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145
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9 weeks ago jean-christophe.helbling • 0
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Could SGSeq utilizes "ts" tag produced from minimap2 other than "XS" tag?
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11 weeks ago jk • 0
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9 days ago neilzhao ▴ 30
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3
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Postdoc
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3 months ago sameerahmadguru • 0
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updated 10 months ago by ▴ 150 • written 10 months ago by ▴ 30
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6
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Looking for documentation about the use of "split = .sign" in enrichplot's dotplot
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3 months ago • updated 12 weeks ago Tobias • 0
1
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2
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Error running run_app('LFQ')
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updated 10 months ago by ▴ 210 • written 11 months ago by ▴ 10
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10 months ago Jiyuan • 0
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4 months ago WS • 0
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"Counts" in enrichGO
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updated 3 months ago by ▴ 10 • written 3 months ago by • 0
1
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1
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425
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How do I select a subset of genes for functional enrichment(GO/KEGG) analysis from WGCNA results?
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rpk per cell saved in SCE object.
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4 months ago JalapenoCornbread • 0
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updated 4 months ago by ★ 4.0k • written 14 months ago by ▴ 10
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496
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determine if R package or it's dependencies functionality require internet access
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0
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Can I plot values from LINCS level 4?
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11 months ago Alexandre • 0
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WGCNA of two different cohorts study
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How to get Cytogenetic band for muscles gene by using Biomart or other tools in R
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Only positive enrichment score in GSEA
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updated 7 weeks ago by ★ 4.0k • written 8 weeks ago by ▴ 10
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4 months ago larsenlola06 0
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10 weeks ago chris2.a.white • 0
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Can I combine collinear variables into a single value
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0
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6 months ago mch • 0
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0
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7 months ago Florian • 0
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updated 5 months ago by ★ 4.0k • written 5 months ago by • 0
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11 weeks ago mperalc • 0
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Try to understand better how to set out an effective sample size within the MetagenomSeq package in microbiome ?
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9 months ago Mohamed ▴ 30
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0
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5 weeks ago Stevie Pederson • 0
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6 days ago • updated 5 days ago e1271094 • 0
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16 days ago tholmes • 0
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0
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6 months ago vasily.dobrovolsky • 0
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12 months ago • updated 9 months ago Jonathan ▴ 10
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4 months ago inna.gur • 0
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0
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lfcSE
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11 weeks ago Gordon • 0
0
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1
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255
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Conversion of .sf to .rgel format for the salmon processed files with transcript to gene mapping.
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updated 4 months ago by ★ 4.1k • written 4 months ago by • 0
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Errror in running EdgeR based differential analysis in diffbind
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4 months ago Aswathy • 0
0
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2
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DESeq2: how could the lower mean abundance treatment show a positive and significant LFC?
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7 months ago • updated 6 months ago Roey Angel • 0
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Title in dba.plotProfile
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11 months ago agata17 • 0
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1
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Subsetting cells from a single cell experiment
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Merge 2 accounts, or delete 1 account.
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11 months ago simone.tiberi • 0
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ChAMP pipeline error (champ.import)
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Help with error running DiffBind
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11 months ago Chris ▴ 10
400 results • Page 2 of 8
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Answer: all variables in design formula must be columns in colData (Deseq2) error by ATpoint ★ 4.1k
Your code is poorly readable. Suggest you select and then highlight with markdown using the `10101` button. Generally, colData(dds) must…
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Hi, I'm using Ensembl Plants release 59 with the IWGSC RefSeq v1.1 gene annotation. Thanks a lot for replying so quickly!
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