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scRNA-seq data trained model can be used for predictions on bulk RNA-seq data?
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2 hours ago • updated 1 hour ago Bibi • 0
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ERROR; return code from pthread_create() is 22
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Minor allele data from grch38 giving NAs from getBM ?
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1 day ago • updated 4 hours ago Abiologist • 0
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STRINGdb : error with string_db$plot_network()
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Difference in Contrast in DiffBind
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4 days ago zzrammal • 0
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QSEA- Extraction of Normalized methylation across the samples
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5 days ago Researcher • 0
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How can I create a eigencorplot of pca created from deseq2 object with PCAtools
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5 days ago • updated 2 days ago BioinfGuru ▴ 30
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7
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15 days ago Henry ▴ 10
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16 days ago tholmes • 0
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16 days ago Ian D. ▴ 70
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Differences in differential analysis methods for RNA-Seq
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updated 17 days ago by ★ 4.1k • written 17 days ago by • 0
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17 days ago • updated 15 days ago Chris ▴ 10
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Could we detect difference at pathway level but not significant different at gene level?
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19 days ago Chris ▴ 10
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One error problem occurred caused by data type during using GDCprepare function of TCGAbiolinks to handle TCGAbiolinks BRCA data
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featureCounts reports an error:"featureCounts: input-files.c:2890: SAM_pairer_get_next_read_BIN: Assertion `l_name < 256' failed. Aborted (core dumpe…
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4 weeks ago bocchemistry • 0
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400 results • Page 1 of 8
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Answer: all variables in design formula must be columns in colData (Deseq2) error by ATpoint ★ 4.1k
Your code is poorly readable. Suggest you select and then highlight with markdown using the `10101` button. Generally, colData(dds) must…
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Judging from your MDS plot, cell types 1 and 2 look radically different, so it would make perfect sense to analyse them separately. There's…
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Yes there can be small numerical differences in the estimated quantities because of how the algorithms decide to stop iterating.
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Removing samples from one group nevertheless changes the variance estimation (dispersion) for all comparisons. So you could have pushed one…
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Hi, I'm using Ensembl Plants release 59 with the IWGSC RefSeq v1.1 gene annotation. Thanks a lot for replying so quickly!
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Comment: How can I create a eigencorplot of pca created from deseq2 object with PCAtools
Answer: Importing a GraphNEL into Cytoscape with RCy3 with error: "Error in cyrestPUT(pa
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