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1.2k
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Rain error: invalid annotation of time points
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22 months ago Felix • 0
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22 months ago thomas • 0
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1
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8
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22 months ago michelafrancesconi8 • 0
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22 months ago • updated 21 months ago Lily Cheang ▴ 10
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22 months ago dl17032000 • 0
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4
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6
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22 months ago James Aiden • 0
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3
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Dispersion estimation step is very slow with latest DESeq2 and glmGamPoi
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22 months ago I-Hsuan Lin ▴ 10
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7
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DEseq2 dispersion plot
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714
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22 months ago Peter Hickey ▴ 760
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3
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2.2k
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Error in GOmeth function of missMethyl when EPICv2 annotation is used
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22 months ago • updated 15 months ago s.malik • 0
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0
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1.1k
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Error: grouping factors must have > 1 sampled level
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updated 22 months ago by 68k • written 22 months ago by • 0
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0
replies
702
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featureCounts unable to assign long reads to one specific isoform
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579
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3
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11
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Strange logFC values in differential methylation site anslysis
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updated 22 months ago by 53k • written 22 months ago by • 0
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2
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6
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1
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917
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error in Matrix function
MatrixQCvis
updated 22 months ago by 68k • written 22 months ago by • 0
0
votes
3
replies
978
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Would I treat surrogate variables as batches?
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1
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0
replies
787
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Could SGSeq utilizes "ts" tag produced from minimap2 other than "XS" tag?
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22 months ago jk ▴ 10
0
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0
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600
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Can I combine collinear variables into a single value
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22 months ago Harrsha • 0
0
votes
1
reply
722
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Changed DESeq2 comparison value but the heatmap is still the same
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updated 22 months ago by 68k • written 22 months ago by • 0
6
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5
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2.4k
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Estimating Cell Counts for EPIC V2 array data
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4
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Further clarification of unbalanced group sizes DESeq2
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22 months ago hmillike • 0
0
votes
0
replies
1.1k
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Error in set(x, j = name, value = value) : Supplied 52 items to be assigned to 55 items of column 'locus'. If you wish to 'recycle' the RHS please…
ASpli
22 months ago vipul14 • 0
0
votes
0
replies
648
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Issue with shiftGAlignmentsList() in ATACseqQC after updating
R ATACseqQC
22 months ago danalvoronov ▴ 10
2
votes
1
reply
1.2k
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clusterProfiler, AnnotationHub, and discrepancies in GO Terms
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updated 22 months ago by 43k • written 22 months ago by • 0
0
votes
1
reply
729
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ExactTest vs QLFTest
edgeR
updated 22 months ago by 53k • written 22 months ago by • 0
0
votes
2
replies
798
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arm64 Update to flowWorkspace (4.14.2)
flowWorkspace
22 months ago rgong1 • 0
0
votes
0
replies
524
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lfcSE
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22 months ago Gordon • 0
0
votes
1
reply
700
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Matrix multiplication error to estimate telomere length
methylclockData minfi methylclock minfidata
updated 22 months ago by 68k • written 22 months ago by • 0
0
votes
3
replies
941
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impute.knn produces different results based on matrix order
impute
updated 22 months ago by 68k • written 22 months ago by • 0
0
votes
1
reply
490
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few significant genes from DESeq2 analysis
DESeq2
updated 22 months ago by 43k • written 22 months ago by • 0
0
votes
3
replies
1.3k
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Differential enrichment analysis
limma Differentialenrichmentanalysis DEP
updated 22 months ago by 53k • written 22 months ago by • 0
1
vote
2
replies
1.8k
views
Impute does not work
impute
22 months ago Laura • 0
2
votes
3
replies
1.1k
views
"could not find function "readTSGE" in package ctsGE" Error occurs when trying to follow ctsGE package instructions.
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22 months ago jbgnielson • 0
0
votes
4
replies
1.1k
views
Interactions in batches of varying size with different number of replicates using limma
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22 months ago mperalc • 0
46,705 results • Page 30 of 935
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Comment: Converting Probe IDs to HGNC symbols by Manav ▴ 10
ah thank u so much
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A great way to communicate such a nice troubleshooting and bug fix hint is to file an issue in github: https://github.com/lzcyzm/Guitar/iss…
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The brainarray annotations are very confusing, as the IDs in the fData look like affymetrix probe IDs. To clarify, the brainarray project m…
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If you have fake replicates, then I think my code answers your question about how to run the edgeR time-course analysis. Regarding tutoria…
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The use case is kinetic model parameterisation. I'm actually a systems biologist not a bioinformatician. (which is why I'm struggling here)…
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Answer: Converting Probe IDs to HGNC symbols
Converting Probe IDs to HGNC symbols
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