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Lucy
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Replies
Comment: How to visualize these pathways using pathview
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★
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FYI: a similar, if not identical issue has been reported before (`pathview` has problems visualizing some pathways, but not all). You likel…
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I see. Thank you ATpoint!
Comment: how should I apply "cpg.annotate" to TCGA methylation data in hg38 for HM450K?
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Thanks James!
Comment: Why select top highly expressed genes based on normalized counts, but then plot
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I think I explained what the differences between approach 1 and 2 is in my answer. I assume that the tutorial uses vst because it is varian…
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Thank you ATpoint for your responses.
I am a bit confused because the difference between the two approaches is the selection of the genes…
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