Bioconductor Genome

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430

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ensembldb transcriptome genome coordinateconversion

updated 7 months ago by Michael Love 42k • written 7 months ago by saadmurtazakhan ▴ 10

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823

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build genome

20 months ago • updated 19 months ago Dmitry • 0

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3.0k

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Genome bwamem ChIPSeqData index

updated 20 months ago by ATpoint ★ 4.5k • written 20 months ago by Maka • 0

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1.2k

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Alignment Genome

3.1 years ago • updated 3.0 years ago Charles Plessy ▴ 180

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1.6k

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Genome readVcf VariantAnnotation

3.6 years ago naive • 0

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1.3k

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Genome GWASdata

3.7 years ago Jocelyn • 0

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1.2k

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annotation genome hg38 TxDb.Hsapiens.UCSC.hg38.knownGene BSgenome.Hsapiens.UCSC.hg38

updated 4.7 years ago by kayla.interdonato ▴ 160 • written 4.7 years ago by jam526 • 0

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1.3k

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Gviz R UCSC Tracks genome locusplot

updated 5.0 years ago by Robert Ivanek ▴ 750 • written 5.0 years ago by s.koturan • 0

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1.1k

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single cell bioinformatics genome sequencing Job

5.1 years ago jmaanaki • 0

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2.2k

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annotation gff3 gff genome

updated 5.2 years ago by Michael Lawrence ★ 11k • written 5.2 years ago by mictadlo ▴ 10

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3.0k

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txdb genome exons

updated 5.3 years ago by Martin Morgan 25k • written 5.3 years ago by Bogdan ▴ 670

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995

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single cell genome cancer Job

5.4 years ago jmaanaki • 0

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1.0k

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genome novel package release

updated 5.7 years ago by James W. MacDonald 67k • written 5.8 years ago by pertille • 0

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1.4k

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multiplealignment genome

6.1 years ago Giuseppe ▴ 20

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1.4k

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r build genome chicken-sheme

9.0 years ago pertille • 0

15 results • Page 1 of 1

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Comment: Combining RNAseq and microarray data using edgeR/limma-voom by Adam Marstrand • 0

Hi again, Thank you for the response! Can you expound on why it is not a good idea? I realize that the expression levels/differential expr…

Answer: Combining RNAseq and microarray data using edgeR/limma-voom by James W. MacDonald 67k

No, that's not a good idea at all. You should be doing a meta-analysis with these data rather than trying to combine like that. `GeneMeta` …

Answer: GOstats kegg analysis in wheat - help - none of the objects in the first column by James W. MacDonald 67k

Check the help page for `KEGGFrame`. Your columns are out of order.

Comment: Question about using LRT test for time course experiments with DESeq2 by James W. MacDonald 67k

You are testing the interaction, so you are asking for those genes that change at any time *differently, depending on the treatment*. If co…

Comment: DESeq Input from Salmon + tximport/tximeta by LuciaNhu • 0

Thank you both. Special thanks from Prof. Michael Love. It's rare to find tool authors who respond to users so quickly and supportively. Ma…

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Comment: DESeq Input from Salmon + tximport/tximeta

Answer: DESeq Input from Salmon + tximport/tximeta

Answer: featureCounts segmentation fault with large chromosomes

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Popular Question to Assa Yeroslaviz ★ 1.5k