Showing : Complexheatmap • reset
8
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1
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9.3k
views
extracting the genes associated with the clusters
heatmap.2 pheatmap complexheatmap heatplus
updated 7.2 years ago by ▴ 680 • written 7.2 years ago by ▴ 670
5
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5
replies
4.2k
views
ComplexHeatmap - Heatmap function within a for loop
ComplexHeatmap for loop Heatmap function
updated 22 months ago by • 0 • written 7.8 years ago by ▴ 40
5
votes
12
replies
10k
views
Combining ComplexHeatmap with other plot types
complexheatmap ggplot2
updated 6.5 years ago by ▴ 260 • written 6.5 years ago by ▴ 10
5
votes
2
replies
13k
views
Complex Heatmap - hide one legend, show 2 - out off three annotations
complexheatmap bioconductor annotation heatmap legend
8.0 years ago • updated 7.9 years ago annkatrin.goepfert ▴ 10
4
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3
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2.9k
views
Align legends to each heatmap in a ComplexHeatmap with 2 heatmaps
complexheatmap r
updated 5.0 years ago by ▴ 260 • written 5.0 years ago by ▴ 210
4
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4
replies
9.3k
views
ComplexHeatmap Scale by Row
ComplexHeatmap heatmap
updated 9.0 years ago by 66k • written 9.0 years ago by ▴ 370
3
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2
replies
4.4k
views
Automatic color assignment for annotations on ComplexHeatmap
complexheatmap
6.7 years ago CodeAway ▴ 70
3
votes
4
replies
6.5k
views
ComplexHeatmap - Annotation without a named vector
complexheatmap
updated 7.8 years ago by ▴ 200 • written 7.8 years ago by ▴ 370
3
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2
replies
18k
views
Plotting several heatmaps onto the same grid with the ComplexHeatmap package in R
complexheatmap
updated 7.7 years ago by ▴ 200 • written 7.7 years ago by ▴ 10
3
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2
replies
6.8k
views
ComplexHeatmap removes row labels if annotation is added
annotation show_row_names complexheatmap
4.8 years ago alexw858 • 0
3
votes
7
replies
3.2k
views
Handle missing values in the z-score matrix while plotting heatmap in the ComplexHeatmap
matrix heatmap ComplexHeatmap missing values R
updated 4.7 years ago by ▴ 260 • written 4.7 years ago by ▴ 10
3
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2
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2.1k
views
Clustering differentially expressed genes in response to multiple treatments (using edgeR)
edger complexheatmap R clustering
updated 4.1 years ago by 50k • written 4.1 years ago by • 0
3
votes
2
replies
2.1k
views
Complex Heatmap shows just one color
Heatmap ComplexHeatmap colorRamp
3.1 years ago Assa Yeroslaviz ★ 1.5k
3
votes
3
replies
3.2k
views
ComplexHeatmap install error
ComplexHeatmap
updated 23 months ago by 66k • written 23 months ago by ▴ 10
3
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4
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3.0k
views
ComplexHeatmap - Default distance and hierarchical clustering methods
ComplexHeatmap Complex
updated 16 months ago by ▴ 40 • written 16 months ago by • 0
2
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3
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2.2k
views
about MAFTOOLS and ComplexHeatmap
complexheatmap maftools
updated 6.8 years ago by ▴ 90 • written 6.8 years ago by ▴ 670
2
votes
3
replies
347
views
ComplexHeatmap: add pch to rowAnnotation when the input is a data frame with variable number of continuous columns
ComplexHeatmap
5 weeks ago daniel.carbajo • 0
2
votes
2
replies
360
views
ComplexHeatmap crashing R session
ComplexHeatmap
3 months ago Felipe • 0
2
votes
1
reply
3.5k
views
Assign custom dendrogram to ComplexHeatmap Heatmap object
complexheatmap heatmap.2 dendrogram dendextend heatmap
updated 7.6 years ago by ▴ 200 • written 7.6 years ago by ▴ 660
2
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2
replies
2.3k
views
ComplexHeatmap: Change font size of annotation axis values
ComplexHeatmap
updated 9 months ago by • 0 • written 22 months ago by ▴ 10
2
votes
1
reply
3.9k
views
Make UpSet function display numbers above the bars
ComplexHeatmap
updated 5.2 years ago by ▴ 260 • written 5.2 years ago by ▴ 40
2
votes
3
replies
1.0k
views
How can I draw a barplot of complexheatmap according 'Tumor Type'
heatma heatmaps ComplexHeatmap
updated 16 months ago by ▴ 40 • written 16 months ago by ▴ 10
2
votes
2
replies
197
views
ComplexHeatmap: change the names of a HeatmapAnnotation object
ComplexHeatmap
5 weeks ago daniel.carbajo • 0
2
votes
4
replies
6.0k
views
Complexheatmap Installation Issue
ComplexHeatmap
3.4 years ago legro.melanie • 0
2
votes
2
replies
1.4k
views
about reshaping a data frame
maftools complexheatmap
updated 6.9 years ago by ▴ 110 • written 6.9 years ago by ▴ 670
2
votes
5
replies
3.4k
views
News: New in DiffBind 3.2: dba.plotProfile() - Peak profiles and profile heatmaps
profileplyr ATACSeq DiffBind ComplexHeatmap ChIPSeq
updated 17 months ago by • 0 • written 3.0 years ago by ★ 5.2k
2
votes
5
replies
1.6k
views
ComplexHeatmap - z-score color coding failed
heatmaps ComplexHeatmap
17 months ago Katharina • 0
2
votes
3
replies
2.3k
views
Complexheatmap row-names not showing up
ComplexHeatmap
23 months ago krushnach80 • 0
1
vote
6
replies
10k
views
Change fontsize/remove name of annotation ComplexHeatmap package
r rnaseq complexHeatmap annotation
updated 3.9 years ago by ▴ 260 • written 3.9 years ago by ▴ 10
1
vote
5
replies
8.8k
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How to add both row and column labels to Complexheatmap
complexheatmap labels
6.7 years ago dilawerkh4 • 0
1
vote
4
replies
4.0k
views
complexHeatmap - distance calculation
complexheatmap
8.3 years ago annkatrin.goepfert ▴ 10
1
vote
1
reply
2.1k
views
ComplexHeatmap: Not able to change the annotations size of the heatmap
ComplexHeatmap Anno Annotation
updated 2.7 years ago by ▴ 260 • written 2.7 years ago by ▴ 10
1
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0
replies
1.0k
views
ComplexHeatmap: Swapping between left_annotation and right_annotation results in a blank space
anno_block ComplexHeatmap left_annotation right_annotation
2.9 years ago glich • 0
1
vote
2
replies
1.9k
views
Error when using multiple heatmaps in ComplexHeatmaps
ComplexHeatmap bug
7.3 years ago brt381 • 0
1
vote
2
replies
2.3k
views
legend with gradient in ComplexHeatmap
complexheatmap
6.9 years ago AR3513 • 0
0
votes
1
reply
1.5k
views
Complex Heatmap - correlation matrix - how to have exact same annotation with same colors for rows and columns?
R heatmaps ComplexHeatmap Heatma
updated 20 months ago by ▴ 260 • written 21 months ago by • 0
0
votes
1
reply
1.1k
views
ComplexHeatmap Legend labels
complexheatmap
7.7 years ago vedran.franke • 0
0
votes
1
reply
1.5k
views
How to manage multiple legends in heatmap_legend_param (ComplexHeatmap) ?
ComplexHeatmap complexheatmap
7.7 years ago g.atla ▴ 10
0
votes
1
reply
1.2k
views
Drawing a HeatMapList while retaining the original row order of each heat map
complexheatmap
updated 7.2 years ago by ★ 13k • written 7.2 years ago by ▴ 150
0
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1
reply
1.1k
views
How to decorate complexheatmap?
complexheatmap
7.9 years ago Hem • 0
0
votes
0
replies
661
views
How to show rownames in densityheatmaps
ComplexHeatmap
3.5 years ago adR ▴ 30
0
votes
5
replies
2.1k
views
Problem trying to decorate a heatmap inside a function
complexheatmap
7.1 years ago AR3513 • 0
0
votes
1
reply
1.5k
views
Oncoprint function in ComplexHeatmap
complexheatmap
7.0 years ago Bogdan ▴ 670
0
votes
2
replies
1.7k
views
Extracting subclusters from original data
complexheatmap metabolomics
updated 6.8 years ago by ▴ 130 • written 6.8 years ago by • 0
0
votes
0
replies
1.2k
views
Changing row height in ComplexHeatmap
complexheatmap
updated 6.7 years ago by 50k • written 6.7 years ago by • 0
0
votes
1
reply
2.4k
views
Complexheatmap question on sorting columns
complexheatmap
8.1 years ago tmcelrath • 0
0
votes
1
reply
1.9k
views
about using the names of the rows and columns in ComplexHeatmap
complexheatmap
6.7 years ago Bogdan ▴ 670
0
votes
0
replies
1.6k
views
Problem with heatmap by ComplexHeatmap
complexheatmap Rstudio NOISeq
6.7 years ago Luiz • 0
0
votes
2
replies
1.6k
views
ComplexHeatmap column dendrogram
complexheatmap
updated 6.2 years ago by ▴ 200 • written 6.2 years ago by 66k
0
votes
1
reply
1.3k
views
Error with ComplexHeatmap. Showing only part of image.
Complexheatmap
5.2 years ago Goku • 0
50 results • Page 1 of 1
Recent ...
Replies
Comment: ChAMP installation issue by shepherl 3.9k
We are still waiting for the goseq to respond to our requests but will take action next week if it is not resolved. ChAMP is currently una…
Comment: How to arrange multiple plots into one page in NOISeq? by baptiste.bidon • 0
Hello everyone, I am new on this site but not a noob in R (I guess). I am facing the same problem. For me, it depends on the NOIseq plot fu…
Comment: ChAMP installation issue by Tahirah • 0
Hello. Could you please share how you managed to install ChAMP in R 4.4.0? I also have R 4.4.0 and Bioconductor 3.19 version and ChAMP fail…
Answer: Identifying DEGs using limma - NanoString GeoMx-NGS RNA Expression Data by James W. MacDonald 66k
Yes, you can use `limma`.
Comment: Ensembl plants at annotationHub? by Johannes Rainer ★ 2.0k
You can get the `EnsDb` EnsDb.Taestivum.v112.sqlite (for Ensembl 112/ ensemblgenomes 59) [here](https://www.dropbox.com/sh/msic0luivbldmb7/…
Votes
how to control age and gender effect in expression data using DESeq2
Answer: Error retrieving ensembl gene id using biomaRt...
Comment: LRT, more than two conditions and pairwise comparisons
Answer: Control group between 2 batches have different expression in RNAseq data
Answer: How to remove batch effect to combine RNAseq data from 2 different experiments?
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Popular Question to Gordon Smyth 50k
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