6.7 years ago by Guangchuang Yu ★ 1.2k • written 6.7 years ago by xr2120 • 0

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3.5k

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DOSE clusterprofiler annotation gene ontology gene set enrichment

updated 6.5 years ago by Guangchuang Yu ★ 1.2k • written 6.5 years ago by kirannbishwa01 ▴ 10

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1.6k

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DOSE ReactomePA enrichMap enrichPathway

updated 6.3 years ago by Guangchuang Yu ★ 1.2k • written 6.3 years ago by jan.soderman • 0

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990

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software error go dose heatplot gseGo

5.3 years ago aboumarshal • 0

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5.6k

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clusterProfiler DOSE

updated 16 months ago by Nick O • 0 • written 20 months ago by ummscr • 0

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849

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DOSE ReactomePA

3.2 years ago Lluís Revilla Sancho ▴ 730

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1.1k

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edgeR DOSE edgeR DOSE

10.8 years ago Sandhya Pemmasani Kiran ▴ 40

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160

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DOSE enrichplot clusterProfiler

updated 22 days ago by Guido Hooiveld ★ 3.9k • written 26 days ago by Lucie • 0

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1.4k

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GO Cancer Rgraphviz clusterProfiler DOSE GO Cancer Rgraphviz clusterProfiler DOSE

10.8 years ago Martin Morgan 25k

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1.7k

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Microarray limma DOSE Microarray limma DOSE

10.5 years ago Gordon Smyth 50k

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1.2k

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webbioc DOSE webbioc DOSE

20.5 years ago Colin A. Smith ▴ 220

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3.6k

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clusterProfiler enrichplot clusterpro doseR dose

updated 22 months ago by Guido Hooiveld ★ 3.9k • written 22 months ago by rama ▴ 10

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1.7k

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enrichment genesetenrichment dose gosemsim

9.5 years ago Guangchuang Yu ★ 1.2k

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1.2k

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compilation error DOSE

6.0 years ago alper.kucukural ▴ 10

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2.7k

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clusterProfiler DOSE

8.4 years ago Vinicius Henrique da Silva ▴ 40

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996

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probe limma DOSE probe limma DOSE

20.0 years ago Arne.Muller@aventis.com ▴ 620

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1.5k

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affy DOSE affy DOSE

19.9 years ago Arne.Muller@aventis.com ▴ 620

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1.1k

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DOSE DOSE

19.7 years ago Arne.Muller@aventis.com ▴ 620

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1.0k

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Bayesian Clustering Leukemia affy PROcess DOSE Bayesian Clustering Leukemia affy PROcess

21.1 years ago Phguardiol@aol.com ▴ 720

50 results • Page 1 of 1

Recent ...

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Comment: Mac ARM64 build report for BioC 3.19 from 'kjohnson3' reporting ERROR which it by Hervé Pagès 16k

Indeed. Calculations involving floating point arithmetic are architecture-dependent, and testing the results should be done with `all.equal…

Comment: How to use bootRanges to bootstrap small RNA loci (nullranges package) by Poonam • 0

I will follow what you suggested. I didn't use max gap anywhere. I was following statistic I and regarding the size of features, my small…

Comment: How to use bootRanges to bootstrap small RNA loci (nullranges package) by Michael Love 41k

Oh I see, for the second question, I don't have a great answer. I typically think of one set as the anchor, whose ascertainment is driving …

Comment: Help with running egsea() by James W. MacDonald 65k

Oh, right. Ideally you would use NCBI (aka Entrez gene) IDs because they are way more likely to be unique. Gene symbols are broken down int…

Comment: Help with running egsea() by Chris • 0

Thanks James! I update the question. The last question mean when we use `buildIdx()`, could we use gene symbol instead of entrezID. However…

Votes

Answer: Mac ARM64 build report for BioC 3.19 from 'kjohnson3' reporting ERROR which it

Comment: Help with running egsea()

Answer: Trim/Filter out-of-bounds GRanges

Comment: Help with running egsea()

Answer: How to save the DEXSeq results

Awards • All

Scholar to Michael Love 41k

Popular Question to Malcolm Cook ★ 1.6k

Teacher to Gordon Smyth 50k