Showing : complexheatmap • reset
3
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4
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5.2k
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Analysis of clusters of a heatmap with enrichGO of clusterProfiler: choice fo the categories to visualize
clusterProfiler enrichGO ComplexHeatmap
updated 5 months ago by 68k • written 6 months ago by ▴ 10
0
votes
4
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933
views
Position of the legend object in complexHeatmap
ComplexHeatmap
6 months ago caroline.zanchi ▴ 10
4
votes
4
replies
2.1k
views
Adding gene names as row annotations to an RNAseq heatmap made with ComplexHeatmap
DESeq2 ComplexHeatmap
6 months ago caroline.zanchi ▴ 10
0
votes
3
replies
1.1k
views
Its possible to remove annotation names using anno_simple in ComplexHeatmap
ComplexHeatmap
updated 13 months ago by ▴ 10 • written 14 months ago by • 0
1
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5
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3.2k
views
ComplexHeatmap - alter legend position
ComplexHeatmap
17 months ago Lucy ▴ 60
2
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3
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1.7k
views
ComplexHeatmap: add pch to rowAnnotation when the input is a data frame with variable number of continuous columns
ComplexHeatmap
20 months ago daniel.carbajo • 0
2
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2
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1.4k
views
ComplexHeatmap: change the names of a HeatmapAnnotation object
ComplexHeatmap
20 months ago daniel.carbajo • 0
2
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2
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1.5k
views
ComplexHeatmap crashing R session
ComplexHeatmap
22 months ago Felipe • 0
2
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3
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2.0k
views
How can I draw a barplot of complexheatmap according 'Tumor Type'
heatma heatmaps ComplexHeatmap
updated 2.9 years ago by ▴ 40 • written 2.9 years ago by ▴ 10
3
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4
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5.9k
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ComplexHeatmap - Default distance and hierarchical clustering methods
ComplexHeatmap Complex
updated 2.9 years ago by ▴ 40 • written 2.9 years ago by • 0
2
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5
replies
2.8k
views
ComplexHeatmap - z-score color coding failed
heatmaps ComplexHeatmap
3.0 years ago Katharina • 0
0
votes
1
reply
2.5k
views
Complex Heatmap - correlation matrix - how to have exact same annotation with same colors for rows and columns?
R heatmaps ComplexHeatmap Heatma
updated 3.3 years ago by ▴ 290 • written 3.3 years ago by • 0
0
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0
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1.6k
views
Boxplot annotation per cluster and column using ComplexHeatmap
ComplexHeatmap
3.4 years ago gdeniz • 0
2
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2
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4.2k
views
ComplexHeatmap: Change font size of annotation axis values
ComplexHeatmap
updated 2.4 years ago by • 0 • written 3.5 years ago by ▴ 10
3
votes
3
replies
6.4k
views
ComplexHeatmap install error
ComplexHeatmap
updated 3.5 years ago by 68k • written 3.5 years ago by ▴ 10
2
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3
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4.3k
views
Complexheatmap row-names not showing up
ComplexHeatmap
3.5 years ago chm • 0
1
vote
1
reply
3.4k
views
ComplexHeatmap: Not able to change the annotations size of the heatmap
ComplexHeatmap Anno Annotation
updated 4.3 years ago by ▴ 290 • written 4.3 years ago by ▴ 10
1
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0
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1.7k
views
ComplexHeatmap: Swapping between left_annotation and right_annotation results in a blank space
anno_block ComplexHeatmap left_annotation right_annotation
4.4 years ago glich • 0
2
votes
5
replies
5.7k
views
News: New in DiffBind 3.2: dba.plotProfile() - Peak profiles and profile heatmaps
profileplyr ATACSeq DiffBind ComplexHeatmap ChIPSeq
updated 3.0 years ago by • 0 • written 4.6 years ago by ★ 5.2k
3
votes
2
replies
3.1k
views
Complex Heatmap shows just one color
Heatmap ComplexHeatmap colorRamp
4.7 years ago Assa Yeroslaviz ★ 1.5k
0
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1
reply
4.3k
views
ComplexHeatmap: setting column_order changes plotted values
ComplexHeatmap
4.7 years ago vanbelj ▴ 30
2
votes
4
replies
7.2k
views
Complexheatmap Installation Issue
ComplexHeatmap
4.9 years ago legro.melanie • 0
0
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0
replies
1.0k
views
How to show rownames in densityheatmaps
ComplexHeatmap
5.0 years ago adR ▴ 40
0
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2
replies
1.8k
views
K Means Clustering Two Matrices for ComplexHeatmap
complexheatmap R
5.3 years ago pthom010 • 0
0
votes
2
replies
14k
views
ComplexHeatmap - how to change the position of the legend of rowAnnotation
ComplexHeatmap
updated 6 months ago by ▴ 10 • written 5.5 years ago by • 0
1
vote
6
replies
13k
views
Change fontsize/remove name of annotation ComplexHeatmap package
r rnaseq complexHeatmap annotation
updated 5.5 years ago by ▴ 290 • written 5.5 years ago by ▴ 10
0
votes
1
reply
2.2k
views
ComplexHeatmap's UpSet plots: how to convert a binary matrix into a list of sets
ComplexHeatmap UpSet
5.5 years ago moldach ▴ 20
3
votes
2
replies
3.6k
views
Clustering differentially expressed genes in response to multiple treatments (using edgeR)
edger complexheatmap R clustering
updated 5.6 years ago by 53k • written 5.6 years ago by • 0
0
votes
6
replies
6.3k
views
Error: node stack overflow when trying to plot large dataset using Complexheatmap
Complexheatmap
updated 6.2 years ago by ▴ 290 • written 6.2 years ago by ▴ 110
3
votes
7
replies
4.5k
views
Handle missing values in the z-score matrix while plotting heatmap in the ComplexHeatmap
matrix heatmap ComplexHeatmap missing values R
updated 6.2 years ago by ▴ 290 • written 6.2 years ago by ▴ 10
3
votes
2
replies
8.9k
views
ComplexHeatmap removes row labels if annotation is added
annotation show_row_names complexheatmap
6.4 years ago alexw858 • 0
0
votes
1
reply
1.3k
views
ComplexHeatmap : can't find the arguments inherited from the previous version
ComplexHeatmap
updated 6.6 years ago by ▴ 290 • written 6.6 years ago by ▴ 20
4
votes
3
replies
4.3k
views
Align legends to each heatmap in a ComplexHeatmap with 2 heatmaps
complexheatmap r
updated 6.6 years ago by ▴ 290 • written 6.6 years ago by ▴ 220
0
votes
1
reply
3.6k
views
ComplexHeatmap package will not display heatmaps
ComplexHeatmap software error
updated 6.6 years ago by 68k • written 6.6 years ago by • 0
2
votes
1
reply
5.3k
views
Make UpSet function display numbers above the bars
ComplexHeatmap
updated 6.8 years ago by ▴ 290 • written 6.8 years ago by ▴ 40
0
votes
1
reply
1.7k
views
Error with ComplexHeatmap. Showing only part of image.
Complexheatmap
6.8 years ago Goku • 0
0
votes
2
replies
2.0k
views
ComplexHeatmap column dendrogram
complexheatmap
updated 7.8 years ago by ▴ 200 • written 7.8 years ago by 68k
6
votes
12
replies
15k
views
Combining ComplexHeatmap with other plot types
complexheatmap ggplot2
updated 8.1 years ago by ▴ 290 • written 8.1 years ago by ▴ 10
1
vote
5
replies
11k
views
How to add both row and column labels to Complexheatmap
complexheatmap labels
8.2 years ago dilawerkh4 • 0
0
votes
0
replies
2.2k
views
Problem with heatmap by ComplexHeatmap
complexheatmap Rstudio NOISeq
8.3 years ago Luiz • 0
0
votes
1
reply
3.2k
views
about using the names of the rows and columns in ComplexHeatmap
complexheatmap
8.3 years ago Bogdan ▴ 670
3
votes
2
replies
5.8k
views
Automatic color assignment for annotations on ComplexHeatmap
complexheatmap
8.3 years ago CodeAway ▴ 70
0
votes
0
replies
1.7k
views
Changing row height in ComplexHeatmap
complexheatmap
updated 8.3 years ago by 53k • written 8.3 years ago by • 0
2
votes
3
replies
3.2k
views
about MAFTOOLS and ComplexHeatmap
complexheatmap maftools
updated 8.3 years ago by ▴ 90 • written 8.3 years ago by ▴ 670
0
votes
2
replies
2.3k
views
Extracting subclusters from original data
complexheatmap metabolomics
updated 8.4 years ago by ▴ 130 • written 8.4 years ago by • 0
1
vote
2
replies
3.2k
views
legend with gradient in ComplexHeatmap
complexheatmap
8.4 years ago AR3513 • 0
2
votes
2
replies
1.9k
views
about reshaping a data frame
maftools complexheatmap
updated 8.5 years ago by ▴ 110 • written 8.5 years ago by ▴ 670
0
votes
1
reply
2.0k
views
Oncoprint function in ComplexHeatmap
complexheatmap
8.6 years ago Bogdan ▴ 670
0
votes
5
replies
3.0k
views
Problem trying to decorate a heatmap inside a function
complexheatmap
8.6 years ago AR3513 • 0
0
votes
1
reply
1.5k
views
Error in Heatmap...
complexheatmap
8.8 years ago baranikumar22 • 0
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Answer: NUPOP usage by shepherl 4.2k
You should read the documentation in the package especially the package vignette https://bioconductor.org/packages/release/bioc/html/NuPoP.…
Comment: How can I correctly use phyloseq with Docker? by fnfgame • 0
In a rocker image, this error usually means the Bioconductor install happened as root but the runtime library paths used by the shiny user …
Comment: DECIPHER DesignProbes unable to design FISH-probes by Erik Wright ▴ 150
Are the sequences aligned (i.e., the same width) before running `TileSeqs()`?
Comment: BiocParallel (and DESeq2) - wrong args for environment subassignment by Michael Love 43k
BTW, I tested with no issue on MacOS ARM on our previous github issue.
Answer: DESeq(dds, parallel=TRUE) wrong args for environment subassignment by Michael Love 43k
The DESeq2 error makes sense, as we've talked about, given that the simple `bplapply` isn't working in your setup. Maybe give the traceb…
Votes
C: DESeq2 Following RSEM
Upcoming Ensembl API and data access changes - new blog post available
Comment: Highly similar RNA-seq samples in PCA - pooling or technical duplication?
Answer: Large logFC but somewhat high FDR
Comment: upstream git branches of bioc-release
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