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0
votes
1
answer
61
views
1
answer
404 Not Found error in FELLA
software error fella written 15 days ago by sergi.picart • 10
0
votes
0
answers
12
views
0
answers
GDCprepare error in TCGAbiolinks
differential expression tcgabiolinks gdcprepare written 11 hours ago by fawazfebin • 30
0
votes
2
answers
199
views
2
answers
Inconsistent geo_char for rse_tx
bug recount written 9 months ago by Jacques.van-Helden • 0
3
votes
2
answers
111
views
2
answers
Error in creating BSGenome package
bsgenome written 9 days ago by zen • 0 • updated 1 day ago by James W. MacDonald ♦ 51k
0
votes
0
answers
39
views
0
answers
DEseq2 loading library problem
deseq2 written 1 day ago by shilabr • 0 • updated 1 day ago by Martin Morgan ♦♦ 23k
1
vote
1
answer
44
views
1
answer
How to filter out low read counts
summarizedexperiment written 1 day ago by annkolman78 • 0 • updated 1 day ago by Martin Morgan ♦♦ 23k
0
votes
1
answer
21
views
1
answer
DESeq2 installation issue
deseq2 written 1 day ago by eric.trezel • 0 • updated 1 day ago by Martin Morgan ♦♦ 23k
0
votes
1
answer
34
views
1
answer
DESeq2 analysis with multiple factors
deseq2 deg multiplefactors written 1 day ago by yura.song • 0 • updated 1 day ago by Michael Love ♦ 25k
3
votes
1
answer
29
views
1
answer
Are AH52264, AH66175, and AH70594 duplicates?
annotationhub written 1 day ago by Aditya • 120 • updated 1 day ago by shepherl ♦♦ 1.6k
0
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0
answers
17
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0
answers
How to decided on genes linked by differential binding peaks in opposite conditions.
annotation written 1 day ago by vanhzh • 0
0
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0
answers
25
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0
answers
Job: Post-Doctoral Research Fellow, Biostatistics, Bioinformatics and Computational Biology - Fred Hutchinson Cancer Research Center - Seattle, WA
job computational biology bioinformatics bioconductor biostatistics written 1 day ago by Fred Hutch (Recruiting) • 10
0
votes
1
answer
36
views
1
answer
DESeq2 - lfcShrink reversing sign for all logFCs - clarification on "contrast" argument?
deseq2 written 1 day ago by christopherlhartl • 0 • updated 1 day ago by Michael Love ♦ 25k
1
vote
1
answer
49
views
1
answer
write.table of DESeq2 results broken down by LFC
deseq2 written 2 days ago by rbronste • 60 • updated 2 days ago by Michael Love ♦ 25k
1
vote
0
answers
27
views
0
answers
Polyester's simulate_experiment man pages / vignette description
polyester written 2 days ago by Michael Love ♦ 25k
1
vote
1
answer
42
views
1
answer
Differential gene expression analysis
deseq2 written 2 days ago by rthapa • 0 • updated 2 days ago by Michael Love ♦ 25k
0
votes
1
answer
21
views
1
answer
Cannot put file path in for bam file when attempting to construct a TDS in transcriptR
transcriptr written 2 days ago by jason.williams • 0 • updated 2 days ago by James W. MacDonald ♦ 51k
1
vote
0
answers
57
views
0
answers
Job: PhD Studentship in Computational Biology and Machine Learning @ University of Cambridge (application deadline November 15th 2019)
cancer job computational biology genomics deep learning written 17 days ago by Shamith.Samarajiwa • 180
1
vote
0
answers
112
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0
answers
Job: Research Assistant/Research Associate in Machine Learning and Computational Biology (fixed-term - closing date is Sunday 20th October 2019) @ University of Cambridge
cancer job computational biology deep-learning immunotherapy written 29 days ago by Shamith.Samarajiwa • 180
0
votes
1
answer
23
views
1
answer
DiffBind with paired-end ChIP-seq data
software error written 2 days ago by shen_ • 0 • updated 2 days ago by James W. MacDonald ♦ 51k
1
vote
0
answers
125
views
0
answers
Embedded nul \0 in string with Biostrings::readAAStringSet()
biostrings written 4 months ago by daniel.magnus.bader • 30
1
vote
1
answer
49
views
1
answer
Difference in PCA variance calculation in DESeq2
deseq2 hclust pca written 2 days ago by ag1805x • 20 • updated 2 days ago by Michael Love ♦ 25k
0
votes
0
answers
28
views
0
answers
Pathviews for DE list of genes
rnaseq pathway analysis pathviews written 2 days ago by sofia.lundahl • 0 • updated 2 days ago by Michael Love ♦ 25k
0
votes
0
answers
125
views
0
answers
Annotating GRanges with TxDb gene models using plyranges
plyranges written 3 days ago by Aditya • 120
0
votes
0
answers
17
views
0
answers
(Closed) DEBrowser shiny cannot upload csv files
debrowser written 3 days ago by 15040356701 • 0
0
votes
1
answer
36
views
1
answer
using only uniquely-mapping reads for alternative splicing using SGSeq
sgseq alternative splicing rna seq written 3 days ago by 116100016 • 0 • updated 3 days ago by Leonard Goldstein • 80
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