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News: List of Deprecated Packages for Bioc3.8
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7.3 years ago shepherl 4.2k
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4
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Why SPADE package has been removed from bioconductor?
spade release remove clustering
updated 7.3 years ago by 68k • written 7.3 years ago by • 0
7
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4
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News: Bioconductor 3.7 is released
bioconductor release News
written 7.4 years ago by ★ 6.8k
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3
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PureCN Release Notes
PureCN Release
updated 7.4 years ago by 68k • written 7.4 years ago by ▴ 10
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News: DEADLINE: commits to Bioc 3.7
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7.4 years ago shepherl 4.2k
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News: DEADLINE: All packages to pass R CMD build and R CMD check
release software experimentdata workflows News
7.4 years ago shepherl 4.2k
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2
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News: Final List of Deprecated Packages for Bioc3.7
deprecate package release News
written 7.5 years ago by 4.2k
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1.1k
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News: Ensembl 92 has been released
biomart ensembl release ensembl92 News
7.4 years ago Thomas Maurel ▴ 800
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1.2k
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News: Release Deadline: Passing R CMD build and R CMD check
package build build/check error check release News
7.5 years ago shepherl 4.2k
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News: Bioconductor New Package Submission Deadline Today!
new submission release News
7.5 years ago shepherl 4.2k
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1.0k
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News: Bioconductor 3.7 release schedule
bioconductor news release News
7.5 years ago Valerie Obenchain ★ 6.8k
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1.2k
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News: List of Deprecated Packages for Bioc3.7
package updates deprecate release News
7.5 years ago shepherl 4.2k
2
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1.8k
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News: Ensembl 91 is out!
ensembl biomart release ensembl91 News
7.8 years ago amonida ▴ 20
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1.7k
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News: Dockers have been updated for Bioc3.6 and Bioc3.7
docker bioconductor release devel News
7.9 years ago shepherl 4.2k
5
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News: Bioconductor 3.6 is released
bioconductor news release News
7.9 years ago Valerie Obenchain ★ 6.8k
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2
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1.3k
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News: Bioconductor 3.6 release: 3.6 branch created
bioconductor release News
7.9 years ago Valerie Obenchain ★ 6.8k
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News: Bioconductor 3.6 release: stop commits to git.bioconductor.org
bioconductor release News
7.9 years ago Valerie Obenchain ★ 6.8k
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0
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1.1k
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News: Bioconductor 3.6 release: new package deadline
package submission bioconductor release News
8.0 years ago shepherl 4.2k
0
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0
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1.3k
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News: Final List of Deprecated Packages for Bioc3.6
bioconductor release deprecate News
8.0 years ago shepherl 4.2k
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0
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1.0k
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News: Deadline for Packages and Data Bioc3.6
release package submission News
8.0 years ago shepherl 4.2k
0
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0
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1.0k
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News: Bioconductor 3.6 release
bioconductor news release News
8.0 years ago Valerie Obenchain ★ 6.8k
1
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News: Ensembl 90 has been released
ensembl biomart ensembl90 release News
8.1 years ago Thomas Maurel ▴ 800
8
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3.2k
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News: Bioconductor 3.5 is released
bioconductor news release News
updated 8.4 years ago by 16k • written 8.4 years ago by ★ 6.8k
3
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1.4k
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News: Bioconductor 3.5 release
Bioconductor release news News
8.5 years ago Valerie Obenchain ★ 6.8k
6
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0
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2.2k
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News: Bioconductor 3.4 is released
news announcement release News
8.9 years ago Hervé Pagès 16k
3
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0
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1.3k
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News: Bioconductor 3.3 is released
release announcement News
9.4 years ago Dan Tenenbaum ★ 8.2k
3
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9
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3.1k
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Bioconductor docker tags and release versions
docker release
10.3 years ago • updated 9.9 years ago Karl Forner ▴ 70
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News: Bioconductor 3.1 is released!
release News
10.4 years ago Dan Tenenbaum ★ 8.2k
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0
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1.9k
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News: Ensembl GRCh37 release 79 data update
biomart ensembl release news GRCh37 News
10.5 years ago Thomas Maurel ▴ 800
3
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3
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1.9k
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Using a single R installation with multiple BioConductor library installations - opinions & best practices sought
version release library
updated 10.5 years ago by ▴ 400 • written 10.5 years ago by ★ 1.6k
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5
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News: Ensembl 79 release is out!
Ensembl biomart release news News
updated 10.5 years ago by ★ 8.2k • written 10.5 years ago by ▴ 20
131 results • Page 3 of 3
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Comment: readDNAStringSet with non DNA characters by biomiha ▴ 20
DECIPHER does the trick, thank you!
Comment: Guidance on limma for pseudobulk scRNA-seq with multi-factor design by James W. MacDonald 68k
It may not be that common for bulk RNA-Seq, but in my experience it's very common for bulk miRNA-Seq.
Comment: Guidance on limma for pseudobulk scRNA-seq with multi-factor design by abaed • 0
Nice. That's great to hear. `sva` was actually the next step I was planning to try. My colleagues haven't seen this kind of pattern before …
Comment: Guidance on limma for pseudobulk scRNA-seq with multi-factor design by James W. MacDonald 68k
It is not uncommon for library size to be apparent in an MDS plot. You can use `sva` or `RUV` to account for that.
Comment: p-adjusted values in multiple comparisons by Josh • 0
Yes, using lmFit with block and duplicateCorrelation is appropriate; mobile data collection can illustrate blocking importance. First estim…
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Comment: readDNAStringSet with non DNA characters
Comment: Guidance on limma for pseudobulk scRNA-seq with multi-factor design
Answer: Guidance on limma for pseudobulk scRNA-seq with multi-factor design
Answer: Guidance on limma for pseudobulk scRNA-seq with multi-factor design
Comment: Guidance on limma for pseudobulk scRNA-seq with multi-factor design
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