Showing : Error • reset
4
votes
9
replies
1.3k
views
biomaRt - getBM; Error with obtaining a dataset from getBM() function
biomaRt error getBM
updated 8 weeks ago by ★ 5.0k • written 5 months ago by ▴ 20
0
votes
3
replies
180
views
bioconductor.org not reachable from EU region
error http429 server
3 months ago ashu.upadhyay2206 • 0
0
votes
2
replies
139
views
Finding the correct version of DESeq2 for my version of R (3.6.1)
error DESeq2 Install
updated 4 months ago by 57k • written 4 months ago by • 0
1
vote
2
replies
663
views
error in DESeq2 results(dds)
DESeq2 datasetfrommatrix results error
5 months ago james • 0
2
votes
4
replies
447
views
R Error: package ‘GenomeInfoDb’ could not be loaded on MacBook
error mac DESeq2 GenomeInfoDb R
6 months ago • updated 5 months ago Dan ▴ 10
1
vote
1
reply
194
views
Errors in installing RforProteomics package
error RforProteomics Install
updated 8 months ago by ★ 5.0k • written 8 months ago by • 0
0
votes
1
reply
149
views
testClusters and trimClusters error in BiSeq
BiSeq testClusters error dmr
13 months ago • updated 12 months ago akhaira • 0
6
votes
6
replies
298
views
Suggestion for next revision of edgeR User Guide re Design matrix setup
edger error
updated 14 months ago by 43k • written 14 months ago by • 0
0
votes
14
replies
366
views
annFUN error TOPGO
TOPGO annFUN error
updated 15 months ago by 3.2k • written 15 months ago by • 0
0
votes
0
replies
89
views
Error on FindOptimalBinning function
bhc error
16 months ago pavel.granalacant • 0
0
votes
0
replies
92
views
Multicollinearity and pR2Y =0.1
opls-da error multicollinearity
18 months ago adriana.roca-fernandez • 0
0
votes
1
reply
312
views
boxplot Error in Bioconductor
boxplot bioconductor R error
19 months ago l154359 • 0
0
votes
4
replies
254
views
nucleR ERROR unable to find an inherited method for function peakDetection for signature
nucleosome peaks error Job
updated 19 months ago by 57k • written 19 months ago by • 0
0
votes
5
replies
313
views
readTranscriptFeatures from genomation
R Rstudio Error readTranscriptFeatures genomation
updated 20 months ago by ▴ 20 • written 20 months ago by • 0
0
votes
3
replies
224
views
Error in E-Eb Limma package
limma error E-Eb
updated 21 months ago by 43k • written 21 months ago by • 0
4
votes
7
replies
351
views
bam files to hilbert curve
HilbertCurve error bamfiles GRobject
22 months ago adklts • 0
0
votes
6
replies
3.2k
views
Rhtslib - install error
Rhtslib installation error zlib
updated 22 months ago by • 0 • written 2.8 years ago by • 0
0
votes
1
reply
324
views
DiffBind dba error
DiffBind dba R error
updated 23 months ago by ★ 4.0k • written 2.1 years ago by • 0
0
votes
1
reply
426
views
Help with installation of readat package
readat error
updated 24 months ago by 2.8k • written 24 months ago by • 0
2
votes
2
replies
536
views
TCGAbiolinks GDCprepare error
TCGAbiolinks GDCprepare error
updated 2.1 years ago by ▴ 150 • written 2.1 years ago by ▴ 10
0
votes
1
reply
446
views
R: oligo packages install error
oligo packages error
updated 2.1 years ago by 25k • written 2.1 years ago by • 0
0
votes
0
replies
263
views
Error in parseGenBank
genbankr parseGenBank gbk error
2.1 years ago ashley.dederich • 0
2
votes
3
replies
356
views
How can I overcome the error of "No residual degrees of freedom in linear model fits"?
limma microarray error
updated 2.1 years ago by ★ 1.5k • written 2.1 years ago by ▴ 70
0
votes
6
replies
971
views
Error in getOneSeqFromBSgenomeMultipleSequences During singeR tutorial
error
2.1 years ago dfcarril • 0
0
votes
4
replies
680
views
DESeq2 compare all_vs_all levels error
deseq2 error RNAseq
updated 2.1 years ago by ▴ 800 • written 2.1 years ago by ▴ 20
0
votes
3
replies
224
views
Error in if (all(x <= minReadCount) & lambda <= minReadCount) { : missing value where TRUE/FALSE needed
cnmops cn.mops error
updated 2.1 years ago by 25k • written 2.1 years ago by • 0
0
votes
6
replies
782
views
atacseqQC error while splittin the bamfile
ATACseqQC ATAC-seq error split bam file
updated 2.2 years ago by • 0 • written 2.2 years ago by • 0
0
votes
8
replies
633
views
tximport command error
tx2gene txi error
updated 2.2 years ago by 57k • written 2.2 years ago by • 0
2
votes
6
replies
386
views
EdgeR glmTreat error
edger error
updated 2.3 years ago by 57k • written 2.3 years ago by • 0
1
vote
1
reply
511
views
The query to the BioMart webservice returned an invalid result: biomaRt expected a character string of length 1
biomaRt error
updated 2.3 years ago by 57k • written 2.3 years ago by ▴ 10
0
votes
1
reply
299
views
Error in intramodularConnectivity(ADJ1, colorh1) : object 'colorh1' not found
error wgcna affymetrix data
updated 2.3 years ago by ★ 2.6k • written 2.3 years ago by • 0
2
votes
6
replies
615
views
featurecounts Rsubread ERROR on exon_id
R error software error Rsubread featurecounts
updated 2.3 years ago by ★ 3.3k • written 2.3 years ago by • 0
2
votes
3
replies
2.0k
views
DESeq2- preliminary study no replicates
deseq2 replicates error DESeqDataSetFromMatrix
updated 2.3 years ago by 33k • written 2.3 years ago by • 0
1
vote
1
reply
303
views
Error in getBM(c("affy_rice", "ensembl_gene_id", "entrezgene", "external_gene_name"), : could not find function "featureNames"
annotation error biomaRT affy ricedataset
updated 2.3 years ago by ★ 5.0k • written 2.3 years ago by • 0
1
vote
2
replies
683
views
Errors installing mzR package
proteomics error
updated 2.4 years ago by 1.5k • written 2.4 years ago by • 0
2
votes
5
replies
1.2k
views
GDCdownload does not work
GDCdow tcgabiolinks error tcgadownload download_error
updated 2.6 years ago by ▴ 260 • written 2.6 years ago by • 0
0
votes
1
reply
327
views
Linking PhosMap to issue number: 953
error github package contribution
updated 2.6 years ago by 25k • written 2.6 years ago by • 0
0
votes
2
replies
461
views
Biostrings: revComp error: Not compatible with STRSXP
biostrings Error Not compatible with STRSXP
2.6 years ago camille.4nier • 0
0
votes
1
reply
546
views
Conda Env & biocLite("affyio") : < undefined symbol: gzclose >
Conda affyio error
2.8 years ago benjamin.saintpierre • 0
0
votes
6
replies
537
views
DEsubs - Error in read.table during DEsubs command
DEsubs error
updated 2.9 years ago by • 0 • written 2.9 years ago by ▴ 10
0
votes
2
replies
588
views
Error in saving diffmeth data
error
3.0 years ago kjfilipski • 0
1
vote
5
replies
641
views
How do I stop DESeq2 from loading and additional errors related to the package.
r deseq2 error
updated 3.1 years ago by ▴ 980 • written 3.1 years ago by • 0
0
votes
0
replies
316
views
Error while extracting pseudo amino acid composition using protr
r source code error
3.1 years ago shreyasarkar0 • 0
5
votes
7
replies
1.9k
views
Gage package; go.gset() function error: argument "go_id" is missing
gage package error
updated 3.2 years ago by 57k • written 3.2 years ago by ▴ 20
0
votes
1
reply
473
views
Error: 'unknown input format' while trying http://bioconductor.org/packages/3.7/bioc
error oligo affy
3.2 years ago kritikamish99 ▴ 10
0
votes
1
reply
593
views
[metagenomeSeq] "Error: Warning sample with one or zero features" from cumNormStatFast
metagenomeseq cumNormStatFast features error
3.2 years ago jol.espinoz ▴ 40
1
vote
1
reply
405
views
Installing DESeq2 error: missing value where TRUE/FALSE needed
deseq2 error biocinstaller
updated 3.2 years ago by 25k • written 3.2 years ago by ▴ 10
3
votes
2
replies
955
views
Unable to install a Bioconductor package to local directory
error biocinstaller
updated 3.2 years ago by 57k • written 3.2 years ago by • 0
0
votes
3
replies
1.3k
views
Error when constructing DESeqDataSetFromMatrix (Error in round(assay(se)): non-numeric argument to mathematical function)
deseq2 R error
updated 3.4 years ago by 33k • written 3.4 years ago by • 0
0
votes
3
replies
1.1k
views
incorrect biomaRt output order of gene list
biomart ensembldb error
3.4 years ago Yuqia • 0
50 results • Page 1 of 1
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Comment: An error using Diffbind plotprofile by doug.barrows • 0
Hi there, it's hard to tell how to debug without having the data. Could you potentially send me the object you are attempting to use for th…
Comment: DESeq2 Shrinkage methods for scRNA-Seq by Pedro Tan • 0
Thanks Michael! I will stick to apeglm and incorporate alternate size factors for single cell data. All the best, Pedro
Answer: Macbook M1 install genefilter failed by soda ▴ 10
i have solved this problem by myself. share with you. you need to download gfortran in path /opt/R/arm64/bin this website helped me: **h…
Comment: Best practice for quantifying sncRNA by James W. MacDonald 57k
If you used the QIASeq miRNA library, then you are wasting your time. That library adds the UMI barcodes and is intended for you to then up…
Answer: BioCAsia Virtual Meeting, 15-18 October 2020 by Cassandra Holmes • 0
All the types of bio-conductors are presented to the buyers. The change of the [proposal writing help][1] is ensured for the users. The bio…
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Answer: Macbook M1 install genefilter failed
BioCAsia Virtual Meeting, 15-18 October 2020
Answer: Selecting pairs of exons from differentially spliced genes
Comment: Idea: Using DESeq2 to test a change in ratio of two genes
Time Series Analysis
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