Bioconductor Forum

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updated 22 months ago by konstantinernst • 0 • written 12.2 years ago by jay kumar ▴ 10

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deseq2

updated 9.8 years ago by Steve Lianoglou ★ 13k • written 9.8 years ago by john ▴ 130

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deseq deseq2

updated 3.2 years ago by Michael Love 43k • written 10.2 years ago by francesca.defilippis ▴ 100

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fdr qvalue

updated 8.3 years ago by Gordon Smyth 52k • written 12.1 years ago by Jack Luo ▴ 440

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deseq2 lowcount

updated 12 months ago by Xiao • 0 • written 9.9 years ago by aristotele_m ▴ 40

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rnaseq batch effect deseq2 combat removebatcheffect()

updated 8.6 years ago by adam • 0 • written 9.1 years ago by AB ▴ 110

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updated 12.6 years ago by Thomas Girke ★ 1.7k • written 12.6 years ago by Alyaa Mahmoud ▴ 440

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8

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deseq2 coldata

updated 6.2 years ago by swbarnes2 ★ 1.4k • written 6.2 years ago by mjrarcher ▴ 10

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rnaseq differential gene expression logfc limma R

updated 2.6 years ago by OE • 0 • written 7.5 years ago by cms72 ▴ 20

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plotPCA deseq2 labels

updated 8.1 years ago by Federico Marini ▴ 180 • written 8.1 years ago by al-ash ▴ 50

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SingleR

written 16 months ago by saeed.khalili • 0

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R TPM

updated 7.5 years ago by Gordon Smyth 52k • written 7.5 years ago by cahidora ▴ 100

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edgeR edgeR

11.1 years ago Jiantao Yu ▴ 10

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deseq2 r

updated 2.8 years ago by Hongwei ▴ 20 • written 8.0 years ago by tombernardryan ▴ 60

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updated 10.4 years ago by Andrzej Oleś ▴ 750 • written 10.4 years ago by Guest User ★ 13k

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updated 13.0 years ago by Sunny Yu Liu ▴ 80 • written 13.0 years ago by wang peter ★ 2.0k

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Microarray limma

20.3 years ago • updated 4.3 years ago Gordon Smyth 52k

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limma

written 11.2 years ago by Jon Bråte ▴ 260

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rnaseq annotationdbi

updated 8.3 years ago by Valerie Obenchain ★ 6.8k • written 8.3 years ago by gokce.ouz ▴ 70

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4

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deseq2 metagenomics

updated 4.4 years ago by Ram ▴ 220 • written 4.4 years ago by c.e.chong ▴ 10

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deseq2

updated 7 months ago by Michael Love 43k • written 9.0 years ago by ribioinfo ▴ 100

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updated 9.1 years ago by mhahsler ▴ 20 • written 13.6 years ago by Zoha Moztarzadeh ▴ 20

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6

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Bioclite install

9.1 years ago louiseapps2 • 0

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deseq2 edger

updated 9.2 years ago by Gordon Smyth 52k • written 9.2 years ago by tonja.r ▴ 80

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BiocManager

updated 2.8 years ago by James W. MacDonald 67k • written 3.7 years ago by mizzle ▴ 60

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tximportdata

updated 6.6 years ago by Michael Love 43k • written 6.6 years ago by mmokrejs • 0

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deseq2

updated 9.2 years ago by Michael Love 43k • written 9.2 years ago by zpingfeng • 0

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DESeq2 pcaExplorer

updated 3.9 years ago by Michael Love 43k • written 3.9 years ago by vanbelj ▴ 30

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6

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edgeR cpm

updated 6.6 years ago by ftroot1010 ▴ 20 • written 6.8 years ago by jxb.dev ▴ 40

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DESeq2

6.1 years ago capricygcapricyg ▴ 10

17

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4

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edger rnaseq differential expression

updated 9.6 years ago by Aaron Lun ★ 28k • written 9.6 years ago by Pauly Lin ▴ 160

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deseq2 paired samples

updated 11 months ago by Michael Love 43k • written 8.6 years ago by adesrichard ▴ 30

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bioconductor

updated 6.5 years ago by James W. MacDonald 67k • written 6.5 years ago by heremin • 0

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deseq2

updated 2.2 years ago by Jiahua • 0 • written 5.4 years ago by Jonas B. ▴ 40

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5

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Microarray Microarray

updated 12.5 years ago by James W. MacDonald 67k • written 12.5 years ago by Liat Shavit Grievink ▴ 60

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deseq2 design and contrast matrix model matrix

7.9 years ago mrigaya.mehra ▴ 10

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deseq2

6.1 years ago salamandra ▴ 20

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4

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Clustering Clustering

updated 12.3 years ago by Thomas Girke ★ 1.7k • written 12.3 years ago by Guest User ★ 13k

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BiocUpgrade Rstudio Bioconductor R3.2.2

9.2 years ago svlachavas ▴ 840

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7

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deseq2 gsea rnaseq gene espression

updated 5.9 years ago by Michael Love 43k • written 5.9 years ago by bmreilly • 0

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13

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gener rnaseq

updated 22 months ago by Gordon Smyth 52k • written 9.2 years ago by tonja.r ▴ 80

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6

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deseq2

written 6.3 years ago by 183227851 • 0

22

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12

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28k

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deseq2

updated 5.4 years ago by Micheal Stark • 0 • written 7.7 years ago by Michael Love 43k

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3

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deseq2

updated 5.7 years ago by Michael Love 43k • written 5.7 years ago by andrebolerbarros ▴ 20

1

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R rnaseq bam file

updated 6.7 years ago by Gordon Smyth 52k • written 6.7 years ago by Merlin ▴ 10

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deseq2 differential gene expression

updated 7.2 years ago by Gavin Kelly ▴ 690 • written 7.2 years ago by hs.lansdell ▴ 20

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deseq deseq2

updated 18 months ago by Erika • 0 • written 10.0 years ago by c.lieftink@nki.nl ▴ 40

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9

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edgeR edgeR

updated 12.2 years ago by Gordon Smyth 52k • written 12.2 years ago by john herbert ▴ 560

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1

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27k

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lfcShrink contrast design deseq2

updated 5.0 years ago by Michael Love 43k • written 5.0 years ago by Assa Yeroslaviz ★ 1.5k

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17

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27k

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wgcna network analysis network correlation coexpression

updated 4.1 years ago by Lluís Revilla Sancho ▴ 760 • written 8.4 years ago by jol.espinoz ▴ 40