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Bioconductor Long-term Contribution Award
Bioc2023
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12 months ago
shepherl
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12 months ago
Maria Doyle
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News:
Bioconductor 3.17 is Released!
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13 months ago
shepherl
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13 months ago
Maria Doyle
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559
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13 months ago • updated 12 months ago
shepherl
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News:
Biological Data Science summer school 11-16 June in Brixen/Bressanone.
csama
13 months ago
Wolfgang Huber
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527
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News:
EuroBioC2023 abstract submission closing soon!
presentation
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community
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13 months ago
Maria Doyle
▴ 70
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518
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13 months ago • updated 12 months ago
shepherl
3.9k
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500
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News:
Bioconductor Release 3.16 Code Freeze
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Bioconductor
13 months ago
shepherl
3.9k
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2
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914
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News:
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Bioconductor
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13 months ago • updated 11 months ago
shepherl
3.9k
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678
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14 months ago
kayla.interdonato
▴ 160
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14 months ago
shepherl
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updated 14 months ago by
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• 0 • written 14 months ago by
shepherl
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14 months ago
Maria Doyle
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529
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Course - R/BIOCONDUCTOR FOR MASS SPECTROMETRY AND PROTEOMICS
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R
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14 months ago
info
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15 months ago
Maria Doyle
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ensembldb
15 months ago
Aleena
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Maria Doyle
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16 months ago
Maria Doyle
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559
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16 months ago
Maria Doyle
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726
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written 17 months ago by
shepherl
3.9k
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519
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Virtual talk “Model Misspecification in Microbiome Studies” by Amy D Willis
MicrobiomeData
Microbiome
17 months ago
Levi Waldron
★ 1.1k
3
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1.0k
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18 months ago
shepherl
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written 18 months ago by
Peter Hickey
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18 months ago
shepherl
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629
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Bioconductor Carpentries instructor training
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18 months ago
Maria Doyle
▴ 70
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579
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Last day to make commits before Release 3.16
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18 months ago
shepherl
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4
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angelaesper43
• 0 • written 19 months ago by
Maria Doyle
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775
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List of Deprecated Packages for Bioc3.16
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19 months ago
shepherl
3.9k
1
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596
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Bioconductor Hacktoberfest meetups!
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19 months ago
Maria Doyle
▴ 70
1
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791
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News:
Ensembl 108 has been released!
biomaRt
ensembldb
ensembl
written 19 months ago by
Louisse
▴ 10
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598
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Bioconductor Code of Conduct Committee Elections 2022
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19 months ago
Laurent Gatto
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735
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New Package Submission Deadline Tomorrow for Bioconductor 3.16
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19 months ago
shepherl
3.9k
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19 months ago • updated 18 months ago
Peter Hickey
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654
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20 months ago
kayla.interdonato
▴ 160
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20 months ago
shepherl
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13
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Laurent Gatto
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22 months ago
Aleena
▴ 30
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706
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Introduction to genomic data analysis with R and Bioconductor in Heidelberg, 12-13 September 2022
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22 months ago
Laurent Gatto
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Translation Hackathon (community event) announcement
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22 months ago
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2.0 years ago
shepherl
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2.0 years ago
shepherl
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2.0 years ago
shepherl
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2.0 years ago
shepherl
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shepherl
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8
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2.1 years ago • updated 2.0 years ago
shepherl
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2.1 years ago
shepherl
3.9k
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2.1 years ago
shepherl
3.9k
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News:
BSgenome package for T2T-CHM13v2.0 assembly and SNPlocs package for dbSNP155
BSgenome
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2.1 years ago
Hervé Pagès
16k
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2.1 years ago
shepherl
3.9k
495 results • Page
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Comment: Ensembl plants at annotationHub?
by
Johannes Rainer
★ 2.0k
You can get the `EnsDb` EnsDb.Taestivum.v112.sqlite (for Ensembl 112/ ensemblgenomes 59) [here](https://www.dropbox.com/sh/msic0luivbldmb7/…
Comment: Errors in chromosome annotation-biomaRt
by
blackwidowzzz
• 0
I recommend using a different dataset specific to your rat genome assembly version 8. You can search for available datasets within Ensembl …
Answer: Errors in chromosome annotation-biomaRt
by
James W. MacDonald
66k
If you are just using HGNC symbols for the lookup, and you are trying to get NCBI IDs, then I wouldn't use `biomaRt` because it's based on …
Comment: Help with ENmix readidat
by
James W. MacDonald
66k
Please don't add to posts from two years ago. Instead make a new post. Also, please read the help page for `readidat`. The only reason to …
Comment: LRT, more than two conditions and pairwise comparisons
by
James W. MacDonald
66k
In that case, probably easiest to subset to the groups being compared.
Votes
Answer: Error retrieving ensembl gene id using biomaRt...
Comment: LRT, more than two conditions and pairwise comparisons
Answer: Control group between 2 batches have different expression in RNAseq data
Answer: How to remove batch effect to combine RNAseq data from 2 different experiments?
Comment: DESeq2- Mysterious interaction suppresses DEGs
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