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•
reset
2
votes
15
replies
3.0k
views
BiSeq trimClusters FDR.loc confusion
biseq
fdr
data
results
9.1 years ago • updated 9.0 years ago
mnaymik
▴ 10
2
votes
4
replies
1.4k
views
edgeR, data processing with some missed values
edger
data
analysis
8.9 years ago
Pau Marc Muñoz Torres
▴ 20
1
vote
2
replies
1.2k
views
about transforming a data.frame
data
8.9 years ago
Bogdan
▴ 670
0
votes
1
reply
1.1k
views
Transform data from MoFlo Astrios
transform
flow cytometry
data
updated 7.3 years ago by
SamGG
▴ 350 • written 7.3 years ago by
cr
• 0
2
votes
4
replies
3.1k
views
exporting limma log2 data
limma
export
log2
data
agilent
updated 9.6 years ago by
James W. MacDonald
65k • written 9.6 years ago by
Jahn Davik
▴ 110
1
vote
2
replies
2.0k
views
data() doesn't work for fcs files?
flowCore
flowjo
data
updated 9.5 years ago by
Greg Finak
▴ 150 • written 9.5 years ago by
AJC
▴ 10
0
votes
1
reply
1.2k
views
Drug datasets for RNA-seq
rna-seq
data
updated 7.4 years ago by
Gordon Smyth
50k • written 7.4 years ago by
bioinformatics
▴ 10
2
votes
1
reply
943
views
Curated Data Package in Bioconductor
package
data
5.7 years ago
divyswar01
• 0
0
votes
3
replies
2.1k
views
[ExpressionSet] Question: Error in validObject(.Object)
ExpressionSet
Assay
NanoString
Error
Data
updated 21 months ago by
James W. MacDonald
65k • written 21 months ago by
junli1988
• 0
0
votes
1
reply
1.2k
views
Help With TCGAbiolinks package
TCGAbiolinks
data
normalize
l
updated 2.8 years ago by
Kevin Blighe
★ 3.9k • written 2.8 years ago by
DANIELA
• 0
0
votes
1
reply
571
views
Data visualization
HELP
Data
updated 20 months ago by
Guido Hooiveld
★ 3.9k • written 20 months ago by
mcclurejenniferc
• 0
0
votes
0
replies
504
views
Prepare data frame of 3 column-lists or matrix of three-column lists from VCF or BAM files
BAM
Segmentation
CINdex
VCF
Data
20 months ago
raven1306
• 0
1
vote
0
replies
551
views
Mapping patient dataset onto control dataset
Cytometry
R
Data
22 months ago
hamiltond
▴ 10
0
votes
0
replies
1.3k
views
OmicCircos: included UCSC.hg19.chr dataframe is actually hg18 cytobands
omiccircos
bug
hg19
hg18
data
7.0 years ago
matthew.bashton
• 0
0
votes
0
replies
710
views
Data for cellGrowth package
cellGrowth
data
6.1 years ago
muitalegal888
• 0
0
votes
0
replies
858
views
Job:
Hiring Bioinformaticians, Data Engineers, & Computer Scientists @ Flagship Labs 77
data
immunology
software
vaccinology
2.7 years ago
Daniel
• 0
1
vote
2
replies
1.9k
views
Dealing With Package Sizes Greater than 5 MB
data
package submission
BiocCheck
4.8 years ago
j.flesch
▴ 10
17 results • Page
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Comment: Mac ARM64 build report for BioC 3.19 from 'kjohnson3' reporting ERROR which it
by
Hervé Pagès
16k
Indeed. Calculations involving floating point arithmetic are architecture-dependent, and testing the results should be done with `all.equal…
Comment: How to use bootRanges to bootstrap small RNA loci (nullranges package)
by
Poonam
• 0
I will follow what you suggested. I didn't use max gap anywhere. I was following statistic I and regarding the size of features, my small…
Comment: How to use bootRanges to bootstrap small RNA loci (nullranges package)
by
Michael Love
41k
Oh I see, for the second question, I don't have a great answer. I typically think of one set as the anchor, whose ascertainment is driving …
Comment: Help with running egsea()
by
James W. MacDonald
65k
Oh, right. Ideally you would use NCBI (aka Entrez gene) IDs because they are way more likely to be unique. Gene symbols are broken down int…
Comment: Help with running egsea()
by
Chris
• 0
Thanks James! I update the question. The last question mean when we use `buildIdx()`, could we use gene symbol instead of entrezID. However…
Votes
Answer: Mac ARM64 build report for BioC 3.19 from 'kjohnson3' reporting ERROR which it
Comment: Help with running egsea()
Answer: Trim/Filter out-of-bounds GRanges
Comment: Help with running egsea()
Answer: How to save the DEXSeq results
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Malcolm Cook
★ 1.6k
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priyanka.m
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