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Spam: Is there a way to map Excel fields to VCF contacts for accurate conversion?
ComputationalChemistry Technology Software Website
updated 7 days ago by 4.3k • written 7 days ago by 0
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News: Bioconductor 3.22 Released!
release Release Bioconductor Software
written 10 weeks ago by 4.3k
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668
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News: Bioconductor 3.21 Release Schedule Important Deadlines Approaching
Software Release release
9 months ago shepherl 4.3k
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1.5k
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News: Bioconductor 3.20 is Released!
Bioconductor Release Software
14 months ago shepherl 4.3k
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11
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2.8k
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News: List of Deprecated Packages for Bioc3.19
Release Devel ExperimentData Software
22 months ago • updated 14 months ago shepherl 4.3k
3
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4
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3.1k
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News: Bioconductor 3.20 Release Schedule
software release Release
updated 8 months ago by • 0 • written 16 months ago by 4.3k
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1.6k
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Job: Research software engineer at UPF Barcelona
JobPosting Devel GSVA Software
written 3.1 years ago by ★ 3.4k
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1.7k
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News: Bioconductor 3.19 is Released!
Release Bioconductor Packages Software
20 months ago shepherl 4.3k
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News: Bioconductor 3.19 Release Schedule
Release release Software
22 months ago • updated 21 months ago shepherl 4.3k
5
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1.9k
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News: Bioconductor 3.18 is Released!
Packages Bioconductor Release Software
written 2.2 years ago by 4.3k
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2.4k
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Software Compatibility Issue Between phyloseq and lme4 Packages
phyloseq microbiome Software
updated 2.3 years ago by ★ 5.0k • written 2.3 years ago by ▴ 10
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News: Bioconductor 3.18 Release Schedule
Release Software release
2.4 years ago shepherl 4.3k
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822
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Generate false reads for testing
mgu74bv2cdf Software Alignment
updated 2.6 years ago by 68k • written 2.6 years ago by • 0
1
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8
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2.2k
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News: Final List of Deprecated Package Bioc 3.9
deprecation release software experimentData News
written 6.8 years ago by 4.3k
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1.3k
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News: Bioconductor 3.17 is Released!
Packages Release Bioconductor Software
2.7 years ago shepherl 4.3k
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1.1k
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News: Bioconductor 3.17 Release Schedule
Softwar Release Bioconductor release Software
2.8 years ago shepherl 4.3k
3
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6
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1.9k
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News: Bioconductor will rename the default branch on `git.bioconductor.org` to `devel`
Software Bioconductor Devel devel
updated 2.8 years ago by • 0 • written 2.9 years ago by 4.3k
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1.4k
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News: Bioconductor 3.16 is Released!
Release Packages Bioconductor Software
3.2 years ago shepherl 4.3k
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1.2k
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News: New Package Submission Deadline Tomorrow for Bioconductor 3.16
Release Devel Bioconductor Software
3.3 years ago shepherl 4.3k
8
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1.4k
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News: Bioconductor 3.15 is Released!
Software Release Packages Bioconductor
3.7 years ago shepherl 4.3k
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1.1k
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News: New Package Submission Deadline Tomorrow for Bioconductor 3.15
Release Software Bioconductor Devel
3.8 years ago shepherl 4.3k
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5
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2.1k
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News: Final List of Deprecated Packages for Bioc3.14
ExperimentData Deprecation Software Release Workflow
4.3 years ago • updated 3.7 years ago shepherl 4.3k
8
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1.5k
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News: Bioconductor 3.14 is Released!
release Packages Software Release Bioconductor
4.2 years ago shepherl 4.3k
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0
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1.5k
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Job: Hiring Bioinformaticians, Data Engineers, & Computer Scientists @ Flagship Labs 77
data immunology software vaccinology
4.3 years ago Daniel • 0
5
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0
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1.4k
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News: Bioconductor 3.13 is Released!
Release Bioconductor Packages Software
4.7 years ago • updated 4.6 years ago shepherl 4.3k
2
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2
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2.1k
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News: Final List of Deprecated Packages for Bioc3.13
Workflow Software ExperimentData Deprecation
5.1 years ago • updated 4.7 years ago shepherl 4.3k
4
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0
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1.4k
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News: Bioconductor 3.12 is Released!
Software release Bioconductor Packages Release
5.2 years ago shepherl 4.3k
1
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2
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1.9k
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News: Final List of Deprecated Packages for Bioc3.12
annotation software experimentdata deprecated News
5.3 years ago • updated 5.2 years ago shepherl 4.3k
0
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0
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1.5k
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Job: R programmer position in genetic epidemiology/bioconductor
genetics genomics software Job
5.2 years ago Vincent J. Carey, Jr. 6.7k
2
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4
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1.7k
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Bioconductor package development
package R software development
updated 5.3 years ago by 25k • written 5.3 years ago by • 0
3
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0
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2.0k
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News: List of Deprecated Packages for Bioc3.12
annotation software experiment data deprecated News
5.4 years ago • updated 5.3 years ago shepherl 4.3k
0
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2
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1.3k
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What is Software, Annotationdata, Experimentdata and workflow category?
Software annotation experiment workflow
updated 5.4 years ago by 4.3k • written 5.4 years ago by • 0
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0
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1.4k
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News: List of Deprecated Packages for Bioc3.12
deprecated experiment data software annotation News
5.6 years ago shepherl 4.3k
0
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2
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1.3k
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Problem in dowloading "TxDb.Hsapiens.UCSC.hg38.knownGene"
annotation software TxDb
updated 5.6 years ago by 68k • written 5.6 years ago by • 0
0
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3
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1.7k
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News: Final List of Deprecated Packages for Bioc3.11
software annotation experiment data deprecated News
updated 5.7 years ago by ▴ 160 • written 5.8 years ago by 4.3k
4
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0
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1.2k
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News: Bioconductor 3.11 is Released!
software bioconductor release packages News
5.7 years ago shepherl 4.3k
0
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0
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1.4k
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News: List of Deprecated Packages Bioc 3.11
annotation experimentdata software release deprecation News
5.9 years ago shepherl 4.3k
0
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1
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1.3k
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News: List of Deprecated Packages Bioc 3.11
annotation experimentdata software release deprecation News
6.0 years ago shepherl 4.3k
1
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1
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1.6k
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How to use ENCprime via coRdon with a custom background sequence set?
software codon usage bias dna
updated 6.1 years ago by ▴ 10 • written 6.1 years ago by ▴ 40
0
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0
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1.3k
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News: List of Deprecated Packages Bioc 3.11
annotation experimentdata software release deprecation News
6.2 years ago shepherl 4.3k
0
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2
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2.6k
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News: Final List of Deprecated Packages for Bioc3.10
annotation experimentdata deprecation release software News
6.3 years ago • updated 6.2 years ago shepherl 4.3k
2
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2
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1.5k
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News: Bioconductor Devel 3.11 Notification
software bioconductor packages reports News
6.2 years ago shepherl 4.3k
6
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0
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1.4k
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News: Bioconductor 3.10 is released!!
release software packages bioconductor News
6.2 years ago shepherl 4.3k
0
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0
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1.4k
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News: List of Deprecated Packages Bioc 3.10
annotation experimentdata software release deprecation News
6.4 years ago • updated 6.3 years ago shepherl 4.3k
2
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0
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2.8k
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Job: Bioconductor infrastructure for the integration of genomics, transcriptomics and proteomics data
proteomics genomics transcriptomics software Job
6.3 years ago Laurent Gatto 1.6k
0
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1
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1.5k
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News: List of Deprecated Packages Bioc 3.10
annotation experimentdata software deprecation release News
6.5 years ago • updated 6.4 years ago shepherl 4.3k
0
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0
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1.1k
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Job: Software Developer - BC Cancer Research Center, Vancouver BC
software bioinformatics sequecing Job
6.6 years ago jmaanaki • 0
0
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3
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1.6k
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News: List of Deprecated Packages Bioc 3.10
annotation experimentdata software release deprecation News
6.6 years ago shepherl 4.3k
0
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1
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1.3k
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News: Initial List of Deprecated Packages Bioc 3.10
software experimentdata release deprecation annotation News
6.7 years ago • updated 6.6 years ago shepherl 4.3k
0
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1
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1.7k
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News: List of Deprecated Package Bioc 3.9
deprecate release devel software experimentdata News
6.9 years ago shepherl 4.3k
58 results • Page 1 of 2
Recent ...
Replies
Comment: Joining different datasets and analyzing using the group-specific condition effe by James W. MacDonald 68k
There is an example of how you can do this in the [DESeq vignette][1]. An alternative would be to fit a linear mixed model using the `vari…
Comment: Joining different datasets and analyzing using the group-specific condition effe by jason.chai • 0
@mikelove Could I please ask if a similar method would work my set of samples? I have 255 samples which have been generated from 76 subject…
Comment: Clarification on counting in Rsubread (featureCounts) by Luca • 0
Thanks to both of you for your helpful suggestions. The counting was already strand-specific at both the exon and gene levels. I resolved …
Comment: Clarification on counting in Rsubread (featureCounts) by Gordon Smyth 53k
Have you told featureCounts to do strand-specific counting? As pointed out by Frances Turner, you can lose reads if they overlap the gene …
Answer: Clarification on counting in Rsubread (featureCounts) by Frances Turner ▴ 20
You should look at the summary files produced by feature counts. This gives a breakdown of what happened to reads that were not assigned. Y…
Votes
Answer: Clarification on counting in Rsubread (featureCounts)
Comment: Clarification on counting in Rsubread (featureCounts)
C: ControlGenes/ housekeeping genes Deseq2
Answer: Clarification on counting in Rsubread (featureCounts)
C: RNA-Seq analysis with Limma/edgeR, time course experiment, aberrant results
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Commentator to James W. MacDonald 68k
Great Question to fl ▴ 20
Popular Question to Lluís Revilla Sancho ▴ 760
Popular Question to Gordon Smyth 53k
Popular Question to Aleena_Ensembl ▴ 30
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