Bioconductor Data

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990

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HELP Data

updated 3.1 years ago by Guido Hooiveld ★ 4.1k • written 3.1 years ago by mcclurejenniferc • 0

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819

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BAM Segmentation CINdex VCF Data

3.2 years ago raven1306 • 0

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3.2k

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ExpressionSet Assay NanoString Error Data

updated 3.2 years ago by James W. MacDonald 68k • written 3.2 years ago by junli1988 • 0

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854

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Cytometry R Data

3.3 years ago hamiltond ▴ 10

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1.4k

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data immunology software vaccinology

4.1 years ago Daniel • 0

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1.6k

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TCGAbiolinks data normalize l

updated 4.2 years ago by Kevin Blighe ★ 4.0k • written 4.2 years ago by DANIELA • 0

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2.6k

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data package submission BiocCheck

6.2 years ago j.flesch ▴ 10

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1.3k

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package data

7.1 years ago divyswar01 • 0

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920

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cellGrowth data

7.5 years ago muitalegal888 • 0

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1.6k

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omiccircos bug hg19 hg18 data

8.4 years ago matthew.bashton • 0

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1.5k

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transform flow cytometry data

updated 8.8 years ago by SamGG ▴ 360 • written 8.8 years ago by cr • 0

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1.7k

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rna-seq data

updated 8.8 years ago by Gordon Smyth 53k • written 8.8 years ago by bioinformatics ▴ 20

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1.9k

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edger data analysis

10.3 years ago Pau Marc Muñoz Torres ▴ 20

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1.6k

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data

10.4 years ago Bogdan ▴ 670

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4.2k

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biseq fdr data results

10.5 years ago • updated 10.4 years ago mnaymik ▴ 10

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2.5k

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flowCore flowjo data

updated 10.9 years ago by Greg Finak ▴ 150 • written 10.9 years ago by AJC ▴ 10

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3.5k

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limma export log2 data agilent

updated 11.0 years ago by James W. MacDonald 68k • written 11.0 years ago by Jahn Davik ▴ 110

17 results • Page 1 of 1

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Comment: Help with defining groups by Phinney, Brett ▴ 10

I got it working , thank you!!!

Comment: Check removeBatchEffect effectiveness by massimo • 0

I would kindly ask for additional support. When not including the design_timepoint argument in removeBatchEffect and thus keeping the inter…

Comment: Error Loading Experiment from SimBenchData Package by ksankaran • 0

Aha, that was it! The object was class Seurat, but I didn't have it installed. After installing, everything works as expected.

Comment: Streamlining the computing time for MiloDE p-value correction in large dataset? by ATpoint ★ 5.0k

Is a method that is so computationally expensive really beneficial and necessary? You seem to have biological replication, don't you, so ps…

Answer: NA values for DESeq2 p-values and adjusted p-values using large sample sizes by ATpoint ★ 5.0k

Outliers without replacement, independent filtering or all-zero counts for that gene. That's the three options that trigger NAs https://bio…

Votes

Comment: Check removeBatchEffect effectiveness

Gene expression associated with continuous (quantitative) traits (Limma/edgeR/correlation)

Answer: Error Loading Experiment from SimBenchData Package

Comment: incomplete imputation of missing values with LEA impute() function

Answer: Expected memory usage for analyzing large single-cell seq datasets (> 450,000 ce

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