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News:
Call for proposals: European CarpentryConnect - 12-14 November 2024, at EMBL Heidelberg
carpentry
conference
10 months ago
Wolfgang Huber
★ 13k
0
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1
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1.1k
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News:
Bioconductor 3.19 Release Schedule
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11 months ago • updated 10 months ago
shepherl
4.1k
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489
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News:
Deadline Extended - BioC2024 Abstracts and Sticker Contest - April 1st!
BioC2024
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Bioconductor
10 months ago
Maria Doyle
▴ 100
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519
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News:
Join BOC Sciences at Drug Discovery Chemistry 2024
DFP
written 11 months ago by
cv.jam.zhxf17875
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1
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548
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Nominations for Bioconductor Awards 2024!
Recognition
Awards
Bioconductor
Bioc2024
11 months ago
shepherl
4.1k
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2
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784
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News:
BioC2024 abstract submission is open!
BioC2024
Conference
Bioconductor
written 11 months ago by
Maria Doyle
▴ 100
0
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0
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493
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News:
Online course: Mass Spectrometry and Proteomics with R/Bioconductor
MSnbase
11 months ago
info
▴ 10
0
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0
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563
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News:
BioC2024 registration is now open!
BioC2024
Conference
Bioconductor
Community
11 months ago
Maria Doyle
▴ 100
2
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0
replies
483
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News:
Upholding our core values: a reminder of the Bioconductor Code of Conduct
Bioconductor
12 months ago
Maria Doyle
▴ 100
0
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0
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845
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News:
Note about packages submitted for Bioconductor 3.19
Release
Submission
release
Bioconductor
12 months ago
shepherl
4.1k
2
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1
reply
530
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News:
"Edit" button not working
Bioconductor
Website
SupportSite
updated 12 months ago by
Lori
• 0 • written 13 months ago by
shepherl
4.1k
0
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0
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520
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News:
2024 May Institute on computation and statistics for mass spectrometry and proteomics
MSstats
MSstatsTMT
MSstatsShiny
MSstatsPTM
12 months ago
kohler.d
• 0
1
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0
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489
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News:
Ensembl 111 has been released
Ensembl
biomaRt
13 months ago
Benjamin
▴ 30
0
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0
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555
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News:
Online course - Flow cytometry data analysis with R/Bioconductor
flowDensity
flowCore
13 months ago
info
▴ 10
3
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618
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News:
Bioconductor.org has a new look!
Bioconductor
Website
written 13 months ago by
shepherl
4.1k
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0
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646
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News:
Online course - FLOW CYTOMETRY DATA ANALYSIS WITH R/BIOCONDUCTOR
Bioconductor
FlowCytometryData
FlowCytometry
14 months ago
info
▴ 10
5
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1
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1.4k
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News:
Bioconductor 3.18 is Released!
Packages
Bioconductor
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written 15 months ago by
shepherl
4.1k
2
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0
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660
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News:
Bioconductor's Transition Away from Twitter/X
Bioconductor
15 months ago
Maria Doyle
▴ 100
0
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0
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529
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News:
CRAN downtime
BiocManager
Bioconductor
15 months ago
shepherl
4.1k
0
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0
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809
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News:
EMBO|EMBL Conference "AI and Biology"
EMBL
Heidelberg
AI
Conference
15 months ago
Wolfgang Huber
★ 13k
0
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0
replies
641
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News:
COURSE - Developing R/Bioconductor Packages for Genomics
Bioconductor
PackageTypeData
PackageType
16 months ago
info
▴ 10
0
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4
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1.5k
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News:
Important Bioconductor Release 3.18 deadlines this week
Release
Devel
release
devel
updated 16 months ago by
Guido Hooiveld
★ 4.1k • written 16 months ago by
shepherl
4.1k
1
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0
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1.1k
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News:
Bioconductor 3.18 db0s, OrgDbs, and TxDbs now available
db0
release
Annotation
16 months ago
kayla.interdonato
▴ 160
0
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0
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1.2k
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News:
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release
17 months ago
shepherl
4.1k
1
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880
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News:
News: BioCAsia2023 Abstract Submission & Registration Now Open!
Events
BioCAsia
Conference
17 months ago
Maria Doyle
▴ 100
0
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0
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696
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News:
Bioconductor.org website new design - We Need Your Input!
Bioconductor
Community
Website
18 months ago
Maria Doyle
▴ 100
0
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0
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14
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Spam:
Spreading Smiles with Group Greeting Cards!
CARNIVAL
18 months ago
carterethan745
0
0
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1
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2.6k
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News:
News:Ensembl 110 has been released
ensembldb
biomaRt
updated 19 months ago by
Michael Love
43k • written 19 months ago by
Benjamin
▴ 30
0
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0
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664
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News:
Reminder: BioC2023 in-person registration closes 19th July!
Bioconductor
BioC2023
Conference
19 months ago
Maria Doyle
▴ 100
0
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0
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828
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News:
Course - Network Analysis in Systems Biology with R/Bioconductor
Bioconductor
Network
RNASeqData
SystemsBiology
19 months ago
info
▴ 10
1
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0
replies
582
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News:
Bioconductor Website Redesign - We Need Your Input!
Bioconductor
Website
20 months ago
shepherl
4.1k
0
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2
replies
1.3k
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News:
List of Deprecated Packages for Bioc3.17
Bioconductor
Deprecation
Devel
devel
22 months ago • updated 20 months ago
shepherl
4.1k
0
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0
replies
533
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News:
May 31st is the last day to nominate for Bioc2023 Awards!
Bioconductor
Awards
Bioc2023
Recognition
20 months ago
shepherl
4.1k
0
votes
0
replies
698
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News:
Reminder: BioC2023, Awards, TAB Deadline approaching - May 31st!
Bioconductor
Community
BioC2023
20 months ago
Maria Doyle
▴ 100
1
vote
0
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812
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News:
Last Week to Nominate for Bioc2023 Awards!
Bioconductor
Bioc2023
Recognition
Awards
21 months ago
shepherl
4.1k
0
votes
0
replies
689
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News:
Junior Developer or New Package Developer Award
Bioconductor
Recognition
Bioc2023
Awards
21 months ago
shepherl
4.1k
0
votes
0
replies
803
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News:
Bioconductor Community Engagement, Outreach, and Diversity Award
Awards
Bioconductor
Bioc2023
Recognition
22 months ago • updated 21 months ago
shepherl
4.1k
0
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0
replies
751
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News:
Bioconductor Long-term Contribution Award
Bioc2023
Bioconductor
Awards
Recognition
21 months ago
shepherl
4.1k
0
votes
0
replies
722
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News:
Nominations for Bioconductor 2023 Awards!
Awards
Bioconductor
Bioc2023
Recognition
22 months ago • updated 21 months ago
shepherl
4.1k
0
votes
0
replies
788
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News:
course - single-cell RNAseq data analysis with R and Bioconductor
Workshop
scRNAseq
21 months ago
info
▴ 10
0
votes
0
replies
1.3k
views
News:
Join the Technical Advisory Board
Bioconductor
News
Organization
21 months ago
Maria Doyle
▴ 100
1
vote
8
replies
1.8k
views
News:
Final List of Deprecated Package Bioc 3.9
deprecation
release
software
experimentData
News
written 5.9 years ago by
shepherl
4.1k
0
votes
0
replies
837
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News:
RNA-seq analysis with Bioconductor Carpentries workshop, Boston, Jul 31-Aug 1
Bioconductor
Event
Community
Training
21 months ago
Maria Doyle
▴ 100
0
votes
0
replies
756
views
News:
Include your Bioconductor tutorial in Smörgåsbord 2023, May 22-26!
Training
Bioconductor
Event
Community
Tutorial
21 months ago
Maria Doyle
▴ 100
0
votes
0
replies
949
views
News:
Bioconductor 3.17 is Released!
Packages
Release
Bioconductor
Software
21 months ago
shepherl
4.1k
1
vote
0
replies
697
views
News:
Bioconductor joins GTN Smörgåsbord online training event, May 22-26, 2023!
Training
Bioconductor
Event
Community
News
21 months ago
Maria Doyle
▴ 100
1
vote
0
replies
1.0k
views
News:
Biological Data Science summer school 11-16 June in Brixen/Bressanone.
csama
22 months ago
Wolfgang Huber
★ 13k
0
votes
0
replies
688
views
News:
Bioconductor Release 3.16 Code Freeze
release
Release
Bioconductor
22 months ago
shepherl
4.1k
0
votes
0
replies
1.1k
views
News:
Bioconductor 3.17 db0s, OrgDbs, and TxDbs now available
release
db0
Annotation
23 months ago
kayla.interdonato
▴ 160
0
votes
1
reply
1.6k
views
News:
BioC2023 abstract submission is now open!
presentation
BioC2023
Conference
community
Bioconductor
updated 6 months ago by
Ramon
• 0 • written 2.0 years ago by
Maria Doyle
▴ 100
530 results • Page
2 of 11
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Replies
Comment: GSVA on RNAseq data
by
Robert Castelo
★ 3.4k
Hi Bob, I have not investigated whether a particular unit of expression works better than others, but using logTPM or logCPM units of expr…
Answer: Store Matrix in DataFrame Cell
by
James W. MacDonald
68k
Put it in a list and put the list in a column.
Comment: For some reason I can't update BiocManager to 3.20
by
James W. MacDonald
68k
Please post output from starting R and then running `sessionInfo()` (as requested by the web form you use to post questions). I get ``` > …
Comment: p-value the same for different contrasts DESeq2
by
caroline.zanchi
• 0
It would be great if it were possible to do something similar using GlmGamPoi !
Comment: Web accessibility of Bioconductor.org
by
Sean Davis
21k
Added issue to website github repo: https://github.com/Bioconductor/bioconductor.org/issues/304
Votes
Answer: Standardization of rlog transformed counts before PCA
Answer: Standardization of rlog transformed counts before PCA
Answer: Standardization of rlog transformed counts before PCA
Answer: Standardization of rlog transformed counts before PCA
A: Rtracklayer fails to export TxDb as GFF3 without CDS
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