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News:
Important: Bioconductor Release 3.22 Delayed
release
2 days ago • updated 1 day ago
shepherl
4.2k
0
votes
0
replies
133
views
News:
Bioconductor 3.22 Release Schedule
Devel
Release
Bioconductor
6 weeks ago • updated 27 days ago
shepherl
4.2k
2
votes
0
replies
781
views
News:
Bioconductor 3.21 is Released!
devel
release
Release
Devel
6 months ago
shepherl
4.2k
0
votes
1
reply
715
views
News:
List of Deprecated Packages for Bioc3.20
Release
Devel
Bioconductor
12 months ago • updated 7 months ago
shepherl
4.2k
0
votes
0
replies
352
views
News:
List of Deprecated Packages for Bioc3.21
devel
Release
release
Devel
7 months ago
shepherl
4.2k
0
votes
0
replies
505
views
News:
Bioconductor 3.21 Release Schedule Important Deadlines Approaching
Software
Release
release
7 months ago
shepherl
4.2k
1
vote
0
replies
1.3k
views
News:
Bioconductor 3.20 is Released!
Bioconductor
Release
Software
12 months ago
shepherl
4.2k
0
votes
11
replies
2.4k
views
News:
List of Deprecated Packages for Bioc3.19
Release
Devel
ExperimentData
Software
20 months ago • updated 12 months ago
shepherl
4.2k
3
votes
4
replies
2.6k
views
News:
Bioconductor 3.20 Release Schedule
software
release
Release
updated 5 months ago by
randyprice13102000
• 0 • written 13 months ago by
shepherl
4.2k
4
votes
0
replies
1.4k
views
News:
Bioconductor 3.19 is Released!
Release
Bioconductor
Packages
Software
18 months ago
shepherl
4.2k
0
votes
0
replies
780
views
News:
Important Release 3.18 Freeze Announcment
Release
release
Bioconductor
Bioconducto
18 months ago
shepherl
4.2k
0
votes
1
reply
1.5k
views
News:
Bioconductor 3.19 Release Schedule
Release
release
Software
20 months ago • updated 19 months ago
shepherl
4.2k
0
votes
1
reply
1.2k
views
Rcpp compilation error
Release
Rcpp
updated 20 months ago by
ATpoint
★ 5.0k • written 20 months ago by
Robert K. Bradley
▴ 40
0
votes
0
replies
1.1k
views
News:
Note about packages submitted for Bioconductor 3.19
Release
Submission
release
Bioconductor
21 months ago
shepherl
4.2k
5
votes
1
reply
1.8k
views
News:
Bioconductor 3.18 is Released!
Packages
Bioconductor
Release
Software
written 2.0 years ago by
shepherl
4.2k
1
vote
4
replies
1.1k
views
rnaSeqGene workflow not available in Bioconductor 3.18
rnaseqGene
Bioconductor3.18
DifferentialExpression
release
updated 24 months ago by
Michael Love
43k • written 24 months ago by
Nadine
▴ 60
0
votes
4
replies
2.0k
views
News:
Important Bioconductor Release 3.18 deadlines this week
Release
Devel
release
devel
updated 2.0 years ago by
Guido Hooiveld
★ 4.1k • written 2.0 years ago by
shepherl
4.2k
1
vote
0
replies
1.6k
views
News:
Bioconductor 3.18 db0s, OrgDbs, and TxDbs now available
db0
release
Annotation
2.1 years ago
kayla.interdonato
▴ 160
0
votes
0
replies
1.5k
views
News:
Bioconductor 3.18 Release Schedule
Release
Software
release
2.2 years ago
shepherl
4.2k
1
vote
8
replies
2.0k
views
News:
Final List of Deprecated Package Bioc 3.9
deprecation
release
software
experimentData
News
written 6.6 years ago by
shepherl
4.2k
0
votes
0
replies
1.2k
views
News:
Bioconductor 3.17 is Released!
Packages
Release
Bioconductor
Software
2.5 years ago
shepherl
4.2k
0
votes
0
replies
834
views
News:
Bioconductor Release 3.16 Code Freeze
release
Release
Bioconductor
2.6 years ago
shepherl
4.2k
0
votes
0
replies
1.3k
views
News:
Bioconductor 3.17 db0s, OrgDbs, and TxDbs now available
release
db0
Annotation
2.6 years ago
kayla.interdonato
▴ 160
0
votes
0
replies
1.0k
views
News:
Bioconductor 3.17 Release Schedule
Softwar
Release
Bioconductor
release
Software
2.6 years ago
shepherl
4.2k
1
vote
0
replies
1.3k
views
News:
Bioconductor 3.16 is Released!
Release
Packages
Bioconductor
Software
3.0 years ago
shepherl
4.2k
0
votes
0
replies
914
views
News:
Last day to make commits before Release 3.16
Release
Devel
Bioconductor
release
devel
3.0 years ago
shepherl
4.2k
0
votes
2
replies
1.3k
views
News:
List of Deprecated Packages for Bioc3.16
Release
Deprecation
Devel
Bioconductor
3.0 years ago
shepherl
4.2k
0
votes
0
replies
1.1k
views
News:
New Package Submission Deadline Tomorrow for Bioconductor 3.16
Release
Devel
Bioconductor
Software
3.1 years ago
shepherl
4.2k
0
votes
0
replies
1.3k
views
News:
Bioconductor 3.16 db0s, OrgDbs and TxDbs now available
release
db0
annotation
3.1 years ago
kayla.interdonato
▴ 160
4
votes
0
replies
1.2k
views
News:
Bioconductor Release 3.16 Schedule
Release
Devel
packages
release
devel
3.1 years ago
shepherl
4.2k
8
votes
0
replies
1.3k
views
News:
Bioconductor 3.15 is Released!
Software
Release
Packages
Bioconductor
3.5 years ago
shepherl
4.2k
0
votes
4
replies
1.8k
views
News:
List of Deprecated Packages for Bioc3.15
Devel
Deprecation
Release
Bioconductor
3.6 years ago • updated 3.0 years ago
shepherl
4.2k
0
votes
1
reply
1.5k
views
News:
Bioconductor 3.15 db0s, OrgDbs and TxDbs now available
annotation
release
db0
3.6 years ago • updated 3.5 years ago
kayla.interdonato
▴ 160
0
votes
0
replies
976
views
News:
New Package Submission Deadline Tomorrow for Bioconductor 3.15
Release
Software
Bioconductor
Devel
3.6 years ago
shepherl
4.2k
1
vote
0
replies
1.3k
views
News:
Bioconductor Release 3.15 Schedule
Devel
release
packages
Release
devel
3.6 years ago
shepherl
4.2k
0
votes
5
replies
2.0k
views
News:
Final List of Deprecated Packages for Bioc3.14
ExperimentData
Deprecation
Software
Release
Workflow
4.0 years ago • updated 3.5 years ago
shepherl
4.2k
8
votes
0
replies
1.4k
views
News:
Bioconductor 3.14 is Released!
release
Packages
Software
Release
Bioconductor
4.0 years ago
shepherl
4.2k
0
votes
0
replies
1.2k
views
News:
New Package Submission Deadline for Bioc Release 3.14
newpackage
Deadline
Release
Submission
4.1 years ago
shepherl
4.2k
1
vote
0
replies
1.4k
views
News:
Bioconductor Release 3.14 Schedule
devel
Devel
release
packages
Release
4.1 years ago
shepherl
4.2k
7
votes
6
replies
2.4k
views
How to obtain summary statistics for all Bioc releases
bioconductor
release
7.4 years ago
Robert Ivanek
▴ 750
5
votes
0
replies
1.4k
views
News:
Bioconductor 3.13 is Released!
Release
Bioconductor
Packages
Software
4.4 years ago
shepherl
4.2k
0
votes
0
replies
1.1k
views
News:
Last day to make commit before the RELEASE_3_13
Release
Devel
devel
release
Bioc3.13
4.5 years ago
shepherl
4.2k
0
votes
3
replies
1.6k
views
Bioconductor Release AMI's
Release
release
AWS
AMI
Bioconductor
updated 4.5 years ago by
Vincent J. Carey, Jr.
6.7k • written 4.5 years ago by
shepherl
4.2k
1
vote
0
replies
1.3k
views
News:
Bioconductor 3.13 db0s, OrgDbs and TxDbs now available
annotation
release
db0
4.5 years ago
kayla.interdonato
▴ 160
1
vote
1
reply
1.5k
views
Rsync Access
release
rsync
873
updated 4.5 years ago by
Martin Morgan
25k • written 4.5 years ago by
workmanld
▴ 10
0
votes
1
reply
1.4k
views
News:
Bioconductor 3.13 New Package Submission Deadline
release
Submission
newpackage
Release
Deadline
4.5 years ago
shepherl
4.2k
0
votes
0
replies
1.2k
views
News:
Bioconductor Release 3.12 and Bioconductor Devel 3.13 Code Freeze Deadlines!
Bioconductor
release
devel
deadline
4.5 years ago
shepherl
4.2k
0
votes
0
replies
1.3k
views
News:
Bioconductor Release 3.13 Schedule
release
Release
4.6 years ago • updated 4.5 years ago
shepherl
4.2k
4
votes
0
replies
1.4k
views
News:
Bioconductor 3.12 is Released!
Software
release
Bioconductor
Packages
Release
5.0 years ago
shepherl
4.2k
0
votes
1
reply
1.4k
views
News:
Bioconductor 3.12 db0s, OrgDbs and TxDbs now available
annotation
db0
news
release
News
5.0 years ago
kayla.interdonato
▴ 160
132 results • Page
1 of 3
Recent ...
Replies
Comment: deseq2 filter the low counts
by
Michael Love
43k
Have you seen this part: https://bioconductor.org/packages/release/bioc/vignettes/DESeq2/inst/doc/DESeq2.html#pre-filtering
Comment: deseq2 filter the low counts
by
empty_mt
• 0
Hi Michael, My matrix consists of 36 samples from 6 treatments (6 samples/ treatment), whether I adjust prefiltering parameters or not, in…
Comment: Best practice for handling large data (matrix with >2^31-1 non-zero elements) in
by
dan.gatti
• 0
That works. I didn't realize what you said about HDF5 files. We always keep those and archive the MTX files. I'm able to read in the file…
Comment: DESeq2 interactions
by
Michael Love
43k
GPT even v4 gives pretty good answers to DESeq2 questions that are similar to those already posted on the support site. I've also noticed …
Answer: Important: Bioconductor Release 3.22 Delayed
by
shepherl
4.2k
We will continue with the release on Thursday October 30th. We have shifted one day as originally planned. Thank you
Votes
Answer: DESeq2 interactions
Answer: Important: Bioconductor Release 3.22 Delayed
A: Multi-level experiments in Limma
Answer: Should voomWithQualityWeights still be used when the sample-specific weights var
Answer: DESeq2 for candidate gene analysis
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