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Bioconductor
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Error while installing BiocManager::install("org.Vdahliae.eg.db")
org.vdahlaie.eg.db
Bioconductor
2 days ago • updated 13 hours ago
Patadù
▴ 10
1
vote
0
replies
318
views
News:
Last Call: Nominations for Bioconductor Awards 2024! Deadline May 15
Recognition
Awards
Bioconductor
Bioc204
8 weeks ago • updated 3 days ago
shepherl
3.9k
1
vote
5
replies
514
views
Can't post a question containing code?
Bioconductor
updated 7 days ago by
NATASHA
• 0 • written 3 months ago by
DS
▴ 10
0
votes
1
reply
102
views
Recovering my account credentials on Bioconductor
Bioconductor
updated 10 days ago by
shepherl
3.9k • written 10 days ago by
cyril.dalmasso
• 0
4
votes
0
replies
134
views
News:
Bioconductor 3.19 is Released!
Release
Bioconductor
Packages
Software
16 days ago
shepherl
3.9k
0
votes
0
replies
93
views
News:
BioC2024 deadlines approaching
BioC2024
Bioconductor
Community
17 days ago
Maria Doyle
▴ 70
0
votes
18
replies
2.6k
views
problem installing ENmix package
ENmix
Bioconductor
rtracklayer
written 3.2 years ago by
lea
• 0
0
votes
2
replies
817
views
Job:
Bioinformatics Laboratory Head in AI or machine learning (WEHI, Australia)
bioconductor
artificialintelligence
JobPosting
machinelearning
written 8 months ago by
Gordon Smyth
50k
1
vote
0
replies
346
views
Tutorial:
Installing/switching between versions of R/Rstudio/Bioconductor on personal machine (Linux | Ubuntu)
bioconductor
Install
28 days ago
BioinfGuru
▴ 30
0
votes
2
replies
928
views
Problem for loading Bioconductor package in R
Bioconductor
written 4.3 years ago by
araaaju
• 0
3
votes
18
replies
3.0k
views
News:
List of Deprecated Packages for Bioc3.18
Deprecation
devel
Bioconductor
Devel
10 months ago • updated 4 weeks ago
shepherl
3.9k
0
votes
0
replies
101
views
News:
Important Release 3.18 Freeze Announcment
Release
release
Bioconductor
Bioconducto
5 weeks ago
shepherl
3.9k
0
votes
7
replies
435
views
Internet connection for Bioconductor packages in Rstudio in Iran...
No_internet_connection_Packages
Proxy
Bioconductor
GEOquery
Internet_connection_problem
6 weeks ago
needNGS
• 0
0
votes
2
replies
188
views
bioconductor emailing list
Bioconductor
updated 7 weeks ago by
shepherl
3.9k • written 7 weeks ago by
1427972815
• 0
0
votes
0
replies
163
views
News:
Deadline Extended - BioC2024 Abstracts and Sticker Contest - April 1st!
BioC2024
Conference
Bioconductor
8 weeks ago
Maria Doyle
▴ 70
0
votes
5
replies
9.3k
views
tximport all(file.exists(files)) is not TRUE
bioconductor
tximport
rnaseq
R
updated 8 weeks ago by
Eva
• 0 • written 7.6 years ago by
ctl
• 0
0
votes
1
reply
327
views
News:
BioC2024 abstract submission is open!
BioC2024
Conference
Bioconductor
updated 8 weeks ago by
howell
• 0 • written 12 weeks ago by
Maria Doyle
▴ 70
1
vote
2
replies
277
views
supportedOrganisms() in goseq producing Error in names(trackIds)
goseq
Bioconductor
rtracklayer
10 weeks ago
thomas
• 0
1
vote
0
replies
290
views
News:
Nominations for Bioconductor Awards 2024!
Recognition
Awards
Bioconductor
Bioc2024
12 weeks ago • updated 10 weeks ago
shepherl
3.9k
0
votes
0
replies
196
views
News:
BioC2024 registration is now open!
BioC2024
Conference
Bioconductor
Community
11 weeks ago
Maria Doyle
▴ 70
2
votes
5
replies
1.4k
views
edgeR Help: Getting no DGEs with an FDR < 0.05
edgeR
RNASeq
RNASeqData
Bioconductor
written 14 months ago by
Rebekah
• 0
6
votes
11
replies
1.1k
views
Packages don't update, but no error or warning is thrown
Bioconductor
3 months ago
gernophil
• 0
0
votes
0
replies
191
views
News:
EuroBioC2024 abstract submission is open!
Conference
Bioconductor
EuroBioC2024
3 months ago
Maria Doyle
▴ 70
2
votes
0
replies
255
views
News:
Upholding our core values: a reminder of the Bioconductor Code of Conduct
Bioconductor
3 months ago
Maria Doyle
▴ 70
2
votes
4
replies
3.8k
views
How to convert large gene counts data into matrix?
R
Bioconductor
singlecell
bioinformatics
seurat
updated 3 months ago by
Gordon Smyth
50k • written 4.8 years ago by
sambunga094
• 0
0
votes
1
reply
261
views
Bioconductor: Won't Update to 3.18 with Default Command
Bioconductor
updated 3 months ago by
Lluís Revilla Sancho
▴ 730 • written 3 months ago by
vanbelj
▴ 30
2
votes
11
replies
967
views
Error MakeOrgPackagefromNCBI
Bioconductor
updated 3 months ago by
Guido Hooiveld
★ 4.0k • written 7 months ago by
cinzia.spagnoli
• 0
0
votes
1
reply
216
views
Limitation on single file size and package size when developing Bioc package
packagedevelopment
datalimit
Bioconductor
updated 3 months ago by
Hervé Pagès
16k • written 3 months ago by
Xin Wang
• 0
3
votes
1
reply
337
views
News:
Bioconductor.org has a new look!
Bioconductor
Website
written 4 months ago by
shepherl
3.9k
2
votes
1
reply
294
views
News:
"Edit" button not working
Bioconductor
Website
SupportSite
updated 3 months ago by
Lori
• 0 • written 4 months ago by
shepherl
3.9k
0
votes
0
replies
272
views
News:
Note about packages submitted for Bioconductor 3.19
Release
Submission
release
Bioconductor
3 months ago
shepherl
3.9k
2
votes
2
replies
331
views
How to contact Bioconductor's test host?
Bioconductor
updated 4 months ago by
Hervé Pagès
16k • written 4 months ago by
Marek Gierlinski
▴ 30
0
votes
4
replies
801
views
Bioconductor installation
Bioconductor
written 4 months ago by
Akhil
• 0
4
votes
3
replies
354
views
Bioconductor code browser time out
Bioconductor
updated 4 months ago by
Mike Smith
★ 6.5k • written 4 months ago by
Marek Gierlinski
▴ 30
0
votes
0
replies
289
views
News:
Online course - FLOW CYTOMETRY DATA ANALYSIS WITH R/BIOCONDUCTOR
Bioconductor
FlowCytometryData
FlowCytometry
4 months ago
info
▴ 10
5
votes
18
replies
7.6k
views
Install DESeq2 problem for macbook pro M1 Max
Bioconductor
Install
DESeq2
updated 4 months ago by
picasa1983
• 0 • written 2.3 years ago by
Victor
• 0
0
votes
2
replies
1.4k
views
Conducting pair-wise comparison in DESeq2?
DESeq2
deseq2
biocondu
Bioconductor
RNASeq
written 15 months ago by
Hussain
• 0
0
votes
3
replies
1.7k
views
Error in library(oligo) : package or namespace load failed for ‘oligoClasses’
R
oligoClasses
Oligoclass
Bioconductor
Oligo
written 3.2 years ago by
tanya
• 0
1
vote
5
replies
2.2k
views
pd.mogene.2.0st Error Installing in R 3.1.2
oligo
microarray
r
bioconductor
written 9.3 years ago by
chandlerjd58
▴ 10
5
votes
1
reply
464
views
News:
Bioconductor 3.18 is Released!
Packages
Bioconductor
Release
Software
written 6 months ago by
shepherl
3.9k
0
votes
0
replies
258
views
Normalising processed Proteomics data in R
Bioconductor
Proteomics
5 months ago
Joshua
• 0
0
votes
8
replies
8.7k
views
Bioconductor version cannot be validated
BiocManager
Bioconductor
updated 5 months ago by
Marcel Ramos
700 • written 2.8 years ago by
charlotte
▴ 10
0
votes
6
replies
2.2k
views
Error when Installing BioConductor Package ('affy')
Bioconductor
Install
affy
updated 6 months ago by
ATpoint
★ 4.1k • written 17 months ago by
laujihen
• 0
1
vote
1
reply
1.1k
views
News:
Nominations for Bioconductor 2022 Awards!
Bioc2022
Awards
Bioconductor
Recognition
written 2.2 years ago by
shepherl
3.9k
2
votes
0
replies
499
views
News:
Bioconductor's Transition Away from Twitter/X
Bioconductor
6 months ago
Maria Doyle
▴ 70
0
votes
0
replies
310
views
News:
CRAN downtime
BiocManager
Bioconductor
6 months ago
shepherl
3.9k
2
votes
4
replies
659
views
Import a Bioconductor package that is only used in a vignette/.Rmd script
Bioconductor
PackageType
BiocStyle
updated 6 months ago by
shepherl
3.9k • written 6 months ago by
lavanilla44
• 0
0
votes
3
replies
581
views
Support for installation and usage of TxDb.Hsapiens.UCSC.hg19.knownGene package in R version 4.2.2
Bioconductor
BiocPkgTools
6 months ago
blessybo
• 0
0
votes
2
replies
1.1k
views
Bioconductor version cannot be validated
Bioconductor
updated 6 months ago by
Manuel
• 0 • written 8 months ago by
xlu.cpu
• 0
0
votes
1
reply
356
views
Advice needed on package using online databases (fails CHECK when database is down)
Bioconductor
updated 6 months ago by
shepherl
3.9k • written 6 months ago by
Marek Gierlinski
▴ 30
50 results • Page
1 of 1
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Comment: DESeq2- Mysterious interaction suppresses DEGs
by
shaunpeterson
• 0
The images I tried to attach didn't attach. Here is the PCA (MDS) of all the samples, with the Cortex outlier highlighed. ![enter image de…
Comment: STRINGdb : error with string_db$plot_network()
by
damian.szk
▴ 80
ok. Forcing non-secure protocol should not be needed anymore, due to changes in the underlying library. However, I will look at why "HTTP" …
Comment: STRINGdb : error with string_db$plot_network()
by
ninidea
• 0
> Does the vignette produce the same error? No. Anyway, I finally solved the problem. I don't know why, but I removed: protocol='http' fr…
Comment: maSigPro genes from clusters
by
anne-laure
• 0
Hello It is a litlle bit late but I do not get how to extract the genes from each cluster identified by see.genes(sigs$sig.genes$Day4vs…
Comment: STRINGdb : error with string_db$plot_network()
by
damian.szk
▴ 80
Your code seems ok. Does the vignette produce the same error? [link to STRINGdb R script vignette][1] [1]: https://www.bioconductor.or…
Votes
Answer: Error while installing BiocManager::install("org.Vdahliae.eg.db")
Comment: How can I create a eigencorplot of pca created from deseq2 object with PCAtools
Answer: Importing a GraphNEL into Cytoscape with RCy3 with error: "Error in cyrestPUT(pa
Answer: Importing a GraphNEL into Cytoscape with RCy3 with error: "Error in cyrestPUT(pa
Rsubread counting peaks ATACseq
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