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R slow, using all physical memory and 20GB Virt
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updated 8.9 years ago by 16k • written 8.9 years ago by • 0
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News: Exploiting computational immunology to understand the immune system| Symposium
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Job: Bioinformatician (Quantitative Proteomics / Systems Biology), Germany
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8.9 years ago • updated 8.7 years ago Mario Dejung • 0
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News: New Master of Science in Quantitative and Computational Biology at University of Trento, Italy
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updated 7.8 years ago by • 0 • written 7.9 years ago by ▴ 10
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Job: Post Doctoral position in AI (Deep learning / Machine learning) approaches for Cancer Research, MRC Cancer Unit, University of Cambridge, UK
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Job: Postdoctoral Research Position in Cancer Genomics at Dana-Farber Cancer Institute/Harvard University
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9.5 years ago gcyuan • 0
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Job: Harvard Medical School: Postdoctoral Research Associate position
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9.5 years ago Doe, Aimee ▴ 40
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Job: Research Associate (Postdoctoral) position at the MRC Cancer Unit, University of Cambridge, UK.
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9.5 years ago Shamith.Samarajiwa ▴ 180
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Job: Harvard Medical School Postdoc- The Center for Biomedical Informatics
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9.0 years ago Doe, Aimee ▴ 40
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Job: Postdoctoral/Senior Scientist Position in New York City- Mount Sinai School of Medicine
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8.9 years ago supindab ▴ 10
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Job: Calling all Clinical Genomic Scientist
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8.9 years ago careers • 0
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Job: Research Associate - Cambridge UK - SOUND project - methods for liquid biopsies
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8.9 years ago Andy Lynch ▴ 120
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Job: PhD student and post-doctoral position (computational, molecular medicine)
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8.9 years ago Simon Anders ★ 3.7k
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Job: Post-doc/Senior Scientist in Integrative Genomics: Mount Sinai School of Medicine, New York, NY
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8.7 years ago supindab ▴ 10
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Job: PhD Student in Computational Biology
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8.6 years ago Bernd Fischer ▴ 550
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Job: Job Opening: Computational Biologists in Cambridge, MA and NYC
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8.5 years ago mmartin ▴ 20
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Job: Post-doc Position in Epigenetic Bioinformatics
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8.5 years ago Yassen Assenov ▴ 10
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News: Announcing short course in computational proteomics, May 2-6, 2016, Boston MA
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8.2 years ago Olga Vitek ▴ 40
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Job: Two Post-doctoral Positions at University of Campinas
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7.7 years ago Benilton Carvalho ★ 4.3k
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Job: Bioinformatics Postdocs at Memorial Sloan Kettering Cancer Center in New York
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7.6 years ago weinhold • 0
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Job: Postdoc Positions in Computational Biology, Helmholtz Centre for Infection Research, Braunschweig, Germany
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7.5 years ago cristina della beffa ▴ 30
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Job: Seeking computational biologists with expertise in RNA-Seq and/or statistics at Immuneering Corporation, Cambridge MA and New York NY
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7.5 years ago mmartin ▴ 20
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Job: Job: Senior Scientist, Oncology Translational Research Johnson and Johnson
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5.9 years ago Michael Gormley ▴ 60
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Job: Data Scientist, Mount Sinai School of Medicine, New York, NY USA
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7.5 years ago supindab ▴ 10
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Job: PhD Positions in Computational Cancer Research
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7.4 years ago Bernd Fischer ▴ 550
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Job: Expanding the impact of genomic data on drug development (Immuneering Corporation, Cambridge MA and New York NY)
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7.0 years ago mmartin ▴ 20
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Job: PhD Position for computational scientist in Heidelberg
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7.0 years ago Simon Anders ★ 3.7k
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Job: Computational Biologist position in CRUK Manchester Institute, UK
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6.8 years ago huisun.leong ▴ 10
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Job: PhD computational position - Milan
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6.8 years ago mattia pelizzola ▴ 200
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Job: Post-doc in mathematical modeling on phenotypic evolution and embryonic development
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6.8 years ago isaac.salazar • 0
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Job: Call for Professors and Assistant Professors
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6.7 years ago aaistaustria ▴ 10
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Job: Job: Computational Biologists - Expanding the impact of genomic data on drug development (Immuneering Corporation, Cambridge MA and New York NY)
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6.6 years ago mmartin ▴ 20
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Job: PhD opportunity in Cambridge (Computational Biology and Data Science)
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6.6 years ago • updated 6.5 years ago Shamith.Samarajiwa ▴ 180
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Job: Bioinformatician/Computational Biologist - Dublin City, Ireland
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6.5 years ago bulfin.triona ▴ 10
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Job: Postdoctoral position - Molecular Biologist
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6.4 years ago mattia pelizzola ▴ 200
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Job: APPLIED RESEARCH SCIENTIST II, Cancer Epidemiology dept., Moffitt Cancer Center, Tampa, FL
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6.2 years ago claudia.lopez-matamoros • 0
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Job: Postdoctoral Research Associate (Fixed Term) - Data Scientist / Computational Biologist, University of Cambridge, UK
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6.1 years ago Shamith.Samarajiwa ▴ 180
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Job: Post-doctoral Researcher (3-year) in Computational Biology and Medicine
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6.0 years ago nicole.ykli • 0
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Job: 1 Computational Biologist and 1 Molecular Biologist
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5.5 years ago l.brown ▴ 10
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Job: PhD Positions in Computational Cancer Research at the German Cancer Research Center (DKFZ) in Heidelberg
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5.5 years ago DKFZ International PhD Program ▴ 10
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Job: CRUK Cambridge Centre MRes + PhD in Cancer Biology (Cross-Programme Quantitative Projects)
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5.4 years ago Shamith.Samarajiwa ▴ 180
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Job: applied methods development for single-cell sequencing
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5.4 years ago Simon Anders ★ 3.7k
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Job: PhD Studentship in Computational Biology and Machine Learning @ University of Cambridge (application deadline November 15th 2019)
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4.6 years ago Shamith.Samarajiwa ▴ 180
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986
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Job: Research Assistant/Research Associate in Machine Learning and Computational Biology (fixed-term - closing date is Sunday 20th October 2019) @ Univers…
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4.6 years ago Shamith.Samarajiwa ▴ 180
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Job: Developer/bioinformatician positions at Harvard Medical School
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4.6 years ago Vincent J. Carey, Jr. 6.7k
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Job: Post-Doctoral Research Fellow, Biostatistics, Bioinformatics and Computational Biology - Fred Hutchinson Cancer Research Center - Seattle, WA
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4.6 years ago Fred Hutch (Recruiting) ▴ 40
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Job: Computational Biology & Bioinformatics Postdoctoral Research Associate / Research Assistant (Fixed Term) in (Epi)Genomic Regulation of Cancer @ Unive…
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4.2 years ago Shamith.Samarajiwa ▴ 180
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790
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Job: Bioinformatician-Cancer Biology - Fred Hutchinson Cancer Research Center (Seattle, WA)
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4.2 years ago Fred Hutch (Recruiting) ▴ 40
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Job: Post-Doctoral Research Fellow, Biostatistics - Seattle, WA
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3.9 years ago Fred Hutch (Recruiting) ▴ 40
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Job: Postdoc in Computational Biology
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8.5 years ago Bernd Fischer ▴ 550
50 results • Page 1 of 1
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Comment: Why does GSEA on edgeR results for randomized samples give highly significant p- by Gordon Smyth 50k
Please ask you own question. Inserting your own dataset into someone else's question like this is very impolite. I have already answered m…
Comment: package goseq seems to be not available on the latest version of R by Gordon Smyth 50k
limma most certainly is available. It installs in R 4.4.0 and Bioc 3.19 for all platforms without any issues. It has not had any period of …
Comment: package goseq seems to be not available on the latest version of R by Patrycja ▴ 20
limma package also isn't available.Is there any information when these packages will be available?
Comment: Why does GSEA on edgeR results for randomized samples give highly significant p- by Chris • 0
Thanks Gordon for the advice!
Comment: How to use bootRanges to bootstrap small RNA loci (nullranges package) by Michael Love 41k
Check the number of bootstrapped data per chromosome compared to the original, and then you can also look at its distribution. For this it'…
Votes
Comment: Why does GSEA on edgeR results for randomized samples give highly significant p-
Answer: Why does GSEA on edgeR results for randomized samples give highly significant p-
Handling multiple differential expression comparisons
Answer: fgsea significant result
Answer: fgsea significant result
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