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Showing :
Subsetting
•
reset
1
vote
2
replies
1.4k
views
object of type 'externalptr' is not subsettable in R4.0 - with COM Object
r4.0
ComponentObjectModel
subsetting
18 months ago • updated 17 months ago
Duy Duc
• 0
0
votes
5
replies
2.6k
views
Grange object subsetting using seqnames
Seqnames
makeGRangesFromDataFrame
GRanges
Subsetting
GenomicRanges
2.8 years ago
rtrivedi1
▴ 10
0
votes
2
replies
1.2k
views
DataFrame matrix subsetting
DataFrame
subsetting
S4Vectors
updated 5.3 years ago by
Hervé Pagès
16k • written 5.3 years ago by
felix.ernst
• 0
4
votes
7
replies
4.5k
views
removing rows from SingleCellExperiment container
sce
singlecellexperiment
scRNAseq
subsetting
updated 5.3 years ago by
Aaron Lun
★ 28k • written 5.3 years ago by
TJ
• 0
1
vote
1
reply
969
views
Subsetting GRanges objext
GRanges
subsetting
updated 5.7 years ago by
James W. MacDonald
65k • written 5.7 years ago by
lalchungnungabt17
• 0
2
votes
5
replies
1.7k
views
rlog, lfcShrink and vst on gene subset
deseq2
subsetting
plot
updated 5.9 years ago by
Michael Love
41k • written 5.9 years ago by
giulia.pasquesi
▴ 10
1
vote
2
replies
1.3k
views
Subsetting GSE data with information from two different slots
GSE
subsetting
microarray
updated 6.5 years ago by
Axel Klenk
★ 1.0k • written 6.5 years ago by
A
▴ 40
3
votes
4
replies
6.1k
views
Subset GRanges object into new object
R
genomicranges
subsetting
6.5 years ago
jhanks1981
• 0
4
votes
3
replies
3.8k
views
subsetting GRanges object based on gene IDs
genomicranges
genomicfeatures
granges
subsetting
6.6 years ago
Assa Yeroslaviz
★ 1.5k
0
votes
1
reply
2.0k
views
Subsetting/subsequencing AAStringSet containing sequences of unequal length
biostrings
aastringset
subsetting
updated 7.0 years ago by
Hervé Pagès
16k • written 7.0 years ago by
bri.isabella
• 0
0
votes
1
reply
1.2k
views
HTqPCR: bug in subsetting qPCRset
HTqPCR
htqpcr
subsetting
updated 7.3 years ago by
henrik.seidel
▴ 40 • written 7.4 years ago by
Guido Hooiveld
★ 3.9k
0
votes
0
replies
931
views
Subsetting and Transforming
subsetting
gate
flowcore
updated 7.3 years ago by
Martin Morgan
25k • written 7.3 years ago by
smajor
• 0
1
vote
2
replies
959
views
VariantAnnotation CollapsedVCF trouble
variantannotation
subsetting
7.6 years ago
Fabian Grammes
▴ 20
1
vote
2
replies
2.0k
views
Subsetting GRanges based on metadata
GRanges
metadata
subsetting
updated 7.7 years ago by
Michael Lawrence
★ 11k • written 7.7 years ago by
mdeea123
▴ 10
3
votes
7
replies
6.6k
views
edgeR subsetting DGEList by column/sample
edger
subsetting
dgelist
updated 7.8 years ago by
Gordon Smyth
50k • written 7.8 years ago by
mnaymik
▴ 10
4
votes
4
replies
1.7k
views
Limma Elist subsetting
microarray
limma
subsetting
7.9 years ago
arfranco
▴ 130
4
votes
2
replies
1.5k
views
drop levels in eSet pData
subsetting
eSet
8.1 years ago
Shamim Sarhadi
▴ 20
0
votes
1
reply
1.3k
views
Inconsistent Subseting using norm2Filter in FlowCore
flowcore
gate
subsetting
filter
updated 8.6 years ago by
Jiang, Mike
★ 1.3k • written 8.6 years ago by
peterfoster
▴ 20
3
votes
2
replies
1.3k
views
Get a complete view of a long DNA sequence of a Biostrings object in R
biostrings
subsetting
View
dnastring
dnaseq
updated 8.7 years ago by
James W. MacDonald
65k • written 8.7 years ago by
arado1
• 0
2
votes
1
reply
1.2k
views
naiveRandRUV Error When k is 1
RUVNormalize
Subsetting
updated 8.8 years ago by
laurent.jacob
▴ 10 • written 8.9 years ago by
Dario Strbenac
★ 1.5k
20 results • Page
1 of 1
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Replies
Answer: Dominance Index for Shotgun Metagenomics Data
by
Leo Lahti
▴ 30
1. Note that Simpson's dominance index (\lambda) is a different index than inverse Simpson (1/\lambda) or reciprocal Simpson (1-\lambda). T…
Comment: Math expression in shapeCustom legend in EnhancedVolcano
by
pl23
• 0
Thank you very much - that worked perfectly! Word of warning to those who try this: it screws up the other legends because of the markdown …
Answer: PCA plot suggestions
by
Michael Love
41k
For help with interpretation and design of analysis, I recommend working with a local statistician. Due to time restrictions, I can only…
Comment: DESeq2 Error in `.rowNamesDF<-`(x, value = value): Invalid 'row.names' length
by
ussarizona
▴ 10
Hi Michael, Yes, I could figure it out what does the error mean. In my matrix I had the first colum GeneID while in my condition I only h…
Answer: Deseq2. decontXcounts not integers. Useful alternative?
by
Michael Love
41k
Another option would be to put the per sample estimated contamination in the design. This is for example how RUV etc help remove spurious D…
Votes
Answer: Math expression in shapeCustom legend in EnhancedVolcano
Comment: DESeq2 Error in `.rowNamesDF<-`(x, value = value): Invalid 'row.names' length
Comment: Deseq2. decontXcounts not integers. Useful alternative?
Comment: Opposite sign of LFC in count plots of DEGs (DESeq2)
biomaRt error: database disk image is malformed
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